RNA–Protein interactions for RNA: YOL013C

HRD1, Transcript of Ubiquitin-protein ligase, yeastyeast

Gene HRD1, Length 1,656 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HRD1YOL013C NBL1Q3E7Y6 73 aa3.25□□□□□ -1.89
HRD1YOL013C ESP1Q03018 1630 aa3.25□□□□□ -1.89
HRD1YOL013C KGD2P19262 463 aaPredicted RBP3.24□□□□□ -1.89
HRD1YOL013C MRPL25P23369 157 aa3.24□□□□□ -1.89
HRD1YOL013C MBR1P23493 339 aa3.24□□□□□ -1.89
HRD1YOL013C YJU2P28320 278 aaPredicted RBP3.24□□□□□ -1.89
HRD1YOL013C NDI1P32340 513 aa3.24□□□□□ -1.89
HRD1YOL013C MRP4P32902 394 aa3.24□□□□□ -1.89
HRD1YOL013C SOF1P33750 489 aaKnown RBP3.24□□□□□ -1.89
HRD1YOL013C MRPL37P36532 105 aa3.24□□□□□ -1.89
HRD1YOL013C ASC1P38011 319 aaKnown RBP3.24□□□□□ -1.89
HRD1YOL013C GDT1P38301 280 aaPredicted RBP3.24□□□□□ -1.89
HRD1YOL013C TIF5P38431 405 aaKnown RBP3.24□□□□□ -1.89
HRD1YOL013C SAP1P39955 897 aaKnown RBP3.24□□□□□ -1.89
HRD1YOL013C IAH1P41734 238 aa3.24□□□□□ -1.89
HRD1YOL013C FAR3P46671 204 aa3.24□□□□□ -1.89
HRD1YOL013C RPA34P47006 233 aaPredicted RBP3.24□□□□□ -1.89
HRD1YOL013C LSC1P53598 329 aaKnown RBP3.24□□□□□ -1.89
HRD1YOL013C PRM1P53835 661 aa3.24□□□□□ -1.89
HRD1YOL013C WAR1Q03631 944 aa3.24□□□□□ -1.89
HRD1YOL013C RPS10AQ08745 105 aaPredicted RBP3.24□□□□□ -1.89
HRD1YOL013C RRD2Q12461 358 aa3.24□□□□□ -1.89
HRD1YOL013C LEU4P06208 619 aaKnown RBP3.24□□□□□ -1.89
HRD1YOL013C PRB1P09232 635 aa3.24□□□□□ -1.89
HRD1YOL013C SRV2P17555 526 aaKnown RBP3.24□□□□□ -1.89
HRD1YOL013C CDC42P19073 191 aa3.24□□□□□ -1.89
HRD1YOL013C RNR3P21672 869 aaKnown RBP3.24□□□□□ -1.89
HRD1YOL013C SEC62P21825 274 aa3.24□□□□□ -1.89
HRD1YOL013C RDS1P25611 832 aa3.24□□□□□ -1.89
HRD1YOL013C HMX1P32339 317 aa3.24□□□□□ -1.89
HRD1YOL013C RIM1P32445 135 aaKnown RBP3.24□□□□□ -1.89
HRD1YOL013C RPF2P36160 344 aaKnown RBP3.24□□□□□ -1.89
HRD1YOL013C ARA1P38115 344 aa3.24□□□□□ -1.89
HRD1YOL013C PEX32P38292 413 aa3.24□□□□□ -1.89
HRD1YOL013C RFC3P38629 340 aa3.24□□□□□ -1.89
HRD1YOL013C UIP3P39547 235 aa3.24□□□□□ -1.89
HRD1YOL013C YMR147WP40218 223 aaKnown RBP3.24□□□□□ -1.89
HRD1YOL013C ULP2P40537 1034 aaPredicted RBP3.24□□□□□ -1.89
HRD1YOL013C CIN1P40987 1014 aa3.24□□□□□ -1.89
HRD1YOL013C RPS10BP46784 105 aaKnown RBP3.24□□□□□ -1.89
HRD1YOL013C YJL043WP47053 257 aa3.24□□□□□ -1.89
HRD1YOL013C URB2P47108 1174 aa3.24□□□□□ -1.89
HRD1YOL013C KEL2P50090 882 aa3.24□□□□□ -1.89
HRD1YOL013C ROG1P53118 685 aa3.24□□□□□ -1.89
HRD1YOL013C COP1P53622 1201 aaKnown RBP3.24□□□□□ -1.89
HRD1YOL013C ATP23P53722 227 aa3.24□□□□□ -1.89
HRD1YOL013C EKI1Q03764 534 aa3.24□□□□□ -1.89
HRD1YOL013C YLR297WQ05899 129 aa3.24□□□□□ -1.89
HRD1YOL013C LDB17Q12342 491 aa3.24□□□□□ -1.89
HRD1YOL013C MTR10Q99189 972 aa3.24□□□□□ -1.89
HRD1YOL013C SIN3P22579 1536 aa3.23□□□□□ -1.89
HRD1YOL013C STE2D6VTK4 431 aa3.23□□□□□ -1.89
HRD1YOL013C CHO2P05374 869 aaKnown RBP3.23□□□□□ -1.89
HRD1YOL013C PDE2P06776 526 aa3.23□□□□□ -1.89
HRD1YOL013C ARG80P07249 177 aa3.23□□□□□ -1.89
HRD1YOL013C CAR2P07991 424 aaKnown RBP3.23□□□□□ -1.89
HRD1YOL013C CHO1P08456 276 aa3.23□□□□□ -1.89
HRD1YOL013C MER1P16523 270 aa3.23□□□□□ -1.89
HRD1YOL013C BOS1P25385 244 aa3.23□□□□□ -1.89
HRD1YOL013C NTG1P31378 399 aa3.23□□□□□ -1.89
HRD1YOL013C COT1P32798 439 aa3.23□□□□□ -1.89
HRD1YOL013C MSN4P33749 630 aa3.23□□□□□ -1.89
HRD1YOL013C YKT6P36015 200 aaKnown RBP3.23□□□□□ -1.89
HRD1YOL013C LHS1P36016 881 aa3.23□□□□□ -1.89
HRD1YOL013C YKL070WP36087 169 aa3.23□□□□□ -1.89
HRD1YOL013C ICS2P38284 255 aa3.23□□□□□ -1.89
HRD1YOL013C ANS1P38832 159 aa3.23□□□□□ -1.89
HRD1YOL013C GPI16P38875 610 aa3.23□□□□□ -1.89
HRD1YOL013C MNL1P38888 796 aa3.23□□□□□ -1.89
HRD1YOL013C EXO1P39875 702 aa3.23□□□□□ -1.89
HRD1YOL013C SCC4P40090 624 aa3.23□□□□□ -1.89
HRD1YOL013C GAT1P43574 510 aa3.23□□□□□ -1.89
HRD1YOL013C PTR3P43606 678 aa3.23□□□□□ -1.89
HRD1YOL013C YGL108CP53139 140 aa3.23□□□□□ -1.89
HRD1YOL013C SLG1P54867 378 aa3.23□□□□□ -1.89
HRD1YOL013C INP2Q03824 705 aa3.23□□□□□ -1.89
HRD1YOL013C CYK3Q07533 885 aa3.23□□□□□ -1.89
HRD1YOL013C PCL8Q08966 492 aa3.23□□□□□ -1.89
HRD1YOL013C SUP35P05453 685 aaKnown RBP3.22□□□□□ -1.89
HRD1YOL013C CDC37P06101 506 aaKnown RBP3.22□□□□□ -1.89
HRD1YOL013C PUT2P07275 575 aa3.22□□□□□ -1.89
HRD1YOL013C AQY1P0CD91 305 aa3.22□□□□□ -1.89
HRD1YOL013C GAC1P28006 793 aa3.22□□□□□ -1.89
HRD1YOL013C BEM1P29366 551 aa3.22□□□□□ -1.89
HRD1YOL013C DOA4P32571 926 aa3.22□□□□□ -1.89
HRD1YOL013C RPL32P38061 130 aaKnown RBP3.22□□□□□ -1.89
HRD1YOL013C TSC10P38342 320 aa3.22□□□□□ -1.89
HRD1YOL013C YHR210CP38893 341 aa3.22□□□□□ -1.89
HRD1YOL013C PSA1P41940 361 aaKnown RBP3.22□□□□□ -1.89
HRD1YOL013C YFL015CP43578 164 aa3.22□□□□□ -1.89
HRD1YOL013C ATG27P46989 271 aa3.22□□□□□ -1.89
HRD1YOL013C IST1P53843 298 aaPredicted RBP3.22□□□□□ -1.89
HRD1YOL013C CSI1Q04368 295 aa3.22□□□□□ -1.89
HRD1YOL013C MDM30Q05930 598 aa3.22□□□□□ -1.89
HRD1YOL013C CLP1Q08685 445 aaPredicted RBP3.22□□□□□ -1.89
HRD1YOL013C RUD3Q12234 484 aaKnown RBP3.22□□□□□ -1.89
HRD1YOL013C YIL002W-AQ3E7Z5 69 aa3.22□□□□□ -1.89
HRD1YOL013C COR1P07256 457 aa3.21□□□□□ -1.9
HRD1YOL013C SPS4P09937 338 aa3.21□□□□□ -1.9
HRD1YOL013C GAL3P13045 520 aa3.21□□□□□ -1.9
Retrieved 100 of 5,963 RNA–protein pairs in 51.8 ms