RNA–Protein interactions for RNA: snR52

snR52, Transcript of C/D box small nucleolar RNA (snoRNA), yeast

Gene snR52, Length 92 nt, Biotype snoRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
snR52	snR52	CPR7	P47103	393 aa		0.67	□□□□□ -2.3
snR52	snR52	FOL1	P53848	824 aa		0.67	□□□□□ -2.3
snR52	snR52	YMR181C	Q03231	154 aa		0.67	□□□□□ -2.3
snR52	snR52	PPM1	Q04081	328 aa		0.67	□□□□□ -2.3
snR52	snR52	CTI6	Q08923	506 aa		0.67	□□□□□ -2.3
snR52	snR52	IZH2	Q12442	317 aa		0.67	□□□□□ -2.3
snR52	snR52	MES1	P00958	751 aa	Known RBP	0.66	□□□□□ -2.3
snR52	snR52	GAL1	P04385	528 aa		0.66	□□□□□ -2.3
snR52	snR52	MRP13	P12686	339 aa		0.66	□□□□□ -2.3
snR52	snR52	SSE2	P32590	693 aa	Known RBP	0.66	□□□□□ -2.3
snR52	snR52	AGA2	P32781	87 aa		0.66	□□□□□ -2.3
snR52	snR52	LYS4	P49367	693 aa	Predicted RBP	0.66	□□□□□ -2.3
snR52	snR52	YPS5	P53057	165 aa		0.66	□□□□□ -2.3
snR52	snR52	CAF130	P53280	1122 aa	Predicted RBP	0.66	□□□□□ -2.3
snR52	snR52	DOS2	P54858	310 aa		0.66	□□□□□ -2.3
snR52	snR52	PNG1	Q02890	363 aa		0.66	□□□□□ -2.3
snR52	snR52	COQ9	Q05779	260 aa		0.66	□□□□□ -2.3
snR52	snR52	YPR195C	Q06594	109 aa		0.66	□□□□□ -2.3
snR52	snR52	YLR302C	O13544	120 aa		0.65	□□□□□ -2.31
snR52	snR52	YAR066W	P0CX18	203 aa		0.65	□□□□□ -2.31
snR52	snR52	YHR214W	P0CX19	203 aa		0.65	□□□□□ -2.31
snR52	snR52	TIP1	P27654	210 aa	Predicted RBP	0.65	□□□□□ -2.31
snR52	snR52	ITR1	P30605	584 aa		0.65	□□□□□ -2.31
snR52	snR52	YBR144C	P34215	104 aa		0.65	□□□□□ -2.31
snR52	snR52	RTC2	P38279	296 aa		0.65	□□□□□ -2.31
snR52	snR52	ISC1	P40015	477 aa	Known RBP	0.65	□□□□□ -2.31
snR52	snR52	MRPL13	Q02204	264 aa		0.65	□□□□□ -2.31
snR52	snR52	NDE2	Q07500	545 aa		0.65	□□□□□ -2.31
snR52	snR52	MF(ALPHA)1	P01149	165 aa		0.64	□□□□□ -2.31
snR52	snR52	NUC1	P08466	329 aa		0.64	□□□□□ -2.31
snR52	snR52	PRP2	P20095	876 aa	Predicted RBP	0.64	□□□□□ -2.31
snR52	snR52	AAT2	P23542	418 aa	Known RBP	0.64	□□□□□ -2.31
snR52	snR52	REC114	P32841	428 aa		0.64	□□□□□ -2.31
snR52	snR52	GRX7	P38068	203 aa		0.64	□□□□□ -2.31
snR52	snR52	YHL041W	P38730	149 aa		0.64	□□□□□ -2.31
snR52	snR52	URB2	P47108	1174 aa		0.64	□□□□□ -2.31
snR52	snR52	ZPR1	P53303	486 aa	Known RBP	0.64	□□□□□ -2.31
snR52	snR52	TPS1	Q00764	495 aa	Known RBP	0.64	□□□□□ -2.31
snR52	snR52	TOF2	Q02208	771 aa		0.64	□□□□□ -2.31
snR52	snR52	MFB1	Q04922	465 aa		0.64	□□□□□ -2.31
snR52	snR52	BEM2	P39960	2167 aa	Known RBP	0.63	□□□□□ -2.31
snR52	snR52	ARD1	P07347	238 aa	Predicted RBP	0.63	□□□□□ -2.31
snR52	snR52	MSM1	P22438	575 aa		0.63	□□□□□ -2.31
snR52	snR52	PTP2	P29461	750 aa		0.63	□□□□□ -2.31
snR52	snR52	HIR2	P32480	875 aa		0.63	□□□□□ -2.31
snR52	snR52	TEF4	P36008	412 aa	Known RBP	0.63	□□□□□ -2.31
snR52	snR52	MRPL27	P36526	146 aa	Predicted RBP	0.63	□□□□□ -2.31
snR52	snR52	OM14	P38325	134 aa		0.63	□□□□□ -2.31
snR52	snR52	YGP1	P38616	354 aa	Known RBP	0.63	□□□□□ -2.31
snR52	snR52	BAT1	P38891	393 aa	Known RBP	0.63	□□□□□ -2.31
snR52	snR52	YMR147W	P40218	223 aa	Known RBP	0.63	□□□□□ -2.31
snR52	snR52	SYG1	P40528	902 aa		0.63	□□□□□ -2.31
snR52	snR52	LAM5	P43560	674 aa		0.63	□□□□□ -2.31
snR52	snR52	TAN1	P53072	289 aa	Predicted RBP	0.63	□□□□□ -2.31
snR52	snR52	SLG1	P54867	378 aa		0.63	□□□□□ -2.31
snR52	snR52	LUC7	Q07508	261 aa	Predicted RBP	0.63	□□□□□ -2.31
snR52	snR52	JID1	Q12350	301 aa		0.63	□□□□□ -2.31
snR52	snR52	HSC82	P15108	705 aa	Known RBP	0.62	□□□□□ -2.31
snR52	snR52	EST1	P17214	699 aa	Predicted RBP	0.62	□□□□□ -2.31
snR52	snR52	ECM25	P32525	599 aa		0.62	□□□□□ -2.31
snR52	snR52	IES6	P32617	166 aa		0.62	□□□□□ -2.31
snR52	snR52	XRS2	P33301	854 aa		0.62	□□□□□ -2.31
snR52	snR52	YPT35	P38815	214 aa	Known RBP	0.62	□□□□□ -2.31
snR52	snR52	KEL1	P38853	1164 aa	Known RBP	0.62	□□□□□ -2.31
snR52	snR52	BNA1	P47096	177 aa		0.62	□□□□□ -2.31
snR52	snR52	UPF3	P48412	387 aa	Known RBP	0.62	□□□□□ -2.31
snR52	snR52	MUM3	Q08750	479 aa		0.62	□□□□□ -2.31
snR52	snR52	PKH2	Q12236	1081 aa	Known RBP	0.62	□□□□□ -2.31
snR52	snR52	BRR1	Q99177	341 aa	Predicted RBP	0.62	□□□□□ -2.31
snR52	snR52	LEU4	P06208	619 aa	Known RBP	0.61	□□□□□ -2.31
snR52	snR52	ZUO1	P32527	433 aa	Known RBP	0.61	□□□□□ -2.31
snR52	snR52	MUD1	P32605	298 aa	Known RBP	0.61	□□□□□ -2.31
snR52	snR52	RML2	P32611	393 aa		0.61	□□□□□ -2.31
snR52	snR52	YCR041W	P37265	110 aa		0.61	□□□□□ -2.31
snR52	snR52	MUM2	P38236	366 aa		0.61	□□□□□ -2.31
snR52	snR52	PFF1	P38244	976 aa		0.61	□□□□□ -2.31
snR52	snR52	ACA1	P39970	489 aa		0.61	□□□□□ -2.31
snR52	snR52	YFL012W	P43580	148 aa		0.61	□□□□□ -2.31
snR52	snR52	MDE1	P47095	244 aa		0.61	□□□□□ -2.31
snR52	snR52	YIP5	P53108	310 aa		0.61	□□□□□ -2.31
snR52	snR52	YPL107W	Q02873	248 aa		0.61	□□□□□ -2.31
snR52	snR52	YLL032C	Q07834	825 aa	Known RBP RIP-Chip data	0.61	□□□□□ -2.31	not detected
snR52	snR52	TIM18	Q08749	192 aa		0.61	□□□□□ -2.31
snR52	snR52	SNX3	Q08826	162 aa	Known RBP	0.61	□□□□□ -2.31
snR52	snR52	TRM8	Q12009	286 aa		0.61	□□□□□ -2.31
snR52	snR52	YDR061W	Q12298	539 aa		0.61	□□□□□ -2.31
snR52	snR52	RTP1	Q12751	981 aa		0.61	□□□□□ -2.31
snR52	snR52	YOL087C	Q99247	1116 aa		0.61	□□□□□ -2.31
snR52	snR52	CNS1	P33313	385 aa		0.6	□□□□□ -2.31
snR52	snR52	CHL4	P38907	458 aa		0.6	□□□□□ -2.31
snR52	snR52	FRT2	P39734	528 aa		0.6	□□□□□ -2.31
snR52	snR52	PEX8	P53248	589 aa		0.6	□□□□□ -2.31
snR52	snR52	YMR102C	Q03177	834 aa		0.6	□□□□□ -2.31
snR52	snR52	SOV1	Q04748	898 aa		0.6	□□□□□ -2.31
snR52	snR52	TPI1	P00942	248 aa	Known RBP	0.59	□□□□□ -2.31
snR52	snR52	KAR3	P17119	729 aa		0.59	□□□□□ -2.31
snR52	snR52	PHO81	P17442	1178 aa		0.59	□□□□□ -2.31
snR52	snR52	RPB5	P20434	215 aa		0.59	□□□□□ -2.31
snR52	snR52	PRR1	P28708	518 aa		0.59	□□□□□ -2.31
snR52	snR52	APE2	P32454	952 aa	Known RBP	0.59	□□□□□ -2.31

Retrieved 100 of 5,963 RNA–protein pairs in 14.7 ms