RNA–Protein interactions for RNA: ENSMUST00000033158.5

Ubfd1-201, Transcript of Ubiquitin domain-containing protein UBFD1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ubfd1, Length 4,849 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubfd1-201ENSMUST00000033158 AdarQ99MU3 1178 aaKnown RBP17.99■□□□□ 0.47
Ubfd1-201ENSMUST00000033158 Lins1Q3U1D0 764 aa17.98■□□□□ 0.47
Ubfd1-201ENSMUST00000033158 Ehd2Q8BH64 543 aa17.98■□□□□ 0.47
Ubfd1-201ENSMUST00000033158 Rcn2Q8BP92 320 aa17.98■□□□□ 0.47
Ubfd1-201ENSMUST00000033158 Sgsm1Q8BPQ7 1093 aa17.98■□□□□ 0.47
Ubfd1-201ENSMUST00000033158 Fam161bQ8CB59 589 aa17.98■□□□□ 0.47
Ubfd1-201ENSMUST00000033158 Ppp4r1Q8K2V1 951 aa17.98■□□□□ 0.47
Ubfd1-201ENSMUST00000033158 Smc6Q924W5 1097 aa17.98■□□□□ 0.47
Ubfd1-201ENSMUST00000033158 ErmardE9Q048 622 aa17.98■□□□□ 0.47
Ubfd1-201ENSMUST00000033158 Sec24cG3X972 1096 aaKnown RBP17.98■□□□□ 0.47
Ubfd1-201ENSMUST00000033158 Actn4P57780 912 aaKnown RBP17.98■□□□□ 0.47
Ubfd1-201ENSMUST00000033158 Ccdc84Q4VA36 332 aaKnown RBP17.98■□□□□ 0.47
Ubfd1-201ENSMUST00000033158 Dync1li2Q6PDL0 492 aaKnown RBP17.98■□□□□ 0.47
Ubfd1-201ENSMUST00000033158 Prpf6Q91YR7 941 aaKnown RBP17.98■□□□□ 0.47
Ubfd1-201ENSMUST00000033158 Ppp2r3dQ9Z176 491 aa17.98■□□□□ 0.47
Ubfd1-201ENSMUST00000033158 Srrm1Q52KI8 946 aaKnown RBP17.98■□□□□ 0.47
Ubfd1-201ENSMUST00000033158 Serpinb13Q8CDC0 389 aa17.98■□□□□ 0.47
Ubfd1-201ENSMUST00000033158 Fbxo18Q8K2I9 1042 aa17.98■□□□□ 0.47
Ubfd1-201ENSMUST00000033158 Tmem47Q9JJG6 181 aa17.98■□□□□ 0.47
Ubfd1-201ENSMUST00000033158 Magi2Q9WVQ1 1275 aa17.98■□□□□ 0.47
Ubfd1-201ENSMUST00000033158 Ccnyl1D3YUJ3 367 aa17.98■□□□□ 0.47
Ubfd1-201ENSMUST00000033158 Gucy2eP52785 1108 aa17.98■□□□□ 0.47
Ubfd1-201ENSMUST00000033158 Hoxa13Q62424 386 aa17.98■□□□□ 0.47
Ubfd1-201ENSMUST00000033158 E330017A01RikQ8BU47 192 aa17.98■□□□□ 0.47
Ubfd1-201ENSMUST00000033158 Rpap2Q8VC34 614 aa17.98■□□□□ 0.47
Ubfd1-201ENSMUST00000033158 Ces1dQ8VCT4 565 aa17.98■□□□□ 0.47
Ubfd1-201ENSMUST00000033158 Dhx58Q99J87 678 aa17.98■□□□□ 0.47
Ubfd1-201ENSMUST00000033158 MlxiplQ99MZ3 864 aa17.98■□□□□ 0.47
Ubfd1-201ENSMUST00000033158 Rps6ka4Q9Z2B9 773 aa17.98■□□□□ 0.47
Ubfd1-201ENSMUST00000033158 Mageb2A2AHM0 380 aa17.97■□□□□ 0.47
Ubfd1-201ENSMUST00000033158 NyxP83503 476 aa17.97■□□□□ 0.47
Ubfd1-201ENSMUST00000033158 SpertQ32MG2 446 aa17.97■□□□□ 0.47
Ubfd1-201ENSMUST00000033158 Mum1l1Q4VA55 681 aa17.97■□□□□ 0.47
Ubfd1-201ENSMUST00000033158 Tmco4Q91WU4 631 aa17.97■□□□□ 0.47
Ubfd1-201ENSMUST00000033158 Dusp10Q9ESS0 483 aa17.97■□□□□ 0.47
Ubfd1-201ENSMUST00000033158 Hps5P59438 1126 aa17.97■□□□□ 0.47
Ubfd1-201ENSMUST00000033158 Zc3h18Q0P678 948 aaKnown RBP17.97■□□□□ 0.47
Ubfd1-201ENSMUST00000033158 Myo1gQ5SUA5 1024 aa17.97■□□□□ 0.47
Ubfd1-201ENSMUST00000033158 SrlQ7TQ48 910 aa17.97■□□□□ 0.47
Ubfd1-201ENSMUST00000033158 Rcan1Q9JHG6 198 aa17.97■□□□□ 0.47
Ubfd1-201ENSMUST00000033158 CatspereP0DP43 985 aa17.97■□□□□ 0.47
Ubfd1-201ENSMUST00000033158 Qrich1Q3UA37 777 aa17.97■□□□□ 0.47
Ubfd1-201ENSMUST00000033158 Gm4981Q3ULJ8 291 aa17.97■□□□□ 0.47
Ubfd1-201ENSMUST00000033158 Ccdc160Q3UYG1 323 aa17.97■□□□□ 0.47
Ubfd1-201ENSMUST00000033158 Trim66Q924W6 1242 aa17.97■□□□□ 0.47
Ubfd1-201ENSMUST00000033158 Ddx25Q9QY15 484 aa17.97■□□□□ 0.47
Ubfd1-201ENSMUST00000033158 Diaph3Q9Z207 1171 aa17.97■□□□□ 0.47
Ubfd1-201ENSMUST00000033158 Ppfia4B8QI36 1187 aa17.97■□□□□ 0.47
Ubfd1-201ENSMUST00000033158 Slc9a2Q3ZAS0 814 aa17.97■□□□□ 0.47
Ubfd1-201ENSMUST00000033158 AlcamQ61490 583 aa17.97■□□□□ 0.47
Ubfd1-201ENSMUST00000033158 Nuak1Q641K5 658 aa17.97■□□□□ 0.47
Ubfd1-201ENSMUST00000033158 Ankrd6Q69ZU8 712 aa17.97■□□□□ 0.47
Ubfd1-201ENSMUST00000033158 Efcab14Q8BGQ6 484 aa17.97■□□□□ 0.47
Ubfd1-201ENSMUST00000033158 Rint1Q8BZ36 792 aa17.97■□□□□ 0.47
Ubfd1-201ENSMUST00000033158 1700016D06RikQ9DAA5 166 aa17.97■□□□□ 0.47
Ubfd1-201ENSMUST00000033158 Kcnq5Q9JK45 933 aa17.97■□□□□ 0.47
Ubfd1-201ENSMUST00000033158 Dach1Q9QYB2 751 aa17.97■□□□□ 0.47
Ubfd1-201ENSMUST00000033158 Klhl34A2AI76 644 aa17.96■□□□□ 0.47
Ubfd1-201ENSMUST00000033158 Ccdc175E9PVB3 822 aa17.96■□□□□ 0.47
Ubfd1-201ENSMUST00000033158 Stk10O55098 966 aa17.96■□□□□ 0.47
Ubfd1-201ENSMUST00000033158 Casp2P29594 452 aa17.96■□□□□ 0.47
Ubfd1-201ENSMUST00000033158 Dpcr1Q3TNW5 500 aa17.96■□□□□ 0.47
Ubfd1-201ENSMUST00000033158 Gm6657A0A1B0GRJ3 277 aa17.96■□□□□ 0.47
Ubfd1-201ENSMUST00000033158 Dnaaf5B9EJR8 853 aa17.96■□□□□ 0.47
Ubfd1-201ENSMUST00000033158 Gucy2cQ3UWA6 1072 aa17.96■□□□□ 0.47
Ubfd1-201ENSMUST00000033158 Spata21Q8BHW6 681 aa17.96■□□□□ 0.47
Ubfd1-201ENSMUST00000033158 Mdh1P14152 334 aa17.96■□□□□ 0.47
Ubfd1-201ENSMUST00000033158 Zdhhc9P59268 364 aa17.96■□□□□ 0.47
Ubfd1-201ENSMUST00000033158 NxnP97346 435 aa17.96■□□□□ 0.47
Ubfd1-201ENSMUST00000033158 Ubxn10Q8BG34 277 aa17.96■□□□□ 0.47
Ubfd1-201ENSMUST00000033158 Parp10Q8CIE4 960 aa17.96■□□□□ 0.47
Ubfd1-201ENSMUST00000033158 CtsqQ91ZF4 343 aa17.96■□□□□ 0.47
Ubfd1-201ENSMUST00000033158 Tgs1Q923W1 853 aa17.96■□□□□ 0.47
Ubfd1-201ENSMUST00000033158 Akt3Q9WUA6 479 aa17.96■□□□□ 0.47
Ubfd1-201ENSMUST00000033158 Slfn1Q9Z0I7 337 aa17.96■□□□□ 0.47
Ubfd1-201ENSMUST00000033158 4933406M09RikG3XA12 479 aa17.96■□□□□ 0.46
Ubfd1-201ENSMUST00000033158 AK157302I3ITR1 129 aa17.96■□□□□ 0.46
Ubfd1-201ENSMUST00000033158 Pcdhb14Q6PB90 796 aa17.96■□□□□ 0.46
Ubfd1-201ENSMUST00000033158 Otop3Q80UF9 577 aa17.96■□□□□ 0.46
Ubfd1-201ENSMUST00000033158 Taf7lQ9D3R9 471 aa17.96■□□□□ 0.46
Ubfd1-201ENSMUST00000033158 Isca1Q9D924 129 aa17.96■□□□□ 0.46
Ubfd1-201ENSMUST00000033158 Eif2ak1Q9Z2R9 619 aa17.96■□□□□ 0.46
Ubfd1-201ENSMUST00000033158 ItkQ03526 625 aa17.95■□□□□ 0.46
Ubfd1-201ENSMUST00000033158 Znf532Q6NXK2 1036 aa17.95■□□□□ 0.46
Ubfd1-201ENSMUST00000033158 Serpinb3dQ6UKZ0 387 aa17.95■□□□□ 0.46
Ubfd1-201ENSMUST00000033158 Alpk1Q9CXB8 1231 aa17.95■□□□□ 0.46
Ubfd1-201ENSMUST00000033158 Rfc4Q99J62 364 aa17.95■□□□□ 0.46
Ubfd1-201ENSMUST00000033158 Snx1Q9WV80 522 aa17.95■□□□□ 0.46
Ubfd1-201ENSMUST00000033158 Stat4P42228 749 aa17.95■□□□□ 0.46
Ubfd1-201ENSMUST00000033158 Stat2Q9WVL2 923 aa17.95■□□□□ 0.46
Ubfd1-201ENSMUST00000033158 Myo3bQ1EG27 1305 aa17.95■□□□□ 0.46
Ubfd1-201ENSMUST00000033158 Vmn2r79E9Q067 851 aa17.95■□□□□ 0.46
Ubfd1-201ENSMUST00000033158 Nck2O55033 380 aa17.95■□□□□ 0.46
Ubfd1-201ENSMUST00000033158 Ctnnd1P30999 938 aaKnown RBP17.95■□□□□ 0.46
Ubfd1-201ENSMUST00000033158 Nr5a1P33242 462 aa17.94■□□□□ 0.46
Ubfd1-201ENSMUST00000033158 Cep126Q0VBV7 1103 aa17.94■□□□□ 0.46
Ubfd1-201ENSMUST00000033158 Q66JV7 365 aa17.94■□□□□ 0.46
Ubfd1-201ENSMUST00000033158 AmphQ7TQF7 686 aa17.94■□□□□ 0.46
Ubfd1-201ENSMUST00000033158 Prpsap2Q8R574 369 aa17.94■□□□□ 0.46
Ubfd1-201ENSMUST00000033158 Mrps22Q9CXW2 359 aa17.94■□□□□ 0.46
Retrieved 100 of 22,080 RNA–protein pairs in 20 ms