RNA–Protein interactions for RNA: YNL138W-A

YSF3, Transcript of Component of the SF3b subcomplex of the U2 snRNP, yeastyeast

Gene YSF3, Length 258 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YSF3YNL138W-A HEL2Q05580 639 aaKnown RBP3.49□□□□□ -1.85
YSF3YNL138W-A YDL144CQ07589 356 aa3.49□□□□□ -1.85
YSF3YNL138W-A SPE4Q12455 300 aa3.49□□□□□ -1.85
YSF3YNL138W-A NKP1Q12493 238 aa3.49□□□□□ -1.85
YSF3YNL138W-A POL2P21951 2222 aaKnown RBP3.49□□□□□ -1.85
YSF3YNL138W-A AAC3P18238 307 aa3.48□□□□□ -1.85
YSF3YNL138W-A WBP1P33767 430 aaKnown RBP3.48□□□□□ -1.85
YSF3YNL138W-A HEL1P36113 551 aa3.48□□□□□ -1.85
YSF3YNL138W-A CHS6P40955 746 aa3.48□□□□□ -1.85
YSF3YNL138W-A RMD8P43620 662 aa3.48□□□□□ -1.85
YSF3YNL138W-A ERG26P53199 349 aaKnown RBP3.48□□□□□ -1.85
YSF3YNL138W-A RPT6Q01939 405 aaKnown RBP3.48□□□□□ -1.85
YSF3YNL138W-A RSF1Q05043 376 aa3.48□□□□□ -1.85
YSF3YNL138W-A NRT1Q08485 598 aa3.48□□□□□ -1.85
YSF3YNL138W-A YPL272CQ08984 517 aa3.48□□□□□ -1.85
YSF3YNL138W-A TAH18Q12181 623 aa3.48□□□□□ -1.85
YSF3YNL138W-A ARP6Q12509 438 aa3.48□□□□□ -1.85
YSF3YNL138W-A ARG81P05085 880 aa3.47□□□□□ -1.85
YSF3YNL138W-A PUT2P07275 575 aa3.47□□□□□ -1.85
YSF3YNL138W-A RPL43AP0CX25 92 aaKnown RBP3.47□□□□□ -1.85
YSF3YNL138W-A RPL43BP0CX26 92 aa3.47□□□□□ -1.85
YSF3YNL138W-A BAR1P12630 587 aa3.47□□□□□ -1.85
YSF3YNL138W-A GLN3P18494 730 aa3.47□□□□□ -1.85
YSF3YNL138W-A GFD2P25370 566 aaKnown RBP3.47□□□□□ -1.85
YSF3YNL138W-A ANP1P32629 500 aa3.47□□□□□ -1.85
YSF3YNL138W-A ROT2P38138 954 aa3.47□□□□□ -1.85
YSF3YNL138W-A NAB3P38996 802 aaKnown RBP RIP-Chip data3.47□□□□□ -1.85not detected
YSF3YNL138W-A AZF1P41696 914 aa3.47□□□□□ -1.85
YSF3YNL138W-A UPF3P48412 387 aaKnown RBP3.47□□□□□ -1.85
YSF3YNL138W-A MDM1Q01846 1127 aa3.47□□□□□ -1.85
YSF3YNL138W-A YDR415CQ04033 374 aaPredicted RBP3.47□□□□□ -1.85
YSF3YNL138W-A BUD22Q04347 519 aaKnown RBP3.47□□□□□ -1.85
YSF3YNL138W-A NDD1Q08887 554 aa3.47□□□□□ -1.85
YSF3YNL138W-A HUA2Q12134 243 aa3.47□□□□□ -1.85
YSF3YNL138W-A NCB2Q92317 146 aa3.47□□□□□ -1.85
YSF3YNL138W-A HAP2P06774 265 aa3.46□□□□□ -1.86
YSF3YNL138W-A RIP1P08067 215 aa3.46□□□□□ -1.86
YSF3YNL138W-A YIH1P25637 258 aa3.46□□□□□ -1.86
YSF3YNL138W-A CMK1P27466 446 aaKnown RBP3.46□□□□□ -1.86
YSF3YNL138W-A GPI10P30777 616 aa3.46□□□□□ -1.86
YSF3YNL138W-A IMP2'P32351 346 aa3.46□□□□□ -1.86
YSF3YNL138W-A VPH1P32563 840 aaKnown RBP3.46□□□□□ -1.86
YSF3YNL138W-A SWE1P32944 819 aa3.46□□□□□ -1.86
YSF3YNL138W-A MTR2P34232 184 aaKnown RBP3.46□□□□□ -1.86
YSF3YNL138W-A RKM3P38222 552 aa3.46□□□□□ -1.86
YSF3YNL138W-A NOP16P40007 231 aaKnown RBP3.46□□□□□ -1.86
YSF3YNL138W-A CSM2P40465 213 aa3.46□□□□□ -1.86
YSF3YNL138W-A YPS6P40583 537 aa3.46□□□□□ -1.86
YSF3YNL138W-A PTR3P43606 678 aa3.46□□□□□ -1.86
YSF3YNL138W-A ATG27P46989 271 aa3.46□□□□□ -1.86
YSF3YNL138W-A PYK2P52489 506 aaKnown RBP3.46□□□□□ -1.86
YSF3YNL138W-A IMP4P53941 290 aaKnown RBP3.46□□□□□ -1.86
YSF3YNL138W-A EFM6P53970 246 aa3.46□□□□□ -1.86
YSF3YNL138W-A MYO5Q04439 1219 aaKnown RBP3.46□□□□□ -1.86
YSF3YNL138W-A YLR281CQ05863 155 aa3.46□□□□□ -1.86
YSF3YNL138W-A YLR352WQ06479 807 aa3.46□□□□□ -1.86
YSF3YNL138W-A GRS2Q06817 618 aa3.46□□□□□ -1.86
YSF3YNL138W-A LUC7Q07508 261 aaPredicted RBP3.46□□□□□ -1.86
YSF3YNL138W-A YDL121CQ07541 149 aa3.46□□□□□ -1.86
YSF3YNL138W-A HIF1Q12373 385 aa3.46□□□□□ -1.86
YSF3YNL138W-A YIL046W-AQ3E7Z4 54 aa3.46□□□□□ -1.86
YSF3YNL138W-A HFA1P32874 2273 aa3.45□□□□□ -1.86
YSF3YNL138W-A SEM1O94742 89 aa3.45□□□□□ -1.86
YSF3YNL138W-A MF(ALPHA)1P01149 165 aa3.45□□□□□ -1.86
YSF3YNL138W-A COX4P04037 155 aa3.45□□□□□ -1.86
YSF3YNL138W-A CDC23P16522 626 aa3.45□□□□□ -1.86
YSF3YNL138W-A RPS2P25443 254 aaKnown RBP3.45□□□□□ -1.86
YSF3YNL138W-A IMG1P25626 169 aa3.45□□□□□ -1.86
YSF3YNL138W-A SEC1P30619 724 aaKnown RBP3.45□□□□□ -1.86
YSF3YNL138W-A TRS65P32893 560 aa3.45□□□□□ -1.86
YSF3YNL138W-A YBL055CP34220 418 aaPredicted RBP3.45□□□□□ -1.86
YSF3YNL138W-A PHD1P36093 366 aa3.45□□□□□ -1.86
YSF3YNL138W-A WSC4P38739 605 aa3.45□□□□□ -1.86
YSF3YNL138W-A BZZ1P38822 633 aa3.45□□□□□ -1.86
YSF3YNL138W-A RGI2P40188 164 aa3.45□□□□□ -1.86
YSF3YNL138W-A ZPR1P53303 486 aaKnown RBP3.45□□□□□ -1.86
YSF3YNL138W-A DNL4Q08387 944 aaPredicted RBP3.45□□□□□ -1.86
YSF3YNL138W-A YPL278CQ08990 100 aa3.45□□□□□ -1.86
YSF3YNL138W-A SPE3Q12074 293 aaKnown RBP3.45□□□□□ -1.86
YSF3YNL138W-A BUD5P25300 642 aaPredicted RBP3.44□□□□□ -1.86
YSF3YNL138W-A RPN2P32565 945 aaKnown RBP3.44□□□□□ -1.86
YSF3YNL138W-A SRX1P36077 127 aa3.44□□□□□ -1.86
YSF3YNL138W-A RXT2P38255 430 aa3.44□□□□□ -1.86
YSF3YNL138W-A ICS2P38284 255 aa3.44□□□□□ -1.86
YSF3YNL138W-A YER130CP39959 443 aa3.44□□□□□ -1.86
YSF3YNL138W-A YAT2P40017 923 aa3.44□□□□□ -1.86
YSF3YNL138W-A TMA108P40462 946 aa3.44□□□□□ -1.86
YSF3YNL138W-A YIR014WP40570 242 aa3.44□□□□□ -1.86
YSF3YNL138W-A AXL1P40851 1208 aa3.44□□□□□ -1.86
YSF3YNL138W-A FAR3P46671 204 aa3.44□□□□□ -1.86
YSF3YNL138W-A STB2P46679 850 aa3.44□□□□□ -1.86
YSF3YNL138W-A HOS2P53096 452 aaPredicted RBP3.44□□□□□ -1.86
YSF3YNL138W-A MLC1P53141 149 aa3.44□□□□□ -1.86
YSF3YNL138W-A SMM1P53720 384 aaKnown RBP3.44□□□□□ -1.86
YSF3YNL138W-A ADA2Q02336 434 aa3.44□□□□□ -1.86
YSF3YNL138W-A MSC1Q03104 513 aa3.44□□□□□ -1.86
YSF3YNL138W-A COQ9Q05779 260 aa3.44□□□□□ -1.86
YSF3YNL138W-A DIC1Q06143 298 aa3.44□□□□□ -1.86
YSF3YNL138W-A FMP45Q07651 309 aa3.44□□□□□ -1.86
YSF3YNL138W-A NOP58Q12499 511 aaKnown RBP3.44□□□□□ -1.86
Retrieved 100 of 5,963 RNA–protein pairs in 23.6 ms