RNA–Protein interactions for RNA: YMR173W

DDR48, Transcript of DNA damage-responsive protein, yeastyeast

Gene DDR48, Length 1,293 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
DDR48YMR173W TMA108P40462 946 aa2.43□□□□□ -2.02
DDR48YMR173W SYG1P40528 902 aa2.43□□□□□ -2.02
DDR48YMR173W TRS85P46944 698 aa2.43□□□□□ -2.02
DDR48YMR173W POP6P53218 158 aa2.43□□□□□ -2.02
DDR48YMR173W MRP51Q02950 344 aa2.43□□□□□ -2.02
DDR48YMR173W VPS38Q05919 439 aa2.43□□□□□ -2.02
DDR48YMR173W YCR100CP25606 316 aa2.42□□□□□ -2.02
DDR48YMR173W GYP6P32806 458 aa2.42□□□□□ -2.02
DDR48YMR173W MUD2P36084 527 aaKnown RBP2.42□□□□□ -2.02
DDR48YMR173W STB6P36085 766 aa2.42□□□□□ -2.02
DDR48YMR173W SSN8P47821 323 aa2.42□□□□□ -2.02
DDR48YMR173W PNG1Q02890 363 aa2.42□□□□□ -2.02
DDR48YMR173W RSN1Q03516 953 aa2.42□□□□□ -2.02
DDR48YMR173W HER2Q03557 464 aa2.42□□□□□ -2.02
DDR48YMR173W FDH1Q08911 376 aa2.42□□□□□ -2.02
DDR48YMR173W CTI6Q08923 506 aa2.42□□□□□ -2.02
DDR48YMR173W SEC39Q12745 709 aa2.42□□□□□ -2.02
DDR48YMR173W YDL007C-AQ2V2Q0 85 aa2.42□□□□□ -2.02
DDR48YMR173W LEU4P06208 619 aaKnown RBP2.41□□□□□ -2.02
DDR48YMR173W RPL31BP0C2H9 113 aaKnown RBP2.41□□□□□ -2.02
DDR48YMR173W PET123P17558 318 aa2.41□□□□□ -2.02
DDR48YMR173W OLE1P21147 510 aaKnown RBP2.41□□□□□ -2.02
DDR48YMR173W RVS161P25343 265 aaKnown RBP2.41□□□□□ -2.02
DDR48YMR173W KEL1P38853 1164 aaKnown RBP2.41□□□□□ -2.02
DDR48YMR173W SGN1P40561 250 aaKnown RBP RIP-Chip data2.41□□□□□ -2.02not detected
DDR48YMR173W MET28P40573 187 aa2.41□□□□□ -2.02
DDR48YMR173W SHY1P53266 389 aa2.41□□□□□ -2.02
DDR48YMR173W MDG1P53885 366 aa2.41□□□□□ -2.02
DDR48YMR173W TSA2Q04120 196 aa2.41□□□□□ -2.02
DDR48YMR173W HRI1Q05905 244 aaKnown RBP2.41□□□□□ -2.02
DDR48YMR173W YLL032CQ07834 825 aaKnown RBP RIP-Chip data2.41□□□□□ -2.02not detected
DDR48YMR173W RRD2Q12461 358 aa2.41□□□□□ -2.02
DDR48YMR173W RAD61Q99359 647 aa2.41□□□□□ -2.02
DDR48YMR173W YAR066WP0CX18 203 aa2.4□□□□□ -2.03
DDR48YMR173W YHR214WP0CX19 203 aa2.4□□□□□ -2.03
DDR48YMR173W PIM1P36775 1133 aa2.4□□□□□ -2.03
DDR48YMR173W YBR225WP38321 900 aa2.4□□□□□ -2.03
DDR48YMR173W MST28P39552 234 aa2.4□□□□□ -2.03
DDR48YMR173W ISC1P40015 477 aaKnown RBP2.4□□□□□ -2.03
DDR48YMR173W PRM5P40476 318 aa2.4□□□□□ -2.03
DDR48YMR173W UPF3P48412 387 aaKnown RBP2.4□□□□□ -2.03
DDR48YMR173W MRX6P48564 524 aa2.4□□□□□ -2.03
DDR48YMR173W TAP42Q04372 366 aa2.4□□□□□ -2.03
DDR48YMR173W YPL199CQ08954 240 aa2.4□□□□□ -2.03
DDR48YMR173W WTM1Q12363 437 aaKnown RBP2.4□□□□□ -2.03
DDR48YMR173W GAL80P04387 435 aa2.39□□□□□ -2.03
DDR48YMR173W CBS1P14066 229 aa2.39□□□□□ -2.03
DDR48YMR173W PEP3P27801 918 aa2.39□□□□□ -2.03
DDR48YMR173W CBP4P37267 147 aa2.39□□□□□ -2.03
DDR48YMR173W PAN6P40459 309 aa2.39□□□□□ -2.03
DDR48YMR173W POP1P41812 875 aa2.39□□□□□ -2.03
DDR48YMR173W PET130P47065 347 aa2.39□□□□□ -2.03
DDR48YMR173W OCA1P50946 238 aaPredicted RBP2.39□□□□□ -2.03
DDR48YMR173W MRD1Q06106 887 aaKnown RBP2.39□□□□□ -2.03
DDR48YMR173W DAL2P25335 343 aa2.38□□□□□ -2.03
DDR48YMR173W SEC66P33754 206 aa2.38□□□□□ -2.03
DDR48YMR173W REG2P38232 338 aa2.38□□□□□ -2.03
DDR48YMR173W OST1P41543 476 aaKnown RBP2.38□□□□□ -2.03
DDR48YMR173W YGL108CP53139 140 aa2.38□□□□□ -2.03
DDR48YMR173W RTS3P53289 263 aa2.38□□□□□ -2.03
DDR48YMR173W GOR1P53839 350 aa2.38□□□□□ -2.03
DDR48YMR173W VPS75P53853 264 aa2.38□□□□□ -2.03
DDR48YMR173W NCS2P53923 493 aaPredicted RBP2.38□□□□□ -2.03
DDR48YMR173W RHO2P06781 192 aa2.37□□□□□ -2.03
DDR48YMR173W SAM1P10659 382 aaKnown RBP2.37□□□□□ -2.03
DDR48YMR173W SAM2P19358 384 aaKnown RBP2.37□□□□□ -2.03
DDR48YMR173W TIP1P27654 210 aaPredicted RBP2.37□□□□□ -2.03
DDR48YMR173W MSG5P38590 489 aa2.37□□□□□ -2.03
DDR48YMR173W TFG2P41896 400 aaPredicted RBP2.37□□□□□ -2.03
DDR48YMR173W WWM1P43582 211 aaKnown RBP2.37□□□□□ -2.03
DDR48YMR173W CAF130P53280 1122 aaPredicted RBP2.37□□□□□ -2.03
DDR48YMR173W YMR181CQ03231 154 aa2.37□□□□□ -2.03
DDR48YMR173W PDS5Q04264 1277 aa2.37□□□□□ -2.03
DDR48YMR173W MUM3Q08750 479 aa2.37□□□□□ -2.03
DDR48YMR173W ATP10P18496 279 aa2.36□□□□□ -2.03
DDR48YMR173W YCR041WP37265 110 aa2.36□□□□□ -2.03
DDR48YMR173W YIP1P53039 248 aa2.36□□□□□ -2.03
DDR48YMR173W TWF1P53250 332 aa2.36□□□□□ -2.03
DDR48YMR173W MTM1P53320 366 aa2.36□□□□□ -2.03
DDR48YMR173W HXT11P54862 567 aa2.36□□□□□ -2.03
DDR48YMR173W PKH2Q12236 1081 aaKnown RBP2.36□□□□□ -2.03
DDR48YMR173W FOB1O13329 566 aa2.35□□□□□ -2.03
DDR48YMR173W GCN4P03069 281 aa2.35□□□□□ -2.03
DDR48YMR173W AAC3P18238 307 aa2.35□□□□□ -2.03
DDR48YMR173W OCA4P25366 362 aa2.35□□□□□ -2.03
DDR48YMR173W REC114P32841 428 aa2.35□□□□□ -2.03
DDR48YMR173W HCS1P34243 683 aa2.35□□□□□ -2.03
DDR48YMR173W RIB5P38145 238 aa2.35□□□□□ -2.03
DDR48YMR173W CCT2P39076 527 aaKnown RBP2.35□□□□□ -2.03
DDR48YMR173W VMA13P41807 478 aaKnown RBP2.35□□□□□ -2.03
DDR48YMR173W PEX25Q02969 394 aa2.35□□□□□ -2.03
DDR48YMR173W IMH1Q06704 911 aaKnown RBP2.35□□□□□ -2.03
DDR48YMR173W TIM18Q08749 192 aa2.35□□□□□ -2.03
DDR48YMR173W YDR056CQ12025 205 aa2.35□□□□□ -2.03
DDR48YMR173W YDL012CQ12489 107 aa2.35□□□□□ -2.03
DDR48YMR173W NFT1P0CE68 1218 aa2.34□□□□□ -2.03
DDR48YMR173W RPS8AP0CX39 200 aaKnown RBP2.34□□□□□ -2.03
DDR48YMR173W RPS8BP0CX40 200 aaKnown RBP2.34□□□□□ -2.03
DDR48YMR173W HSP26P15992 214 aaKnown RBP RIP-Chip data2.34□□□□□ -2.03not detected
DDR48YMR173W RAD14P28519 371 aa2.34□□□□□ -2.03
Retrieved 100 of 5,963 RNA–protein pairs in 28.1 ms