RNA–Protein interactions for RNA: ENSMUST00000009885.13

Ubp1-201, Transcript of Upstream-binding protein 1, mousemouse

APPRIS ALT1 TSL 5 BASIC

Gene Ubp1, Length 3,742 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubp1-201ENSMUST00000009885 Bicd1Q8BR07 835 aa20.44■□□□□ 0.86
Ubp1-201ENSMUST00000009885 Lman1Q9D0F3 517 aa20.44■□□□□ 0.86
Ubp1-201ENSMUST00000009885 UvssaQ9D479 717 aa20.44■□□□□ 0.86
Ubp1-201ENSMUST00000009885 Stat4P42228 749 aa20.43■□□□□ 0.86
Ubp1-201ENSMUST00000009885 Lilrb4Q64281 335 aa20.43■□□□□ 0.86
Ubp1-201ENSMUST00000009885 Ttll4Q80UG8 1193 aa20.43■□□□□ 0.86
Ubp1-201ENSMUST00000009885 Csgalnact2Q8C1F4 542 aa20.43■□□□□ 0.86
Ubp1-201ENSMUST00000009885 Xrcc4Q924T3 326 aa20.43■□□□□ 0.86
Ubp1-201ENSMUST00000009885 Riok3Q9DBU3 519 aaKnown RBP20.43■□□□□ 0.86
Ubp1-201ENSMUST00000009885 Fmnl1Q9JL26 1094 aa20.43■□□□□ 0.86
Ubp1-201ENSMUST00000009885 Rabgef1Q9JM13 491 aa20.43■□□□□ 0.86
Ubp1-201ENSMUST00000009885 Lmnb2P21619 596 aaKnown RBP20.43■□□□□ 0.86
Ubp1-201ENSMUST00000009885 Serpina1bP22599 413 aa20.43■□□□□ 0.86
Ubp1-201ENSMUST00000009885 Kcna6Q61923 529 aa20.43■□□□□ 0.86
Ubp1-201ENSMUST00000009885 Calml4Q91WQ9 153 aa20.43■□□□□ 0.86
Ubp1-201ENSMUST00000009885 MetP16056 1379 aa20.43■□□□□ 0.86
Ubp1-201ENSMUST00000009885 Gm7356A0A087WSA6 508 aa20.43■□□□□ 0.86
Ubp1-201ENSMUST00000009885 GabrdP22933 449 aa20.43■□□□□ 0.86
Ubp1-201ENSMUST00000009885 Pkn1P70268 946 aa20.43■□□□□ 0.86
Ubp1-201ENSMUST00000009885 TraddQ3U0V2 310 aa20.43■□□□□ 0.86
Ubp1-201ENSMUST00000009885 Oxr1Q4KMM3 866 aa20.43■□□□□ 0.86
Ubp1-201ENSMUST00000009885 Esco1Q69Z69 843 aa20.43■□□□□ 0.86
Ubp1-201ENSMUST00000009885 Camsap3Q80VC9 1252 aa20.43■□□□□ 0.86
Ubp1-201ENSMUST00000009885 Llgl1Q80Y17 1036 aa20.43■□□□□ 0.86
Ubp1-201ENSMUST00000009885 ClasrpQ8CFC7 668 aa20.43■□□□□ 0.86
Ubp1-201ENSMUST00000009885 Ubxn6Q99PL6 442 aa20.43■□□□□ 0.86
Ubp1-201ENSMUST00000009885 Adgrf5G5E8Q8 1348 aa20.42■□□□□ 0.86
Ubp1-201ENSMUST00000009885 Cracr2aQ3UP38 310 aa20.42■□□□□ 0.86
Ubp1-201ENSMUST00000009885 Znf496Q5SXI5 585 aa20.42■□□□□ 0.86
Ubp1-201ENSMUST00000009885 Mettl25Q6NXH8 597 aa20.42■□□□□ 0.86
Ubp1-201ENSMUST00000009885 Lmbrd1Q8K0B2 537 aa20.42■□□□□ 0.86
Ubp1-201ENSMUST00000009885 Nxnl2Q9D531 156 aa20.42■□□□□ 0.86
Ubp1-201ENSMUST00000009885 Gucy1a3Q9ERL9 691 aa20.42■□□□□ 0.86
Ubp1-201ENSMUST00000009885 Foxo6Q70KY4 559 aa20.42■□□□□ 0.86
Ubp1-201ENSMUST00000009885 Susd4Q8BH32 490 aa20.42■□□□□ 0.86
Ubp1-201ENSMUST00000009885 Cep83Q9D5R3 692 aa20.42■□□□□ 0.86
Ubp1-201ENSMUST00000009885 Cd2apQ9JLQ0 637 aa20.42■□□□□ 0.86
Ubp1-201ENSMUST00000009885 Gm28036V9GXJ1 658 aa20.42■□□□□ 0.86
Ubp1-201ENSMUST00000009885 Eif6O55135 245 aa20.42■□□□□ 0.86
Ubp1-201ENSMUST00000009885 Sparcl1P70663 650 aa20.42■□□□□ 0.86
Ubp1-201ENSMUST00000009885 Pls1Q3V0K9 630 aa20.42■□□□□ 0.86
Ubp1-201ENSMUST00000009885 RadxQ8C779 850 aa20.42■□□□□ 0.86
Ubp1-201ENSMUST00000009885 Commd10Q8JZY2 202 aa20.42■□□□□ 0.86
Ubp1-201ENSMUST00000009885 Shtn1Q8K2Q9 631 aa20.42■□□□□ 0.86
Ubp1-201ENSMUST00000009885 Znf609Q8BZ47 1413 aa20.41■□□□□ 0.86
Ubp1-201ENSMUST00000009885 Apba1B2RUJ5 842 aa20.41■□□□□ 0.86
Ubp1-201ENSMUST00000009885 Tex13cD3YU32 604 aa20.41■□□□□ 0.86
Ubp1-201ENSMUST00000009885 Guca2bO09051 106 aa20.41■□□□□ 0.86
Ubp1-201ENSMUST00000009885 Gna11P21278 359 aa20.41■□□□□ 0.86
Ubp1-201ENSMUST00000009885 Sem1P60897 70 aa20.41■□□□□ 0.86
Ubp1-201ENSMUST00000009885 Spout1Q3UHX9 385 aaKnown RBP20.41■□□□□ 0.86
Ubp1-201ENSMUST00000009885 Gm5169Q5M8P2 212 aa20.41■□□□□ 0.86
Ubp1-201ENSMUST00000009885 P3h4Q8K2B0 443 aa20.41■□□□□ 0.86
Ubp1-201ENSMUST00000009885 Ddx54Q8K4L0 874 aaKnown RBP20.41■□□□□ 0.86
Ubp1-201ENSMUST00000009885 Ppp2r5dQ91V89 594 aa20.41■□□□□ 0.86
Ubp1-201ENSMUST00000009885 Znf638Q61464 1960 aaKnown RBP20.41■□□□□ 0.86
Ubp1-201ENSMUST00000009885 Copb2O55029 905 aa20.41■□□□□ 0.86
Ubp1-201ENSMUST00000009885 StilQ60988 1262 aa20.41■□□□□ 0.86
Ubp1-201ENSMUST00000009885 Serpinb6eI7HJI3 429 aa20.41■□□□□ 0.86
Ubp1-201ENSMUST00000009885 Nrg3O35181 713 aa20.41■□□□□ 0.86
Ubp1-201ENSMUST00000009885 Zc3h12cQ5DTV4 884 aa20.41■□□□□ 0.86
Ubp1-201ENSMUST00000009885 Xlr3bQ6P205 226 aa20.41■□□□□ 0.86
Ubp1-201ENSMUST00000009885 Fmnl3Q6ZPF4 1028 aa20.41■□□□□ 0.86
Ubp1-201ENSMUST00000009885 Brd2Q7JJ13 798 aaKnown RBP20.41■□□□□ 0.86
Ubp1-201ENSMUST00000009885 Tbc1d23Q8K0F1 684 aa20.41■□□□□ 0.86
Ubp1-201ENSMUST00000009885 Ranbp17Q99NF8 1088 aa20.41■□□□□ 0.86
Ubp1-201ENSMUST00000009885 GsdmeQ9Z2D3 512 aa20.41■□□□□ 0.86
Ubp1-201ENSMUST00000009885 Tns3Q5SSZ5 1440 aa20.41■□□□□ 0.86
Ubp1-201ENSMUST00000009885 1700016G14RikA0A286YCZ6 238 aa20.4■□□□□ 0.86
Ubp1-201ENSMUST00000009885 Gm1758F6VZZ1 202 aa20.4■□□□□ 0.86
Ubp1-201ENSMUST00000009885 ProcP33587 460 aa20.4■□□□□ 0.86
Ubp1-201ENSMUST00000009885 Akr1b1P45376 316 aa20.4■□□□□ 0.86
Ubp1-201ENSMUST00000009885 Fam183bQ5NC57 135 aa20.4■□□□□ 0.86
Ubp1-201ENSMUST00000009885 Usp38Q8BW70 1042 aa20.4■□□□□ 0.86
Ubp1-201ENSMUST00000009885 Lrrc55Q3UY51 311 aa20.4■□□□□ 0.86
Ubp1-201ENSMUST00000009885 Myo19Q5SV80 963 aa20.4■□□□□ 0.86
Ubp1-201ENSMUST00000009885 Acbd3Q8BMP6 525 aa20.4■□□□□ 0.86
Ubp1-201ENSMUST00000009885 Dnm1lQ8K1M6 742 aa20.4■□□□□ 0.86
Ubp1-201ENSMUST00000009885 Atp6v1e2Q9D593 226 aa20.4■□□□□ 0.86
Ubp1-201ENSMUST00000009885 CoasyQ9DBL7 563 aa20.4■□□□□ 0.86
Ubp1-201ENSMUST00000009885 Tfap4Q9JIZ5 338 aa20.4■□□□□ 0.86
Ubp1-201ENSMUST00000009885 RelaQ04207 549 aa20.4■□□□□ 0.86
Ubp1-201ENSMUST00000009885 Asap3Q5U464 904 aa20.4■□□□□ 0.86
Ubp1-201ENSMUST00000009885 Erp44Q9D1Q6 406 aa20.4■□□□□ 0.86
Ubp1-201ENSMUST00000009885 Ccnt1Q9QWV9 724 aaKnown RBP20.4■□□□□ 0.86
Ubp1-201ENSMUST00000009885 Trim10Q9WUH5 489 aa20.4■□□□□ 0.86
Ubp1-201ENSMUST00000009885 Hdac6Q9Z2V5 1149 aa20.4■□□□□ 0.86
Ubp1-201ENSMUST00000009885 Pcdh11xF6ZNL5 1338 aa20.39■□□□□ 0.86
Ubp1-201ENSMUST00000009885 Nme9A0A1L1SUL6 329 aa20.39■□□□□ 0.86
Ubp1-201ENSMUST00000009885 Lrrc32G3XA59 663 aa20.39■□□□□ 0.86
Ubp1-201ENSMUST00000009885 PtgdrP70263 357 aa20.39■□□□□ 0.86
Ubp1-201ENSMUST00000009885 Gspt2Q149F3 632 aa20.39■□□□□ 0.86
Ubp1-201ENSMUST00000009885 MlxipQ2VPU4 917 aa20.39■□□□□ 0.86
Ubp1-201ENSMUST00000009885 Krt15Q61414 452 aa20.39■□□□□ 0.86
Ubp1-201ENSMUST00000009885 Actn1Q7TPR4 892 aaKnown RBP20.39■□□□□ 0.86
Ubp1-201ENSMUST00000009885 Ccdc28aQ8CEI3 192 aa20.39■□□□□ 0.86
Ubp1-201ENSMUST00000009885 Foxo4Q9WVH3 505 aa20.39■□□□□ 0.86
Ubp1-201ENSMUST00000009885 Btbd18A0A0A6YY25 723 aa20.39■□□□□ 0.85
Ubp1-201ENSMUST00000009885 D1Pas1P16381 660 aa20.39■□□□□ 0.85
Ubp1-201ENSMUST00000009885 Mybl1P51960 751 aa20.39■□□□□ 0.85
Retrieved 100 of 22,080 RNA–protein pairs in 15.1 ms