RNA–Protein interactions for RNA: ENSMUST00000020827.6

Rnft1-201, Transcript of E3 ubiquitin-protein ligase RNFT1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Rnft1, Length 4,452 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnft1-201ENSMUST00000020827 Trpc6Q61143 930 aa11.07□□□□□ -0.64
Rnft1-201ENSMUST00000020827 Nr2e1Q64104 385 aa11.07□□□□□ -0.64
Rnft1-201ENSMUST00000020827 Prpf40bQ80W14 870 aa11.07□□□□□ -0.64
Rnft1-201ENSMUST00000020827 PolrmtQ8BKF1 1207 aaKnown RBP11.07□□□□□ -0.64
Rnft1-201ENSMUST00000020827 1700017N19RikA0A087WPJ1 469 aa11.07□□□□□ -0.64
Rnft1-201ENSMUST00000020827 Ccdc24E9PUW8 296 aa11.07□□□□□ -0.64
Rnft1-201ENSMUST00000020827 Gm38392E9Q2A2 434 aa11.07□□□□□ -0.64
Rnft1-201ENSMUST00000020827 Abcd1P48410 736 aa11.07□□□□□ -0.64
Rnft1-201ENSMUST00000020827 Jdp2P97875 163 aa11.07□□□□□ -0.64
Rnft1-201ENSMUST00000020827 Sp4Q62445 782 aa11.07□□□□□ -0.64
Rnft1-201ENSMUST00000020827 Mettl25Q6NXH8 597 aa11.07□□□□□ -0.64
Rnft1-201ENSMUST00000020827 NfrkbQ6PIJ4 1296 aaKnown RBP11.07□□□□□ -0.64
Rnft1-201ENSMUST00000020827 RragaQ80X95 313 aa11.07□□□□□ -0.64
Rnft1-201ENSMUST00000020827 Bpifb6Q8BU51 449 aa11.07□□□□□ -0.64
Rnft1-201ENSMUST00000020827 Bbs7Q8K2G4 715 aa11.07□□□□□ -0.64
Rnft1-201ENSMUST00000020827 Lgi2Q8K4Z0 550 aa11.07□□□□□ -0.64
Rnft1-201ENSMUST00000020827 Ttll1Q91V51 423 aa11.07□□□□□ -0.64
Rnft1-201ENSMUST00000020827 Eif4a3Q91VC3 411 aaKnown RBP11.07□□□□□ -0.64
Rnft1-201ENSMUST00000020827 Q9D5Q8 446 aa11.07□□□□□ -0.64
Rnft1-201ENSMUST00000020827 Calml3Q9D6P8 149 aa11.07□□□□□ -0.64
Rnft1-201ENSMUST00000020827 Dnajc7Q9QYI3 494 aa11.07□□□□□ -0.64
Rnft1-201ENSMUST00000020827 Gm4985A2ALC6 410 aa11.07□□□□□ -0.64
Rnft1-201ENSMUST00000020827 Vmn1r209Q5NC97 312 aa11.07□□□□□ -0.64
Rnft1-201ENSMUST00000020827 Abcf1Q6P542 837 aaKnown RBP11.07□□□□□ -0.64
Rnft1-201ENSMUST00000020827 Ms4a5Q810P8 197 aa11.07□□□□□ -0.64
Rnft1-201ENSMUST00000020827 Phf20l1Q8CCJ9 1013 aa11.07□□□□□ -0.64
Rnft1-201ENSMUST00000020827 Ccdc43Q9CR29 222 aaKnown RBP11.07□□□□□ -0.64
Rnft1-201ENSMUST00000020827 TbcbQ9D1E6 244 aa11.07□□□□□ -0.64
Rnft1-201ENSMUST00000020827 NapaQ9DB05 295 aa11.07□□□□□ -0.64
Rnft1-201ENSMUST00000020827 Rgs17Q9QZB0 210 aa11.07□□□□□ -0.64
Rnft1-201ENSMUST00000020827 Nmt1O70310 496 aaKnown RBP11.06□□□□□ -0.64
Rnft1-201ENSMUST00000020827 Dact1Q8R4A3 778 aa11.06□□□□□ -0.64
Rnft1-201ENSMUST00000020827 Mxra8Q9DBV4 442 aa11.06□□□□□ -0.64
Rnft1-201ENSMUST00000020827 Hsd3b7Q9EQC1 369 aa11.06□□□□□ -0.64
Rnft1-201ENSMUST00000020827 Atp1a4Q9WV27 1032 aa11.06□□□□□ -0.64
Rnft1-201ENSMUST00000020827 Cpb1B2RS76 415 aa11.06□□□□□ -0.64
Rnft1-201ENSMUST00000020827 Cc2d1bQ8BRN9 848 aa11.06□□□□□ -0.64
Rnft1-201ENSMUST00000020827 Spata4Q8K3V1 295 aa11.06□□□□□ -0.64
Rnft1-201ENSMUST00000020827 Gpsm2Q8VDU0 679 aa11.06□□□□□ -0.64
Rnft1-201ENSMUST00000020827 Eid1Q9DCR4 169 aa11.06□□□□□ -0.64
Rnft1-201ENSMUST00000020827 Ankrd2Q9WV06 328 aa11.06□□□□□ -0.64
Rnft1-201ENSMUST00000020827 DgkiD3YWQ0 1071 aa11.06□□□□□ -0.64
Rnft1-201ENSMUST00000020827 Jakmip2D3YXK0 820 aa11.06□□□□□ -0.64
Rnft1-201ENSMUST00000020827 Magea1O89006 320 aa11.06□□□□□ -0.64
Rnft1-201ENSMUST00000020827 Magea5O89009 320 aa11.06□□□□□ -0.64
Rnft1-201ENSMUST00000020827 ArP19091 899 aa11.06□□□□□ -0.64
Rnft1-201ENSMUST00000020827 YdjcQ14BV6 310 aa11.06□□□□□ -0.64
Rnft1-201ENSMUST00000020827 Znf354cQ571J5 560 aa11.06□□□□□ -0.64
Rnft1-201ENSMUST00000020827 Rhpn1Q61085 643 aa11.06□□□□□ -0.64
Rnft1-201ENSMUST00000020827 Spag7Q7TNE3 227 aaKnown RBP11.06□□□□□ -0.64
Rnft1-201ENSMUST00000020827 Tmc4Q7TQ65 694 aa11.06□□□□□ -0.64
Rnft1-201ENSMUST00000020827 Znf618Q80YY7 953 aaKnown RBP11.06□□□□□ -0.64
Rnft1-201ENSMUST00000020827 Chtf18Q8BIW9 969 aa11.06□□□□□ -0.64
Rnft1-201ENSMUST00000020827 Ccdc122Q8BVN0 290 aa11.06□□□□□ -0.64
Rnft1-201ENSMUST00000020827 Unc5bQ8K1S3 945 aa11.06□□□□□ -0.64
Rnft1-201ENSMUST00000020827 Borcs6Q9D6W8 360 aa11.06□□□□□ -0.64
Rnft1-201ENSMUST00000020827 Mzb1Q9D8I1 188 aa11.06□□□□□ -0.64
Rnft1-201ENSMUST00000020827 Magea2Q9R2A2 320 aa11.06□□□□□ -0.64
Rnft1-201ENSMUST00000020827 Pcdh11xF6ZNL5 1338 aa11.06□□□□□ -0.64
Rnft1-201ENSMUST00000020827 Krt36B1AQ75 473 aa11.05□□□□□ -0.64
Rnft1-201ENSMUST00000020827 Zfp781Q0P5U5 243 aa11.05□□□□□ -0.64
Rnft1-201ENSMUST00000020827 Trappc10Q3TLI0 1259 aa11.05□□□□□ -0.64
Rnft1-201ENSMUST00000020827 FntaQ61239 377 aa11.05□□□□□ -0.64
Rnft1-201ENSMUST00000020827 Tfe3Q64092 572 aaKnown RBP11.05□□□□□ -0.64
Rnft1-201ENSMUST00000020827 Ctnna3Q65CL1 895 aa11.05□□□□□ -0.64
Rnft1-201ENSMUST00000020827 Krt42Q6IFX2 452 aa11.05□□□□□ -0.64
Rnft1-201ENSMUST00000020827 Kdm1aQ6ZQ88 853 aa11.05□□□□□ -0.64
Rnft1-201ENSMUST00000020827 R3hdm2Q80TM6 1044 aaKnown RBP11.05□□□□□ -0.64
Rnft1-201ENSMUST00000020827 Kif2bQ8C0N1 668 aa11.05□□□□□ -0.64
Rnft1-201ENSMUST00000020827 Fermt2Q8CIB5 680 aa11.05□□□□□ -0.64
Rnft1-201ENSMUST00000020827 Ago4Q8CJF8 861 aa11.05□□□□□ -0.64
Rnft1-201ENSMUST00000020827 Coa7Q921H9 231 aa11.05□□□□□ -0.64
Rnft1-201ENSMUST00000020827 Lmbr1Q9JIT0 490 aa11.05□□□□□ -0.64
Rnft1-201ENSMUST00000020827 Vav3Q9R0C8 847 aa11.05□□□□□ -0.64
Rnft1-201ENSMUST00000020827 IkQ9Z1M8 557 aaKnown RBP11.05□□□□□ -0.64
Rnft1-201ENSMUST00000020827 Cnbd1B1AWM0 430 aa11.05□□□□□ -0.64
Rnft1-201ENSMUST00000020827 Abcb4P21440 1276 aa11.05□□□□□ -0.64
Rnft1-201ENSMUST00000020827 Dlg4Q62108 724 aa11.05□□□□□ -0.64
Rnft1-201ENSMUST00000020827 Hgh1Q8C3I8 393 aa11.05□□□□□ -0.64
Rnft1-201ENSMUST00000020827 Enox2Q8R0Z2 598 aa11.05□□□□□ -0.64
Rnft1-201ENSMUST00000020827 Ndst4Q9EQW8 872 aa11.05□□□□□ -0.64
Rnft1-201ENSMUST00000020827 Tfr2Q9JKX3 798 aa11.05□□□□□ -0.64
Rnft1-201ENSMUST00000020827 Frmpd3A0A140LIW3 1774 aa11.05□□□□□ -0.64
Rnft1-201ENSMUST00000020827 Xirp1O70373 1129 aa11.05□□□□□ -0.64
Rnft1-201ENSMUST00000020827 Epb41l4aP52963 686 aa11.05□□□□□ -0.64
Rnft1-201ENSMUST00000020827 Tff2Q03404 129 aa11.05□□□□□ -0.64
Rnft1-201ENSMUST00000020827 Depdc1aQ8CIG0 804 aa11.05□□□□□ -0.64
Rnft1-201ENSMUST00000020827 Nxnl2Q9D531 156 aa11.05□□□□□ -0.64
Rnft1-201ENSMUST00000020827 Frmpd4A2AFR3 1320 aa11.05□□□□□ -0.64
Rnft1-201ENSMUST00000020827 Sec24cG3X972 1096 aaKnown RBP11.05□□□□□ -0.64
Rnft1-201ENSMUST00000020827 Trim29Q8R2Q0 587 aa11.05□□□□□ -0.64
Rnft1-201ENSMUST00000020827 Lrrc57Q9D1G5 239 aa11.05□□□□□ -0.64
Rnft1-201ENSMUST00000020827 Vmn2r71L7N2D8 855 aa11.04□□□□□ -0.64
Rnft1-201ENSMUST00000020827 Mdh1P14152 334 aa11.04□□□□□ -0.64
Rnft1-201ENSMUST00000020827 Ighmbp2P40694 993 aa11.04□□□□□ -0.64
Rnft1-201ENSMUST00000020827 Krt87Q6IMF0 495 aa11.04□□□□□ -0.64
Rnft1-201ENSMUST00000020827 Asic3Q6X1Y6 530 aa11.04□□□□□ -0.64
Rnft1-201ENSMUST00000020827 B4galnt4Q766D5 1034 aa11.04□□□□□ -0.64
Rnft1-201ENSMUST00000020827 Tlr2Q9QUN7 784 aa11.04□□□□□ -0.64
Rnft1-201ENSMUST00000020827 Uchl5Q9WUP7 329 aa11.04□□□□□ -0.64
Retrieved 100 of 22,080 RNA–protein pairs in 12.1 ms