RNA–Protein interactions for RNA: ENSMUST00000027988.7

Ccdc3-201, Transcript of Coiled-coil domain-containing protein 3, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc3, Length 2,670 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc3-201ENSMUST00000027988 Golph3Q9CRA5 298 aa20.32■□□□□ 0.84
Ccdc3-201ENSMUST00000027988 VirmaA2AIV2 1811 aaKnown RBP20.32■□□□□ 0.84
Ccdc3-201ENSMUST00000027988 Map7d1A2AJI0 846 aa20.32■□□□□ 0.84
Ccdc3-201ENSMUST00000027988 Sec24cG3X972 1096 aaKnown RBP20.32■□□□□ 0.84
Ccdc3-201ENSMUST00000027988 Rfpl4bJ3QPR6 266 aa20.32■□□□□ 0.84
Ccdc3-201ENSMUST00000027988 Trap1aP19473 224 aa20.32■□□□□ 0.84
Ccdc3-201ENSMUST00000027988 Kdm7aQ3UWM4 940 aa20.32■□□□□ 0.84
Ccdc3-201ENSMUST00000027988 Pcsk7Q61139 770 aa20.32■□□□□ 0.84
Ccdc3-201ENSMUST00000027988 Rexo1Q7TT28 1213 aa20.32■□□□□ 0.84
Ccdc3-201ENSMUST00000027988 Cct8l1Q80YT3 562 aa20.32■□□□□ 0.84
Ccdc3-201ENSMUST00000027988 F13a1Q8BH61 732 aa20.32■□□□□ 0.84
Ccdc3-201ENSMUST00000027988 Ddx19bQ8BZY3 494 aa20.32■□□□□ 0.84
Ccdc3-201ENSMUST00000027988 Bcas3Q8CCN5 928 aa20.32■□□□□ 0.84
Ccdc3-201ENSMUST00000027988 Ube2sQ921J4 223 aa20.32■□□□□ 0.84
Ccdc3-201ENSMUST00000027988 Ccdc96Q9CR92 584 aa20.32■□□□□ 0.84
Ccdc3-201ENSMUST00000027988 Col11a2Q64739 1736 aa20.32■□□□□ 0.84
Ccdc3-201ENSMUST00000027988 Zfpm1O35615 995 aa20.31■□□□□ 0.84
Ccdc3-201ENSMUST00000027988 Gucy1b3O54865 620 aa20.31■□□□□ 0.84
Ccdc3-201ENSMUST00000027988 Gad1P48318 593 aa20.31■□□□□ 0.84
Ccdc3-201ENSMUST00000027988 Cacnb3P54285 484 aa20.31■□□□□ 0.84
Ccdc3-201ENSMUST00000027988 Sdad1Q80UZ2 687 aaKnown RBP20.31■□□□□ 0.84
Ccdc3-201ENSMUST00000027988 Creb3l3Q91XE9 479 aa20.31■□□□□ 0.84
Ccdc3-201ENSMUST00000027988 Mrvi1Q9WUX5 899 aaKnown RBP20.31■□□□□ 0.84
Ccdc3-201ENSMUST00000027988 UncxO08934 530 aa20.31■□□□□ 0.84
Ccdc3-201ENSMUST00000027988 Ccdc114Q3UX62 658 aa20.31■□□□□ 0.84
Ccdc3-201ENSMUST00000027988 Glg1Q61543 1175 aaKnown RBP20.31■□□□□ 0.84
Ccdc3-201ENSMUST00000027988 Exoc3Q6KAR6 755 aa20.31■□□□□ 0.84
Ccdc3-201ENSMUST00000027988 PigsQ6PD26 555 aaKnown RBP20.31■□□□□ 0.84
Ccdc3-201ENSMUST00000027988 Actn1Q7TPR4 892 aaKnown RBP20.31■□□□□ 0.84
Ccdc3-201ENSMUST00000027988 Josd2Q9CR30 188 aa20.31■□□□□ 0.84
Ccdc3-201ENSMUST00000027988 Armc3A2AU72 881 aa20.3■□□□□ 0.84
Ccdc3-201ENSMUST00000027988 Vcam1P29533 739 aa20.3■□□□□ 0.84
Ccdc3-201ENSMUST00000027988 Psmc6P62334 389 aa20.3■□□□□ 0.84
Ccdc3-201ENSMUST00000027988 Chrna5Q2MKA5 467 aa20.3■□□□□ 0.84
Ccdc3-201ENSMUST00000027988 Sept14Q9DA97 430 aa20.3■□□□□ 0.84
Ccdc3-201ENSMUST00000027988 Mxra8Q9DBV4 442 aa20.3■□□□□ 0.84
Ccdc3-201ENSMUST00000027988 CenphQ9QYM8 241 aa20.3■□□□□ 0.84
Ccdc3-201ENSMUST00000027988 Pitpnm2Q6ZPQ6 1335 aa20.3■□□□□ 0.84
Ccdc3-201ENSMUST00000027988 MtrA6H5Y3 1253 aa20.3■□□□□ 0.84
Ccdc3-201ENSMUST00000027988 Fgd3O88842 733 aa20.3■□□□□ 0.84
Ccdc3-201ENSMUST00000027988 Ighmbp2P40694 993 aa20.3■□□□□ 0.84
Ccdc3-201ENSMUST00000027988 Traf3ip3Q8C0G2 513 aa20.3■□□□□ 0.84
Ccdc3-201ENSMUST00000027988 Fam173bQ9D1Z3 247 aa20.3■□□□□ 0.84
Ccdc3-201ENSMUST00000027988 Arhgap6O54834 987 aa20.3■□□□□ 0.84
Ccdc3-201ENSMUST00000027988 Cyp2e1Q05421 493 aa20.3■□□□□ 0.84
Ccdc3-201ENSMUST00000027988 Sycp1Q62209 993 aa20.3■□□□□ 0.84
Ccdc3-201ENSMUST00000027988 NfrkbQ6PIJ4 1296 aaKnown RBP20.3■□□□□ 0.84
Ccdc3-201ENSMUST00000027988 Armc6Q8BNU0 468 aa20.3■□□□□ 0.84
Ccdc3-201ENSMUST00000027988 Fam193aQ8CGI1 1231 aaKnown RBP20.3■□□□□ 0.84
Ccdc3-201ENSMUST00000027988 Sumf1Q8R0F3 372 aa20.3■□□□□ 0.84
Ccdc3-201ENSMUST00000027988 Mzb1Q9D8I1 188 aa20.3■□□□□ 0.84
Ccdc3-201ENSMUST00000027988 Ankrd35E9Q9D8 996 aa20.29■□□□□ 0.84
Ccdc3-201ENSMUST00000027988 Trim43aQ3TL54 445 aa20.29■□□□□ 0.84
Ccdc3-201ENSMUST00000027988 Ppp1r7Q3UM45 361 aa20.29■□□□□ 0.84
Ccdc3-201ENSMUST00000027988 Klrg2Q3UM83 387 aa20.29■□□□□ 0.84
Ccdc3-201ENSMUST00000027988 Meis1Q60954 390 aa20.29■□□□□ 0.84
Ccdc3-201ENSMUST00000027988 Ubxn1Q922Y1 297 aa20.29■□□□□ 0.84
Ccdc3-201ENSMUST00000027988 Ccdc24E9PUW8 296 aa20.29■□□□□ 0.84
Ccdc3-201ENSMUST00000027988 Vmn2r78K7N6U5 853 aa20.29■□□□□ 0.84
Ccdc3-201ENSMUST00000027988 Il27raO70394 623 aa20.29■□□□□ 0.84
Ccdc3-201ENSMUST00000027988 Atp6v0a2P15920 856 aa20.29■□□□□ 0.84
Ccdc3-201ENSMUST00000027988 Pcif1P59114 706 aa20.29■□□□□ 0.84
Ccdc3-201ENSMUST00000027988 Nsun7Q14AW5 724 aa20.29■□□□□ 0.84
Ccdc3-201ENSMUST00000027988 Ica1lQ3TY65 431 aa20.29■□□□□ 0.84
Ccdc3-201ENSMUST00000027988 Rnf207Q3V3A7 635 aa20.29■□□□□ 0.84
Ccdc3-201ENSMUST00000027988 Gngt1Q61012 74 aa20.29■□□□□ 0.84
Ccdc3-201ENSMUST00000027988 Ttll1Q91V51 423 aa20.29■□□□□ 0.84
Ccdc3-201ENSMUST00000027988 Asic2Q925H0 512 aa20.29■□□□□ 0.84
Ccdc3-201ENSMUST00000027988 Ubr3Q5U430 1889 aa20.28■□□□□ 0.84
Ccdc3-201ENSMUST00000027988 Ap1g2O88512 791 aa20.28■□□□□ 0.84
Ccdc3-201ENSMUST00000027988 Kctd19Q562E2 927 aa20.28■□□□□ 0.84
Ccdc3-201ENSMUST00000027988 Cd37Q61470 281 aa20.28■□□□□ 0.84
Ccdc3-201ENSMUST00000027988 Dhx37Q6NZL1 1150 aa20.28■□□□□ 0.84
Ccdc3-201ENSMUST00000027988 Galnt17Q7TT15 598 aa20.28■□□□□ 0.84
Ccdc3-201ENSMUST00000027988 Tcp10aQ80W76 438 aa20.28■□□□□ 0.84
Ccdc3-201ENSMUST00000027988 Skor1Q8BX46 964 aa20.28■□□□□ 0.84
Ccdc3-201ENSMUST00000027988 Slc13a4Q8BZ82 625 aa20.28■□□□□ 0.84
Ccdc3-201ENSMUST00000027988 Rfc4Q99J62 364 aa20.28■□□□□ 0.84
Ccdc3-201ENSMUST00000027988 Add1Q9QYC0 735 aaKnown RBP20.28■□□□□ 0.84
Ccdc3-201ENSMUST00000027988 Trim30cD3YVI9 513 aa20.28■□□□□ 0.84
Ccdc3-201ENSMUST00000027988 Akr1b10G5E895 316 aa20.28■□□□□ 0.84
Ccdc3-201ENSMUST00000027988 Gm42641I6L9G2 585 aa20.28■□□□□ 0.84
Ccdc3-201ENSMUST00000027988 AtripQ8BMG1 785 aa20.28■□□□□ 0.84
Ccdc3-201ENSMUST00000027988 Kiaa1024Q8K3V7 917 aa20.28■□□□□ 0.84
Ccdc3-201ENSMUST00000027988 Pcdhb5Q91XZ5 792 aa20.28■□□□□ 0.84
Ccdc3-201ENSMUST00000027988 NapaQ9DB05 295 aa20.28■□□□□ 0.84
Ccdc3-201ENSMUST00000027988 Tex21Q9R0U9 575 aa20.28■□□□□ 0.84
Ccdc3-201ENSMUST00000027988 Pls1Q3V0K9 630 aa20.27■□□□□ 0.84
Ccdc3-201ENSMUST00000027988 Tsg101Q61187 391 aa20.27■□□□□ 0.84
Ccdc3-201ENSMUST00000027988 GartQ64737 1010 aa20.27■□□□□ 0.84
Ccdc3-201ENSMUST00000027988 Herc4Q6PAV2 1057 aa20.27■□□□□ 0.84
Ccdc3-201ENSMUST00000027988 Naa35Q6PHQ8 725 aa20.27■□□□□ 0.84
Ccdc3-201ENSMUST00000027988 Cul5Q9D5V5 780 aa20.27■□□□□ 0.84
Ccdc3-201ENSMUST00000027988 Gm28919A0A087WP35 240 aa20.27■□□□□ 0.83
Ccdc3-201ENSMUST00000027988 Zfp408H7BX78 710 aa20.27■□□□□ 0.83
Ccdc3-201ENSMUST00000027988 Hsd17b1P51656 344 aa20.27■□□□□ 0.83
Ccdc3-201ENSMUST00000027988 1810065E05RikQ5NC41 235 aa20.27■□□□□ 0.83
Ccdc3-201ENSMUST00000027988 Klhl20Q8VCK5 604 aa20.27■□□□□ 0.83
Ccdc3-201ENSMUST00000027988 Haus2Q9CQS9 234 aa20.27■□□□□ 0.83
Ccdc3-201ENSMUST00000027988 Klra10Q9R1G6 266 aa20.27■□□□□ 0.83
Retrieved 100 of 22,080 RNA–protein pairs in 21.7 ms