RNA–Protein interactions for RNA: ENSMUST00000031628.9

Ptcd1-201, Transcript of Pentatricopeptide repeat-containing protein 1, mitochondrial, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ptcd1, Length 3,087 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ptcd1-201ENSMUST00000031628 Syf2Q9D198 242 aaKnown RBP11.78□□□□□ -0.52
Ptcd1-201ENSMUST00000031628 Ndst4Q9EQW8 872 aa11.78□□□□□ -0.52
Ptcd1-201ENSMUST00000031628 IkQ9Z1M8 557 aaKnown RBP11.78□□□□□ -0.52
Ptcd1-201ENSMUST00000031628 Arfgef1G3X9K3 1846 aaKnown RBP11.78□□□□□ -0.52
Ptcd1-201ENSMUST00000031628 Pcdh11xF6ZNL5 1338 aa11.77□□□□□ -0.52
Ptcd1-201ENSMUST00000031628 Ltn1Q6A009 1767 aa11.77□□□□□ -0.52
Ptcd1-201ENSMUST00000031628 Vmn2r71L7N2D8 855 aa11.77□□□□□ -0.53
Ptcd1-201ENSMUST00000031628 Vars2Q3U2A8 1060 aa11.77□□□□□ -0.53
Ptcd1-201ENSMUST00000031628 Kiaa0319Q5SZV5 1081 aa11.77□□□□□ -0.53
Ptcd1-201ENSMUST00000031628 Large2Q5XPT3 690 aa11.77□□□□□ -0.53
Ptcd1-201ENSMUST00000031628 Serpinb6Q60854 378 aa11.77□□□□□ -0.53
Ptcd1-201ENSMUST00000031628 Kcnj11Q61743 390 aa11.77□□□□□ -0.53
Ptcd1-201ENSMUST00000031628 Pim2Q62070 370 aa11.77□□□□□ -0.53
Ptcd1-201ENSMUST00000031628 Col11a2Q64739 1736 aa11.77□□□□□ -0.53
Ptcd1-201ENSMUST00000031628 Olfr832Q7TRG9 312 aa11.77□□□□□ -0.53
Ptcd1-201ENSMUST00000031628 NkrfQ8BY02 690 aaKnown RBP11.77□□□□□ -0.53
Ptcd1-201ENSMUST00000031628 Dennd2aQ8C4S8 1000 aa11.77□□□□□ -0.53
Ptcd1-201ENSMUST00000031628 Krt222Q8CCX5 294 aa11.77□□□□□ -0.53
Ptcd1-201ENSMUST00000031628 Ccdc43Q9CR29 222 aaKnown RBP11.77□□□□□ -0.53
Ptcd1-201ENSMUST00000031628 TbcbQ9D1E6 244 aa11.77□□□□□ -0.53
Ptcd1-201ENSMUST00000031628 Tacc2Q9JJG0 1149 aa11.77□□□□□ -0.53
Ptcd1-201ENSMUST00000031628 Arl6ip4Q9JM93 229 aa11.77□□□□□ -0.53
Ptcd1-201ENSMUST00000031628 Lbhd1A0A087WPA0 259 aa11.77□□□□□ -0.53
Ptcd1-201ENSMUST00000031628 Vmn2r68L7N2B3 851 aa11.77□□□□□ -0.53
Ptcd1-201ENSMUST00000031628 Ppp4cP97470 307 aa11.77□□□□□ -0.53
Ptcd1-201ENSMUST00000031628 Ddx3yQ62095 658 aaKnown RBP11.77□□□□□ -0.53
Ptcd1-201ENSMUST00000031628 Krt87Q6IMF0 495 aa11.77□□□□□ -0.53
Ptcd1-201ENSMUST00000031628 Cep70Q6IQY5 616 aa11.77□□□□□ -0.53
Ptcd1-201ENSMUST00000031628 Ppp1r11Q8K1L5 131 aa11.77□□□□□ -0.53
Ptcd1-201ENSMUST00000031628 Mtmr4Q91XS1 1190 aa11.77□□□□□ -0.53
Ptcd1-201ENSMUST00000031628 Krt34Q9D646 392 aa11.77□□□□□ -0.53
Ptcd1-201ENSMUST00000031628 Sept14Q9DA97 430 aa11.77□□□□□ -0.53
Ptcd1-201ENSMUST00000031628 Tlr9Q9EQU3 1032 aa11.77□□□□□ -0.53
Ptcd1-201ENSMUST00000031628 Tmem191cQ9JJB1 302 aa11.77□□□□□ -0.53
Ptcd1-201ENSMUST00000031628 Kank3Q9Z1P7 791 aa11.77□□□□□ -0.53
Ptcd1-201ENSMUST00000031628 Bpifb4A2BGH0 617 aa11.76□□□□□ -0.53
Ptcd1-201ENSMUST00000031628 LdhaP06151 332 aaKnown RBP11.76□□□□□ -0.53
Ptcd1-201ENSMUST00000031628 Pcif1P59114 706 aa11.76□□□□□ -0.53
Ptcd1-201ENSMUST00000031628 Psd3Q2PFD7 1037 aa11.76□□□□□ -0.53
Ptcd1-201ENSMUST00000031628 1810065E05RikQ5NC41 235 aa11.76□□□□□ -0.53
Ptcd1-201ENSMUST00000031628 Fam183bQ5NC57 135 aa11.76□□□□□ -0.53
Ptcd1-201ENSMUST00000031628 AsnsQ61024 561 aa11.76□□□□□ -0.53
Ptcd1-201ENSMUST00000031628 LnpkQ7TQ95 425 aa11.76□□□□□ -0.53
Ptcd1-201ENSMUST00000031628 Bcas3Q8CCN5 928 aa11.76□□□□□ -0.53
Ptcd1-201ENSMUST00000031628 Usp27Q8CEG8 438 aa11.76□□□□□ -0.53
Ptcd1-201ENSMUST00000031628 Golph3Q9CRA5 298 aa11.76□□□□□ -0.53
Ptcd1-201ENSMUST00000031628 NapaQ9DB05 295 aa11.76□□□□□ -0.53
Ptcd1-201ENSMUST00000031628 Klra17Q9JMA4 273 aa11.76□□□□□ -0.53
Ptcd1-201ENSMUST00000031628 ThegQ9JMB1 375 aa11.76□□□□□ -0.53
Ptcd1-201ENSMUST00000031628 Setd4P58467 439 aa11.76□□□□□ -0.53
Ptcd1-201ENSMUST00000031628 Nlrp2Q4PLS0 1046 aaKnown RBP11.76□□□□□ -0.53
Ptcd1-201ENSMUST00000031628 Elf1Q60775 612 aa11.76□□□□□ -0.53
Ptcd1-201ENSMUST00000031628 PigsQ6PD26 555 aaKnown RBP11.76□□□□□ -0.53
Ptcd1-201ENSMUST00000031628 Lrrn2Q6PHP6 730 aa11.76□□□□□ -0.53
Ptcd1-201ENSMUST00000031628 Atxn7Q8R4I1 867 aa11.76□□□□□ -0.53
Ptcd1-201ENSMUST00000031628 EpgnQ924X1 152 aa11.76□□□□□ -0.53
Ptcd1-201ENSMUST00000031628 GabreA2AMW3 916 aa11.75□□□□□ -0.53
Ptcd1-201ENSMUST00000031628 Chrna9G3X8Z7 479 aa11.75□□□□□ -0.53
Ptcd1-201ENSMUST00000031628 Ighmbp2P40694 993 aa11.75□□□□□ -0.53
Ptcd1-201ENSMUST00000031628 Sema4bQ62179 823 aa11.75□□□□□ -0.53
Ptcd1-201ENSMUST00000031628 Dhx37Q6NZL1 1150 aa11.75□□□□□ -0.53
Ptcd1-201ENSMUST00000031628 Nek5Q7TSC3 627 aa11.75□□□□□ -0.53
Ptcd1-201ENSMUST00000031628 Tcp10aQ80W76 438 aa11.75□□□□□ -0.53
Ptcd1-201ENSMUST00000031628 Rassf10Q8BL43 508 aa11.75□□□□□ -0.53
Ptcd1-201ENSMUST00000031628 Dnajc19Q9CQV7 116 aa11.75□□□□□ -0.53
Ptcd1-201ENSMUST00000031628 Stx17Q9D0I4 301 aa11.75□□□□□ -0.53
Ptcd1-201ENSMUST00000031628 Frmpd4A2AFR3 1320 aa11.75□□□□□ -0.53
Ptcd1-201ENSMUST00000031628 Zc3h4Q6ZPZ3 1304 aaKnown RBP11.75□□□□□ -0.53
Ptcd1-201ENSMUST00000031628 Ltbp2O08999 1813 aa11.75□□□□□ -0.53
Ptcd1-201ENSMUST00000031628 Grik3B1AS29 919 aa11.75□□□□□ -0.53
Ptcd1-201ENSMUST00000031628 Ces1aE9PYP1 563 aa11.75□□□□□ -0.53
Ptcd1-201ENSMUST00000031628 1700122O11RikJ3QPW6 241 aa11.75□□□□□ -0.53
Ptcd1-201ENSMUST00000031628 Tlr11Q6R5P0 926 aa11.75□□□□□ -0.53
Ptcd1-201ENSMUST00000031628 Rps6ka6Q7TPS0 764 aa11.75□□□□□ -0.53
Ptcd1-201ENSMUST00000031628 Ankrd24Q80VM7 985 aa11.75□□□□□ -0.53
Ptcd1-201ENSMUST00000031628 Ddx19bQ8BZY3 494 aa11.75□□□□□ -0.53
Ptcd1-201ENSMUST00000031628 Krt79Q8VED5 531 aa11.75□□□□□ -0.53
Ptcd1-201ENSMUST00000031628 Creb3l3Q91XE9 479 aa11.75□□□□□ -0.53
Ptcd1-201ENSMUST00000031628 St5Q924W7 1134 aa11.75□□□□□ -0.53
Ptcd1-201ENSMUST00000031628 Josd2Q9CR30 188 aa11.75□□□□□ -0.53
Ptcd1-201ENSMUST00000031628 Galnt15Q9D2N8 638 aa11.75□□□□□ -0.53
Ptcd1-201ENSMUST00000031628 Efhd1Q9D4J1 240 aa11.75□□□□□ -0.53
Ptcd1-201ENSMUST00000031628 JcadQ5DTX6 1320 aa11.75□□□□□ -0.53
Ptcd1-201ENSMUST00000031628 Dock5B2RY04 1868 aa11.75□□□□□ -0.53
Ptcd1-201ENSMUST00000031628 Dnajc21E9Q8D0 531 aa11.75□□□□□ -0.53
Ptcd1-201ENSMUST00000031628 Sec24cG3X972 1096 aaKnown RBP11.75□□□□□ -0.53
Ptcd1-201ENSMUST00000031628 Zfp408H7BX78 710 aa11.75□□□□□ -0.53
Ptcd1-201ENSMUST00000031628 Herc4Q6PAV2 1057 aa11.75□□□□□ -0.53
Ptcd1-201ENSMUST00000031628 Ddx42Q810A7 929 aaKnown RBP11.75□□□□□ -0.53
Ptcd1-201ENSMUST00000031628 Thap3Q8BJ25 218 aa11.75□□□□□ -0.53
Ptcd1-201ENSMUST00000031628 Skor1Q8BX46 964 aa11.75□□□□□ -0.53
Ptcd1-201ENSMUST00000031628 Rcor2Q8C796 523 aa11.75□□□□□ -0.53
Ptcd1-201ENSMUST00000031628 Arhgef6Q8K4I3 771 aa11.75□□□□□ -0.53
Ptcd1-201ENSMUST00000031628 1700020D05RikQ99PB1 294 aa11.75□□□□□ -0.53
Ptcd1-201ENSMUST00000031628 Alpk1Q9CXB8 1231 aa11.75□□□□□ -0.53
Ptcd1-201ENSMUST00000031628 Serpinb12Q9D7P9 423 aa11.75□□□□□ -0.53
Ptcd1-201ENSMUST00000031628 CoasyQ9DBL7 563 aa11.75□□□□□ -0.53
Ptcd1-201ENSMUST00000031628 Ppp1r12aQ9DBR7 1029 aaKnown RBP11.75□□□□□ -0.53
Ptcd1-201ENSMUST00000031628 Odf2A3KGV1 830 aaKnown RBP11.74□□□□□ -0.53
Ptcd1-201ENSMUST00000031628 Nfxl1E9Q8I7 918 aaKnown RBP11.74□□□□□ -0.53
Retrieved 100 of 22,080 RNA–protein pairs in 15.2 ms