RNA–Protein interactions for RNA: snR38

snR38, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR38, Length 95 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR38snR38 IMA5P40884 581 aa-0.61□□□□□ -2.51
snR38snR38 BUD6P41697 788 aa-0.61□□□□□ -2.51
snR38snR38 ERR3P42222 437 aa-0.61□□□□□ -2.51
snR38snR38 RPL21AQ02753 160 aaKnown RBP-0.61□□□□□ -2.51
snR38snR38 VTI1Q04338 217 aa-0.61□□□□□ -2.51
snR38snR38 INM2Q05533 292 aa-0.61□□□□□ -2.51
snR38snR38 RBS1Q05672 457 aaKnown RBP-0.61□□□□□ -2.51
snR38snR38 NUR1Q12066 484 aa-0.61□□□□□ -2.51
snR38snR38 LEU9Q12166 604 aaKnown RBP-0.61□□□□□ -2.51
snR38snR38 RPL21BQ12672 160 aaKnown RBP-0.61□□□□□ -2.51
snR38snR38 TOP1P04786 769 aa-0.62□□□□□ -2.51
snR38snR38 GLK1P17709 500 aaKnown RBP-0.62□□□□□ -2.51
snR38snR38 RIT1P23796 513 aa-0.62□□□□□ -2.51
snR38snR38 SWI4P25302 1093 aaKnown RBP-0.62□□□□□ -2.51
snR38snR38 MIG1P27705 504 aa-0.62□□□□□ -2.51
snR38snR38 HIR2P32480 875 aa-0.62□□□□□ -2.51
snR38snR38 ECM25P32525 599 aa-0.62□□□□□ -2.51
snR38snR38 MTR2P34232 184 aaKnown RBP-0.62□□□□□ -2.51
snR38snR38 GEX2P36173 615 aa-0.62□□□□□ -2.51
snR38snR38 FSH1P38777 243 aaKnown RBP-0.62□□□□□ -2.51
snR38snR38 BAT1P38891 393 aaKnown RBP-0.62□□□□□ -2.51
snR38snR38 ASP1P38986 381 aaPredicted RBP-0.62□□□□□ -2.51
snR38snR38 POP2P39008 433 aa-0.62□□□□□ -2.51
snR38snR38 IGD1P43598 195 aa-0.62□□□□□ -2.51
snR38snR38 INP2Q03824 705 aa-0.62□□□□□ -2.51
snR38snR38 MRX8Q05473 314 aa-0.62□□□□□ -2.51
snR38snR38 LDS2Q08218 356 aa-0.62□□□□□ -2.51
snR38snR38 YPR022CQ12139 1133 aa-0.62□□□□□ -2.51
snR38snR38 ERG27Q12452 347 aaKnown RBP-0.62□□□□□ -2.51
snR38snR38 CYC3P06182 269 aa-0.63□□□□□ -2.51
snR38snR38 ZRC1P20107 442 aa-0.63□□□□□ -2.51
snR38snR38 YEL043WP32618 956 aa-0.63□□□□□ -2.51
snR38snR38 MRE11P32829 692 aa-0.63□□□□□ -2.51
snR38snR38 GPP1P41277 250 aaKnown RBP-0.63□□□□□ -2.51
snR38snR38 PTR3P43606 678 aa-0.63□□□□□ -2.51
snR38snR38 IMA1P53051 589 aa-0.63□□□□□ -2.51
snR38snR38 DSD1P53095 428 aa-0.63□□□□□ -2.51
snR38snR38 YGR126WP53274 230 aa-0.63□□□□□ -2.51
snR38snR38 RIF2Q06208 395 aa-0.63□□□□□ -2.51
snR38snR38 TEN1Q07921 160 aa-0.63□□□□□ -2.51
snR38snR38 SNX3Q08826 162 aaKnown RBP-0.63□□□□□ -2.51
snR38snR38 SMF3Q12078 473 aaPredicted RBP-0.63□□□□□ -2.51
snR38snR38 NOP14Q99207 810 aaKnown RBP-0.63□□□□□ -2.51
snR38snR38 RAD52P06778 471 aaKnown RBP-0.64□□□□□ -2.51
snR38snR38 POL4P25615 582 aa-0.64□□□□□ -2.51
snR38snR38 BUB3P26449 341 aa-0.64□□□□□ -2.51
snR38snR38 DEP1P31385 405 aa-0.64□□□□□ -2.51
snR38snR38 REG2P38232 338 aa-0.64□□□□□ -2.51
snR38snR38 ECM34P38728 170 aa-0.64□□□□□ -2.51
snR38snR38 NPR3P38742 1146 aa-0.64□□□□□ -2.51
snR38snR38 STT3P39007 718 aaKnown RBP-0.64□□□□□ -2.51
snR38snR38 PEX22P39718 180 aa-0.64□□□□□ -2.51
snR38snR38 ISC1P40015 477 aaKnown RBP-0.64□□□□□ -2.51
snR38snR38 FAF1P40546 346 aaPredicted RBP-0.64□□□□□ -2.51
snR38snR38 OSW7P43611 510 aa-0.64□□□□□ -2.51
snR38snR38 YGR127WP53275 312 aa-0.64□□□□□ -2.51
snR38snR38 ARE2P53629 642 aaKnown RBP-0.64□□□□□ -2.51
snR38snR38 ALG12P53730 551 aa-0.64□□□□□ -2.51
snR38snR38 IWR1Q07532 353 aaPredicted RBP-0.64□□□□□ -2.51
snR38snR38 RLP24Q07915 199 aaKnown RBP-0.64□□□□□ -2.51
snR38snR38 YOR365CQ08844 703 aa-0.64□□□□□ -2.51
snR38snR38 SLX4Q12098 748 aa-0.64□□□□□ -2.51
snR38snR38 TIR4Q12218 487 aaPredicted RBP-0.64□□□□□ -2.51
snR38snR38 PKH2Q12236 1081 aaKnown RBP-0.64□□□□□ -2.51
snR38snR38 AHC1Q12433 566 aa-0.64□□□□□ -2.51
snR38snR38 ASP3-2P0CX77 362 aa-0.65□□□□□ -2.51
snR38snR38 ASP3-3P0CX78 362 aa-0.65□□□□□ -2.51
snR38snR38 ASP3-4P0CX79 362 aa-0.65□□□□□ -2.51
snR38snR38 ASP3-1P0CZ17 362 aa-0.65□□□□□ -2.51
snR38snR38 KAR1P11927 433 aa-0.65□□□□□ -2.51
snR38snR38 CKA2P19454 339 aa-0.65□□□□□ -2.51
snR38snR38 NRG2P38082 220 aa-0.65□□□□□ -2.51
snR38snR38 KEL1P38853 1164 aaKnown RBP-0.65□□□□□ -2.51
snR38snR38 FHL1P39521 936 aa-0.65□□□□□ -2.51
snR38snR38 NNF1P47149 201 aa-0.65□□□□□ -2.51
snR38snR38 DIA3P52290 468 aa-0.65□□□□□ -2.51
snR38snR38 UBX2Q04228 584 aa-0.65□□□□□ -2.51
snR38snR38 YLR345WQ06137 509 aa-0.65□□□□□ -2.51
snR38snR38 CLP1Q08685 445 aaPredicted RBP-0.65□□□□□ -2.51
snR38snR38 BRR1Q99177 341 aaPredicted RBP-0.65□□□□□ -2.51
snR38snR38 MSI1P13712 422 aa-0.66□□□□□ -2.52
snR38snR38 BOS1P25385 244 aa-0.66□□□□□ -2.52
snR38snR38 YEF1P32622 495 aa-0.66□□□□□ -2.52
snR38snR38 COX13P32799 129 aa-0.66□□□□□ -2.52
snR38snR38 ICS2P38284 255 aa-0.66□□□□□ -2.52
snR38snR38 AFG3P39925 761 aa-0.66□□□□□ -2.52
snR38snR38 BUR6P40096 142 aa-0.66□□□□□ -2.52
snR38snR38 NIT2P47016 307 aa-0.66□□□□□ -2.52
snR38snR38 URB2P47108 1174 aa-0.66□□□□□ -2.52
snR38snR38 BUD22Q04347 519 aaKnown RBP-0.66□□□□□ -2.52
snR38snR38 YDR114CQ04597 100 aa-0.66□□□□□ -2.52
snR38snR38 TIM18Q08749 192 aa-0.66□□□□□ -2.52
snR38snR38 ARP7Q12406 477 aa-0.66□□□□□ -2.52
snR38snR38 EAF3Q12432 401 aa-0.66□□□□□ -2.52
snR38snR38 YBR085C-AO43137 85 aa-0.67□□□□□ -2.52
snR38snR38 CDC16P09798 840 aa-0.67□□□□□ -2.52
snR38snR38 FUS3P16892 353 aaKnown RBP-0.67□□□□□ -2.52
snR38snR38 SLY1P22213 666 aa-0.67□□□□□ -2.52
snR38snR38 ADH7P25377 361 aa-0.67□□□□□ -2.52
snR38snR38 TIP1P27654 210 aaPredicted RBP-0.67□□□□□ -2.52
Retrieved 100 of 5,963 RNA–protein pairs in 21.5 ms