RNA–Protein interactions for RNA: YMR067C

UBX4, Transcript of UBX domain-containing protein that interacts with Cdc48p, yeastyeast

Gene UBX4, Length 1,251 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBX4YMR067C YDL007C-AQ2V2Q0 85 aa2.69□□□□□ -1.98
UBX4YMR067C GAL80P04387 435 aa2.68□□□□□ -1.98
UBX4YMR067C YAR066WP0CX18 203 aa2.68□□□□□ -1.98
UBX4YMR067C YHR214WP0CX19 203 aa2.68□□□□□ -1.98
UBX4YMR067C CLN3P13365 580 aa2.68□□□□□ -1.98
UBX4YMR067C CBS1P14066 229 aa2.68□□□□□ -1.98
UBX4YMR067C SWD3P38123 315 aa2.68□□□□□ -1.98
UBX4YMR067C POP1P41812 875 aa2.68□□□□□ -1.98
UBX4YMR067C MRX6P48564 524 aa2.68□□□□□ -1.98
UBX4YMR067C MDG1P53885 366 aa2.68□□□□□ -1.98
UBX4YMR067C RPC11Q04307 110 aaPredicted RBP2.68□□□□□ -1.98
UBX4YMR067C RBD2Q12270 262 aa2.68□□□□□ -1.98
UBX4YMR067C RPL31BP0C2H9 113 aaKnown RBP2.67□□□□□ -1.98
UBX4YMR067C PET123P17558 318 aa2.67□□□□□ -1.98
UBX4YMR067C RVS161P25343 265 aaKnown RBP2.67□□□□□ -1.98
UBX4YMR067C YCR100CP25606 316 aa2.67□□□□□ -1.98
UBX4YMR067C CDC60P26637 1090 aaKnown RBP2.67□□□□□ -1.98
UBX4YMR067C GYP6P32806 458 aa2.67□□□□□ -1.98
UBX4YMR067C STB6P36085 766 aa2.67□□□□□ -1.98
UBX4YMR067C ISC1P40015 477 aaKnown RBP2.67□□□□□ -1.98
UBX4YMR067C TMA108P40462 946 aa2.67□□□□□ -1.98
UBX4YMR067C OCA1P50946 238 aaPredicted RBP2.67□□□□□ -1.98
UBX4YMR067C CAF130P53280 1122 aaPredicted RBP2.67□□□□□ -1.98
UBX4YMR067C HER2Q03557 464 aa2.67□□□□□ -1.98
UBX4YMR067C YMR027WQ04371 470 aa2.67□□□□□ -1.98
UBX4YMR067C YLL032CQ07834 825 aaKnown RBP RIP-Chip data2.67□□□□□ -1.98not detected
UBX4YMR067C SEC39Q12745 709 aa2.67□□□□□ -1.98
UBX4YMR067C OLE1P21147 510 aaKnown RBP2.66□□□□□ -1.98
UBX4YMR067C SGN1P40561 250 aaKnown RBP RIP-Chip data2.66□□□□□ -1.98not detected
UBX4YMR067C WWM1P43582 211 aaKnown RBP2.66□□□□□ -1.98
UBX4YMR067C PET130P47065 347 aa2.66□□□□□ -1.98
UBX4YMR067C TIS11P47977 285 aa2.66□□□□□ -1.98
UBX4YMR067C SHY1P53266 389 aa2.66□□□□□ -1.98
UBX4YMR067C HRI1Q05905 244 aaKnown RBP2.66□□□□□ -1.98
UBX4YMR067C ENT1Q12518 454 aa2.66□□□□□ -1.98
UBX4YMR067C ADH2P00331 348 aaKnown RBP2.65□□□□□ -1.99
UBX4YMR067C DAL2P25335 343 aa2.65□□□□□ -1.99
UBX4YMR067C PEP3P27801 918 aa2.65□□□□□ -1.99
UBX4YMR067C REC114P32841 428 aa2.65□□□□□ -1.99
UBX4YMR067C YBR225WP38321 900 aa2.65□□□□□ -1.99
UBX4YMR067C MST28P39552 234 aa2.65□□□□□ -1.99
UBX4YMR067C YMR147WP40218 223 aaKnown RBP2.65□□□□□ -1.99
UBX4YMR067C PRM5P40476 318 aa2.65□□□□□ -1.99
UBX4YMR067C TRS85P46944 698 aa2.65□□□□□ -1.99
UBX4YMR067C UPF3P48412 387 aaKnown RBP2.65□□□□□ -1.99
UBX4YMR067C GOR1P53839 350 aa2.65□□□□□ -1.99
UBX4YMR067C NCS2P53923 493 aaPredicted RBP2.65□□□□□ -1.99
UBX4YMR067C IOC4Q04213 475 aa2.65□□□□□ -1.99
UBX4YMR067C PDS5Q04264 1277 aa2.65□□□□□ -1.99
UBX4YMR067C MUM3Q08750 479 aa2.65□□□□□ -1.99
UBX4YMR067C GCN4P03069 281 aa2.64□□□□□ -1.99
UBX4YMR067C RHO2P06781 192 aa2.64□□□□□ -1.99
UBX4YMR067C AAC3P18238 307 aa2.64□□□□□ -1.99
UBX4YMR067C OCA4P25366 362 aa2.64□□□□□ -1.99
UBX4YMR067C PIM1P36775 1133 aa2.64□□□□□ -1.99
UBX4YMR067C PAN6P40459 309 aa2.64□□□□□ -1.99
UBX4YMR067C YGL108CP53139 140 aa2.64□□□□□ -1.99
UBX4YMR067C VPS75P53853 264 aa2.64□□□□□ -1.99
UBX4YMR067C RSN1Q03516 953 aa2.64□□□□□ -1.99
UBX4YMR067C WTM1Q12363 437 aaKnown RBP2.64□□□□□ -1.99
UBX4YMR067C RAD61Q99359 647 aa2.64□□□□□ -1.99
UBX4YMR067C FOB1O13329 566 aa2.63□□□□□ -1.99
UBX4YMR067C SAM1P10659 382 aaKnown RBP2.63□□□□□ -1.99
UBX4YMR067C SAM2P19358 384 aaKnown RBP2.63□□□□□ -1.99
UBX4YMR067C SEC66P33754 206 aa2.63□□□□□ -1.99
UBX4YMR067C KEL1P38853 1164 aaKnown RBP2.63□□□□□ -1.99
UBX4YMR067C MET28P40573 187 aa2.63□□□□□ -1.99
UBX4YMR067C OST1P41543 476 aaKnown RBP2.63□□□□□ -1.99
UBX4YMR067C RMD8P43620 662 aa2.63□□□□□ -1.99
UBX4YMR067C YDR056CQ12025 205 aa2.63□□□□□ -1.99
UBX4YMR067C YCR041WP37265 110 aa2.62□□□□□ -1.99
UBX4YMR067C RIB5P38145 238 aa2.62□□□□□ -1.99
UBX4YMR067C CST26P38226 397 aa2.62□□□□□ -1.99
UBX4YMR067C NCA3P46955 337 aa2.62□□□□□ -1.99
UBX4YMR067C TWF1P53250 332 aa2.62□□□□□ -1.99
UBX4YMR067C YMR181CQ03231 154 aa2.62□□□□□ -1.99
UBX4YMR067C FDH1Q08911 376 aa2.62□□□□□ -1.99
UBX4YMR067C LSB5P25369 354 aa2.61□□□□□ -1.99
UBX4YMR067C TIP1P27654 210 aaPredicted RBP2.61□□□□□ -1.99
UBX4YMR067C LAM5P43560 674 aa2.61□□□□□ -1.99
UBX4YMR067C YIP1P53039 248 aa2.61□□□□□ -1.99
UBX4YMR067C RMD9P53140 646 aaKnown RBP2.61□□□□□ -1.99
UBX4YMR067C PEX25Q02969 394 aa2.61□□□□□ -1.99
UBX4YMR067C TAP42Q04372 366 aa2.61□□□□□ -1.99
UBX4YMR067C MRD1Q06106 887 aaKnown RBP2.61□□□□□ -1.99
UBX4YMR067C PKH2Q12236 1081 aaKnown RBP2.61□□□□□ -1.99
UBX4YMR067C RRD2Q12461 358 aa2.61□□□□□ -1.99
UBX4YMR067C ATP10P18496 279 aa2.6□□□□□ -1.99
UBX4YMR067C SPB1P25582 841 aaPredicted RBP2.6□□□□□ -1.99
UBX4YMR067C CMC1P36064 111 aa2.6□□□□□ -1.99
UBX4YMR067C MSG5P38590 489 aa2.6□□□□□ -1.99
UBX4YMR067C TFG2P41896 400 aaPredicted RBP2.6□□□□□ -1.99
UBX4YMR067C DSL1P53847 754 aa2.6□□□□□ -1.99
UBX4YMR067C YDR239CQ03780 787 aa2.6□□□□□ -1.99
UBX4YMR067C TIM18Q08749 192 aa2.6□□□□□ -1.99
UBX4YMR067C ATG29Q12092 213 aa2.6□□□□□ -1.99
UBX4YMR067C HIS4P00815 799 aaKnown RBP2.59□□□□□ -1.99
UBX4YMR067C RAD14P28519 371 aa2.59□□□□□ -1.99
UBX4YMR067C AFG1P32317 509 aa2.59□□□□□ -1.99
UBX4YMR067C ECM25P32525 599 aa2.59□□□□□ -1.99
Retrieved 100 of 5,963 RNA–protein pairs in 19.8 ms