RNA–Protein interactions for RNA: YLR247C

IRC20, Transcript of E3 ubiquitin ligase and putative helicase, yeastyeast

Gene IRC20, Length 4,671 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
IRC20YLR247C FSH1P38777 243 aaKnown RBP1.78□□□□□ -2.12
IRC20YLR247C UBA4P38820 440 aa1.78□□□□□ -2.12
IRC20YLR247C EGD2P38879 174 aaKnown RBP1.78□□□□□ -2.12
IRC20YLR247C ZRG8P40021 1076 aa1.78□□□□□ -2.12
IRC20YLR247C CFD1P40558 293 aa1.78□□□□□ -2.12
IRC20YLR247C MSS2P40990 351 aa1.78□□□□□ -2.12
IRC20YLR247C FAR7P43592 221 aa1.78□□□□□ -2.12
IRC20YLR247C YJL132WP47014 750 aa1.78□□□□□ -2.12
IRC20YLR247C LIA1P47120 325 aaKnown RBP1.78□□□□□ -2.12
IRC20YLR247C ARI1P53111 347 aaKnown RBP1.78□□□□□ -2.12
IRC20YLR247C ELA1P53861 379 aaPredicted RBP1.78□□□□□ -2.12
IRC20YLR247C CTL1Q03220 320 aaKnown RBP1.78□□□□□ -2.12
IRC20YLR247C RTN1Q04947 295 aaKnown RBP1.78□□□□□ -2.12
IRC20YLR247C FAR10Q06001 478 aa1.78□□□□□ -2.12
IRC20YLR247C ASA1Q06822 443 aa1.78□□□□□ -2.12
IRC20YLR247C AKR2Q12013 749 aa1.78□□□□□ -2.12
IRC20YLR247C PRR2Q12310 699 aa1.78□□□□□ -2.12
IRC20YLR247C TEF1P02994 458 aaKnown RBP1.78□□□□□ -2.13
IRC20YLR247C PHO4P07270 312 aaKnown RBP1.78□□□□□ -2.13
IRC20YLR247C CBS2P14905 389 aa1.78□□□□□ -2.13
IRC20YLR247C GUK1P15454 187 aaKnown RBP1.78□□□□□ -2.13
IRC20YLR247C FUS3P16892 353 aaKnown RBP1.78□□□□□ -2.13
IRC20YLR247C FCY2P17064 533 aa1.78□□□□□ -2.13
IRC20YLR247C SPO16P17122 198 aa1.78□□□□□ -2.13
IRC20YLR247C PRE9P23638 258 aaKnown RBP1.78□□□□□ -2.13
IRC20YLR247C OCA4P25366 362 aa1.78□□□□□ -2.13
IRC20YLR247C PEX3P28795 441 aa1.78□□□□□ -2.13
IRC20YLR247C ASF2P32448 525 aaPredicted RBP1.78□□□□□ -2.13
IRC20YLR247C UGP1P32861 499 aaKnown RBP1.78□□□□□ -2.13
IRC20YLR247C COS8P38723 381 aa1.78□□□□□ -2.13
IRC20YLR247C CCT5P40413 562 aaKnown RBP1.78□□□□□ -2.13
IRC20YLR247C UBP7P40453 1071 aa1.78□□□□□ -2.13
IRC20YLR247C PRK1P40494 810 aa1.78□□□□□ -2.13
IRC20YLR247C PCI8P40512 444 aa1.78□□□□□ -2.13
IRC20YLR247C SMK1P41808 388 aa1.78□□□□□ -2.13
IRC20YLR247C DAK2P43550 591 aa1.78□□□□□ -2.13
IRC20YLR247C EMC2P47133 292 aaKnown RBP1.78□□□□□ -2.13
IRC20YLR247C YDL183CP48569 320 aa1.78□□□□□ -2.13
IRC20YLR247C ASN1P49089 572 aaKnown RBP1.78□□□□□ -2.13
IRC20YLR247C MNN10P50108 393 aaKnown RBP1.78□□□□□ -2.13
IRC20YLR247C BRR6P53062 197 aa1.78□□□□□ -2.13
IRC20YLR247C MND1P53102 219 aa1.78□□□□□ -2.13
IRC20YLR247C PEF1P53238 335 aa1.78□□□□□ -2.13
IRC20YLR247C SLX9P53251 210 aaPredicted RBP1.78□□□□□ -2.13
IRC20YLR247C SUN4P53616 420 aa1.78□□□□□ -2.13
IRC20YLR247C NRD1P53617 575 aaKnown RBP RIP-Chip data1.78□□□□□ -2.13not detected
IRC20YLR247C DSE4P53753 1117 aa1.78□□□□□ -2.13
IRC20YLR247C SNO2P53823 222 aa1.78□□□□□ -2.13
IRC20YLR247C CUZ1P53899 274 aa1.78□□□□□ -2.13
IRC20YLR247C YNL040WP53960 456 aaPredicted RBP1.78□□□□□ -2.13
IRC20YLR247C YPL109CQ02981 657 aa1.78□□□□□ -2.13
IRC20YLR247C YDR109CQ04585 715 aa1.78□□□□□ -2.13
IRC20YLR247C STE23Q06010 1027 aa1.78□□□□□ -2.13
IRC20YLR247C YLR456WQ06199 204 aa1.78□□□□□ -2.13
IRC20YLR247C CBC2Q08920 208 aaKnown RBP RIP-Chip data1.78□□□□□ -2.13not detected
IRC20YLR247C RTT10Q08924 1013 aa1.78□□□□□ -2.13
IRC20YLR247C YLR108CQ12259 485 aa1.78□□□□□ -2.13
IRC20YLR247C INH1P01097 85 aa1.77□□□□□ -2.13
IRC20YLR247C ADE4P04046 510 aaKnown RBP1.77□□□□□ -2.13
IRC20YLR247C SPS4P09937 338 aa1.77□□□□□ -2.13
IRC20YLR247C YEL076C-AP0CX16 216 aa1.77□□□□□ -2.13
IRC20YLR247C YLR464WP0CX17 216 aa1.77□□□□□ -2.13
IRC20YLR247C HNM1P19807 563 aa1.77□□□□□ -2.13
IRC20YLR247C CCA1P21269 546 aa1.77□□□□□ -2.13
IRC20YLR247C BMH1P29311 267 aaKnown RBP1.77□□□□□ -2.13
IRC20YLR247C SPR1P32603 445 aa1.77□□□□□ -2.13
IRC20YLR247C PMT1P33775 817 aa1.77□□□□□ -2.13
IRC20YLR247C CPR5P35176 225 aa1.77□□□□□ -2.13
IRC20YLR247C HES1P35843 434 aa1.77□□□□□ -2.13
IRC20YLR247C RFT1P38206 574 aaPredicted RBP1.77□□□□□ -2.13
IRC20YLR247C SEO1P39709 593 aa1.77□□□□□ -2.13
IRC20YLR247C YEL076CP39971 216 aa1.77□□□□□ -2.13
IRC20YLR247C THO1P40040 218 aaKnown RBP1.77□□□□□ -2.13
IRC20YLR247C FYV10P40492 516 aa1.77□□□□□ -2.13
IRC20YLR247C BNA6P43619 295 aa1.77□□□□□ -2.13
IRC20YLR247C RPA43P46669 326 aa1.77□□□□□ -2.13
IRC20YLR247C YGL117WP53133 265 aa1.77□□□□□ -2.13
IRC20YLR247C RRN9P53437 365 aa1.77□□□□□ -2.13
IRC20YLR247C ERG5P54781 538 aa1.77□□□□□ -2.13
IRC20YLR247C GPD1Q00055 391 aaKnown RBP1.77□□□□□ -2.13
IRC20YLR247C SSL2Q00578 843 aa1.77□□□□□ -2.13
IRC20YLR247C RPN4Q03465 531 aa1.77□□□□□ -2.13
IRC20YLR247C TMA23Q03525 211 aa1.77□□□□□ -2.13
IRC20YLR247C APC4Q04601 652 aa1.77□□□□□ -2.13
IRC20YLR247C PRM6Q04705 352 aa1.77□□□□□ -2.13
IRC20YLR247C GMC2Q06201 188 aa1.77□□□□□ -2.13
IRC20YLR247C CRN1Q06440 651 aa1.77□□□□□ -2.13
IRC20YLR247C SYT1Q06836 1226 aa1.77□□□□□ -2.13
IRC20YLR247C YNG1Q08465 219 aa1.77□□□□□ -2.13
IRC20YLR247C YPR053CQ6Q5F3 151 aa1.77□□□□□ -2.13
IRC20YLR247C COX2P00410 251 aa1.77□□□□□ -2.13
IRC20YLR247C TPI1P00942 248 aaKnown RBP1.77□□□□□ -2.13
IRC20YLR247C YPK1P12688 680 aaKnown RBP1.77□□□□□ -2.13
IRC20YLR247C KIN2P13186 1147 aaKnown RBP1.77□□□□□ -2.13
IRC20YLR247C EST1P17214 699 aaPredicted RBP1.77□□□□□ -2.13
IRC20YLR247C CDC42P19073 191 aa1.77□□□□□ -2.13
IRC20YLR247C PHO84P25297 587 aaKnown RBP1.77□□□□□ -2.13
IRC20YLR247C YIH1P25637 258 aa1.77□□□□□ -2.13
IRC20YLR247C GAC1P28006 793 aa1.77□□□□□ -2.13
IRC20YLR247C MRPL16P38064 232 aa1.77□□□□□ -2.13
Retrieved 100 of 5,963 RNA–protein pairs in 14.9 ms