RNA–Protein interactions for RNA: ENSMUST00000029941.15

Pdlim5-201, Transcript of PDZ and LIM domain protein 5, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Pdlim5, Length 5,016 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim5-201ENSMUST00000029941 Mon2Q80TL7 1715 aa13.49□□□□□ -0.25
Pdlim5-201ENSMUST00000029941 Ccdc24E9PUW8 296 aa13.49□□□□□ -0.25
Pdlim5-201ENSMUST00000029941 AgtP11859 477 aa13.49□□□□□ -0.25
Pdlim5-201ENSMUST00000029941 Pth1rP41593 591 aa13.49□□□□□ -0.25
Pdlim5-201ENSMUST00000029941 Dpcr1Q3TNW5 500 aa13.49□□□□□ -0.25
Pdlim5-201ENSMUST00000029941 Mars2Q499X9 586 aaKnown RBP13.49□□□□□ -0.25
Pdlim5-201ENSMUST00000029941 PigsQ6PD26 555 aaKnown RBP13.49□□□□□ -0.25
Pdlim5-201ENSMUST00000029941 Kctd6Q8BNL5 237 aa13.49□□□□□ -0.25
Pdlim5-201ENSMUST00000029941 Synpo2Q91YE8 1087 aaKnown RBP13.49□□□□□ -0.25
Pdlim5-201ENSMUST00000029941 3830403N18RikQ9D6C3 208 aa13.49□□□□□ -0.25
Pdlim5-201ENSMUST00000029941 Krt7Q9DCV7 457 aa13.49□□□□□ -0.25
Pdlim5-201ENSMUST00000029941 Trp53inp1Q9QXE4 239 aa13.49□□□□□ -0.25
Pdlim5-201ENSMUST00000029941 Slfn1Q9Z0I7 337 aa13.49□□□□□ -0.25
Pdlim5-201ENSMUST00000029941 Adgrb1Q3UHD1 1582 aa13.49□□□□□ -0.25
Pdlim5-201ENSMUST00000029941 Ric1Q69ZJ7 1422 aa13.49□□□□□ -0.25
Pdlim5-201ENSMUST00000029941 Atp2a2O55143 1044 aaKnown RBP13.49□□□□□ -0.25
Pdlim5-201ENSMUST00000029941 Krt13P08730 437 aa13.49□□□□□ -0.25
Pdlim5-201ENSMUST00000029941 LdhbP16125 334 aaKnown RBP13.49□□□□□ -0.25
Pdlim5-201ENSMUST00000029941 Rasa3Q60790 834 aa13.49□□□□□ -0.25
Pdlim5-201ENSMUST00000029941 Meis1Q60954 390 aa13.49□□□□□ -0.25
Pdlim5-201ENSMUST00000029941 Bpifb6Q8BU51 449 aa13.49□□□□□ -0.25
Pdlim5-201ENSMUST00000029941 MesdQ9ERE7 224 aa13.49□□□□□ -0.25
Pdlim5-201ENSMUST00000029941 Ercc4Q9QZD4 917 aa13.49□□□□□ -0.25
Pdlim5-201ENSMUST00000029941 DohhA0A1Y7VJ29 135 aa13.49□□□□□ -0.25
Pdlim5-201ENSMUST00000029941 Bfsp1A2AMT1 669 aa13.49□□□□□ -0.25
Pdlim5-201ENSMUST00000029941 Sclt1G5E861 688 aa13.49□□□□□ -0.25
Pdlim5-201ENSMUST00000029941 Vmn2r78K7N6U5 853 aa13.49□□□□□ -0.25
Pdlim5-201ENSMUST00000029941 Mrps31Q61733 384 aaKnown RBP13.49□□□□□ -0.25
Pdlim5-201ENSMUST00000029941 Sestd1Q80UK0 696 aa13.49□□□□□ -0.25
Pdlim5-201ENSMUST00000029941 Spice1Q8C804 860 aa13.49□□□□□ -0.25
Pdlim5-201ENSMUST00000029941 Plcg2Q8CIH5 1265 aa13.49□□□□□ -0.25
Pdlim5-201ENSMUST00000029941 Fam133bQ9CVI2 245 aaKnown RBP13.49□□□□□ -0.25
Pdlim5-201ENSMUST00000029941 Setd4P58467 439 aa13.48□□□□□ -0.25
Pdlim5-201ENSMUST00000029941 Vps33bP59016 617 aa13.48□□□□□ -0.25
Pdlim5-201ENSMUST00000029941 Hps5P59438 1126 aa13.48□□□□□ -0.25
Pdlim5-201ENSMUST00000029941 Mcl1P97287 331 aa13.48□□□□□ -0.25
Pdlim5-201ENSMUST00000029941 Efcab14Q8BGQ6 484 aa13.48□□□□□ -0.25
Pdlim5-201ENSMUST00000029941 Tnpo2Q99LG2 887 aaKnown RBP13.48□□□□□ -0.25
Pdlim5-201ENSMUST00000029941 H2-OaQ9QWV1 250 aa13.48□□□□□ -0.25
Pdlim5-201ENSMUST00000029941 Gfpt2Q9Z2Z9 682 aa13.48□□□□□ -0.25
Pdlim5-201ENSMUST00000029941 P4hbP09103 509 aaKnown RBP13.48□□□□□ -0.25
Pdlim5-201ENSMUST00000029941 Calb1P12658 261 aa13.48□□□□□ -0.25
Pdlim5-201ENSMUST00000029941 Art2aP17981 287 aa13.48□□□□□ -0.25
Pdlim5-201ENSMUST00000029941 Gjb6P70689 261 aa13.48□□□□□ -0.25
Pdlim5-201ENSMUST00000029941 Tbx2Q60707 711 aa13.48□□□□□ -0.25
Pdlim5-201ENSMUST00000029941 Sh3gl1Q62419 368 aa13.48□□□□□ -0.25
Pdlim5-201ENSMUST00000029941 Rhobtb3Q9CTN4 611 aa13.48□□□□□ -0.25
Pdlim5-201ENSMUST00000029941 Aox3G3X982 1335 aa13.48□□□□□ -0.25
Pdlim5-201ENSMUST00000029941 Rexo5D3YW29 759 aa13.48□□□□□ -0.25
Pdlim5-201ENSMUST00000029941 Trove2O08848 538 aa13.48□□□□□ -0.25
Pdlim5-201ENSMUST00000029941 Tmem232Q5K6N0 675 aa13.48□□□□□ -0.25
Pdlim5-201ENSMUST00000029941 Rab44Q8CB87 725 aa13.48□□□□□ -0.25
Pdlim5-201ENSMUST00000029941 Grtp1Q9D3N8 359 aa13.48□□□□□ -0.25
Pdlim5-201ENSMUST00000029941 Fermt1P59113 677 aa13.48□□□□□ -0.25
Pdlim5-201ENSMUST00000029941 Tlr13Q6R5N8 991 aa13.48□□□□□ -0.25
Pdlim5-201ENSMUST00000029941 Kcnv2Q8CFS6 562 aa13.48□□□□□ -0.25
Pdlim5-201ENSMUST00000029941 Scrn1Q9CZC8 414 aa13.48□□□□□ -0.25
Pdlim5-201ENSMUST00000029941 Sept12Q9D451 317 aa13.48□□□□□ -0.25
Pdlim5-201ENSMUST00000029941 Rsrc2A2RTL5 376 aaKnown RBP13.47□□□□□ -0.25
Pdlim5-201ENSMUST00000029941 Ap1m1P35585 423 aa13.47□□□□□ -0.25
Pdlim5-201ENSMUST00000029941 ZyxQ62523 564 aa13.47□□□□□ -0.25
Pdlim5-201ENSMUST00000029941 Tor4aQ8BH02 426 aa13.47□□□□□ -0.25
Pdlim5-201ENSMUST00000029941 Slc39a11Q8BWY7 342 aa13.47□□□□□ -0.25
Pdlim5-201ENSMUST00000029941 Sf3b3Q921M3 1217 aaKnown RBP13.47□□□□□ -0.25
Pdlim5-201ENSMUST00000029941 Klc4Q9DBS5 619 aa13.47□□□□□ -0.25
Pdlim5-201ENSMUST00000029941 Ankrd2Q9WV06 328 aa13.47□□□□□ -0.25
Pdlim5-201ENSMUST00000029941 Igsf9bE9PZ19 1328 aa13.47□□□□□ -0.25
Pdlim5-201ENSMUST00000029941 Robo1O89026 1612 aa13.47□□□□□ -0.25
Pdlim5-201ENSMUST00000029941 Cul4bA2A432 970 aaKnown RBP13.47□□□□□ -0.25
Pdlim5-201ENSMUST00000029941 Cpb1B2RS76 415 aa13.47□□□□□ -0.25
Pdlim5-201ENSMUST00000029941 Gm44503E9PYU5 387 aa13.47□□□□□ -0.25
Pdlim5-201ENSMUST00000029941 Xrcc5P27641 732 aa13.47□□□□□ -0.25
Pdlim5-201ENSMUST00000029941 Znf827Q505G8 1078 aa13.47□□□□□ -0.25
Pdlim5-201ENSMUST00000029941 Strip1Q8C079 837 aa13.47□□□□□ -0.25
Pdlim5-201ENSMUST00000029941 Golga1Q9CW79 758 aa13.47□□□□□ -0.25
Pdlim5-201ENSMUST00000029941 Trip6Q9Z1Y4 480 aa13.47□□□□□ -0.25
Pdlim5-201ENSMUST00000029941 Map2P20357 1828 aa13.47□□□□□ -0.25
Pdlim5-201ENSMUST00000029941 Ftl1P29391 183 aa13.47□□□□□ -0.25
Pdlim5-201ENSMUST00000029941 Man1a2P39098 641 aa13.47□□□□□ -0.25
Pdlim5-201ENSMUST00000029941 Myo1fP70248 1099 aa13.47□□□□□ -0.25
Pdlim5-201ENSMUST00000029941 Neurog2P70447 263 aa13.47□□□□□ -0.25
Pdlim5-201ENSMUST00000029941 Spata5Q3UMC0 893 aaKnown RBP13.47□□□□□ -0.25
Pdlim5-201ENSMUST00000029941 Amhr2Q8K592 568 aa13.47□□□□□ -0.25
Pdlim5-201ENSMUST00000029941 Rpf2Q9JJ80 306 aaKnown RBP13.47□□□□□ -0.25
Pdlim5-201ENSMUST00000029941 Ugt1a8D3Z748 530 aa13.47□□□□□ -0.25
Pdlim5-201ENSMUST00000029941 Ugt1a10E9PXN7 530 aa13.47□□□□□ -0.25
Pdlim5-201ENSMUST00000029941 Chmp6P0C0A3 200 aa13.47□□□□□ -0.25
Pdlim5-201ENSMUST00000029941 Trim21Q62191 470 aa13.47□□□□□ -0.25
Pdlim5-201ENSMUST00000029941 Prkag3Q8BGM7 489 aa13.47□□□□□ -0.25
Pdlim5-201ENSMUST00000029941 Rilpl1Q9JJC6 406 aa13.47□□□□□ -0.25
Pdlim5-201ENSMUST00000029941 Ahnak2E9PYB0 1738 aaKnown RBP13.46□□□□□ -0.25
Pdlim5-201ENSMUST00000029941 Ephb4P54761 987 aa13.46□□□□□ -0.25
Pdlim5-201ENSMUST00000029941 Atp8a1P70704 1164 aa13.46□□□□□ -0.25
Pdlim5-201ENSMUST00000029941 Tmem60Q8K174 133 aa13.46□□□□□ -0.25
Pdlim5-201ENSMUST00000029941 Fermt3Q8K1B8 665 aa13.46□□□□□ -0.25
Pdlim5-201ENSMUST00000029941 BbxQ8VBW5 907 aa13.46□□□□□ -0.25
Pdlim5-201ENSMUST00000029941 Prpf6Q91YR7 941 aaKnown RBP13.46□□□□□ -0.25
Pdlim5-201ENSMUST00000029941 Ndufv1Q91YT0 464 aa13.46□□□□□ -0.25
Pdlim5-201ENSMUST00000029941 CaluO35887 315 aa13.46□□□□□ -0.25
Pdlim5-201ENSMUST00000029941 Lrrc4bP0C192 709 aa13.46□□□□□ -0.25
Retrieved 100 of 22,080 RNA–protein pairs in 26.9 ms