RNA–Protein interactions for RNA: YLR087C

CSF1, Transcript of Protein required for fermentation at low temperature, yeastyeast

Gene CSF1, Length 8,877 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CSF1YLR087C TY1B-PR2P0C2J0 1756 aa2.27□□□□□ -2.05
CSF1YLR087C TY1B-PR3P0C2J1 1755 aaKnown RBP2.27□□□□□ -2.05
CSF1YLR087C TY1B-JR1P47098 1755 aa2.27□□□□□ -2.05
CSF1YLR087C TY1B-ML2Q03434 1755 aaKnown RBP2.27□□□□□ -2.05
CSF1YLR087C TY1B-ER1Q03612 1755 aa2.27□□□□□ -2.05
CSF1YLR087C TY1B-ML1Q04711 1755 aaKnown RBP2.27□□□□□ -2.05
CSF1YLR087C TY1B-GR2Q12269 1755 aa2.27□□□□□ -2.05
CSF1YLR087C TY1B-OLQ12273 1755 aa2.27□□□□□ -2.05
CSF1YLR087C TY1B-PLQ12414 1755 aaKnown RBP2.27□□□□□ -2.05
CSF1YLR087C MAG1P22134 296 aaKnown RBP2.27□□□□□ -2.05
CSF1YLR087C EHD3P28817 500 aa2.27□□□□□ -2.05
CSF1YLR087C LAS21P40367 830 aa2.27□□□□□ -2.05
CSF1YLR087C LOH1P47055 219 aa2.27□□□□□ -2.05
CSF1YLR087C EFM3P47163 339 aa2.27□□□□□ -2.05
CSF1YLR087C AIM14P53109 570 aa2.27□□□□□ -2.05
CSF1YLR087C FAR10Q06001 478 aa2.27□□□□□ -2.05
CSF1YLR087C ORT1Q12375 292 aa2.27□□□□□ -2.05
CSF1YLR087C YDL199CQ12407 687 aa2.27□□□□□ -2.05
CSF1YLR087C YLR412C-AQ3E742 68 aa2.27□□□□□ -2.05
CSF1YLR087C RPN13O13563 156 aa2.27□□□□□ -2.05
CSF1YLR087C SPE2P21182 396 aa2.27□□□□□ -2.05
CSF1YLR087C NFS1P25374 497 aa2.27□□□□□ -2.05
CSF1YLR087C CDC5P32562 705 aa2.27□□□□□ -2.05
CSF1YLR087C ICS2P38284 255 aa2.27□□□□□ -2.05
CSF1YLR087C PTC7P38797 343 aa2.27□□□□□ -2.05
CSF1YLR087C EPS1P40557 701 aa2.27□□□□□ -2.05
CSF1YLR087C SWP82P43554 623 aa2.27□□□□□ -2.05
CSF1YLR087C ALT2P52892 507 aa2.27□□□□□ -2.05
CSF1YLR087C GTR2P53290 341 aa2.27□□□□□ -2.05
CSF1YLR087C APP1P53933 587 aa2.27□□□□□ -2.05
CSF1YLR087C YDR366CP87287 132 aa2.27□□□□□ -2.05
CSF1YLR087C EBS1Q03466 884 aaKnown RBP2.27□□□□□ -2.05
CSF1YLR087C MED2Q12124 431 aa2.27□□□□□ -2.05
CSF1YLR087C FRE8Q12209 686 aa2.27□□□□□ -2.05
CSF1YLR087C ILV2P07342 687 aaKnown RBP2.27□□□□□ -2.05
CSF1YLR087C ADH4P10127 382 aa2.27□□□□□ -2.05
CSF1YLR087C PDX1P16451 410 aa2.27□□□□□ -2.05
CSF1YLR087C ADP1P25371 1049 aa2.27□□□□□ -2.05
CSF1YLR087C HXT1P32465 570 aa2.27□□□□□ -2.05
CSF1YLR087C GSP1P32835 219 aaKnown RBP2.27□□□□□ -2.05
CSF1YLR087C UGP1P32861 499 aaKnown RBP2.27□□□□□ -2.05
CSF1YLR087C YKL222CP35995 705 aa2.27□□□□□ -2.05
CSF1YLR087C SDS22P36047 338 aa2.27□□□□□ -2.05
CSF1YLR087C MRPL17P36528 281 aa2.27□□□□□ -2.05
CSF1YLR087C NTC20P38302 140 aaPredicted RBP2.27□□□□□ -2.05
CSF1YLR087C YPT35P38815 214 aaKnown RBP2.27□□□□□ -2.05
CSF1YLR087C YHR182WP38870 785 aa2.27□□□□□ -2.05
CSF1YLR087C GPI16P38875 610 aa2.27□□□□□ -2.05
CSF1YLR087C CDA2Q06703 312 aa2.27□□□□□ -2.05
CSF1YLR087C GCN4P03069 281 aa2.27□□□□□ -2.05
CSF1YLR087C RPS28BP0C0X0 67 aaKnown RBP2.27□□□□□ -2.05
CSF1YLR087C CDC42P19073 191 aa2.27□□□□□ -2.05
CSF1YLR087C SAR1P20606 190 aaKnown RBP2.27□□□□□ -2.05
CSF1YLR087C SRM1P21827 482 aa2.27□□□□□ -2.05
CSF1YLR087C COQ3P27680 312 aa2.27□□□□□ -2.05
CSF1YLR087C FAA1P30624 700 aaKnown RBP2.27□□□□□ -2.05
CSF1YLR087C IRE1P32361 1115 aa2.27□□□□□ -2.05
CSF1YLR087C FLR1P38124 548 aa2.27□□□□□ -2.05
CSF1YLR087C ECM8P38246 354 aa2.27□□□□□ -2.05
CSF1YLR087C ERP5P38819 212 aa2.27□□□□□ -2.05
CSF1YLR087C FAA3P39002 694 aa2.27□□□□□ -2.05
CSF1YLR087C PLB1P39105 664 aa2.27□□□□□ -2.05
CSF1YLR087C OAF1P39720 1047 aaPredicted RBP2.27□□□□□ -2.05
CSF1YLR087C COG3P40094 801 aa2.27□□□□□ -2.05
CSF1YLR087C YIA6P40556 373 aa2.27□□□□□ -2.05
CSF1YLR087C ACS2P52910 683 aaKnown RBP2.27□□□□□ -2.05
CSF1YLR087C RRP46P53256 223 aaPredicted RBP2.27□□□□□ -2.05
CSF1YLR087C RTT102P53330 157 aa2.27□□□□□ -2.05
CSF1YLR087C NOP13P53883 403 aaKnown RBP RIP-Chip data2.27□□□□□ -2.05not detected
CSF1YLR087C GPD1Q00055 391 aaKnown RBP2.27□□□□□ -2.05
CSF1YLR087C GCN5Q03330 439 aa2.27□□□□□ -2.05
CSF1YLR087C MSC2Q03455 724 aa2.27□□□□□ -2.05
CSF1YLR087C YMR265CQ03508 461 aaKnown RBP2.27□□□□□ -2.05
CSF1YLR087C LUC7Q07508 261 aaPredicted RBP2.27□□□□□ -2.05
CSF1YLR087C CMS1Q07897 291 aaKnown RBP2.27□□□□□ -2.05
CSF1YLR087C UPC2Q12151 913 aa2.27□□□□□ -2.05
CSF1YLR087C RPS28AQ3E7X9 67 aaPredicted RBP2.27□□□□□ -2.05
CSF1YLR087C TY1B-DR3Q99231 1755 aa2.27□□□□□ -2.05
CSF1YLR087C NSP1P14907 823 aaKnown RBP2.27□□□□□ -2.05
CSF1YLR087C CCA1P21269 546 aa2.27□□□□□ -2.05
CSF1YLR087C RNR3P21672 869 aaKnown RBP2.27□□□□□ -2.05
CSF1YLR087C VMA16P23968 213 aa2.27□□□□□ -2.05
CSF1YLR087C PBN1P25580 416 aa2.27□□□□□ -2.05
CSF1YLR087C NET1P47035 1189 aa2.27□□□□□ -2.05
CSF1YLR087C YGR127WP53275 312 aa2.27□□□□□ -2.05
CSF1YLR087C RNH70P53331 553 aa2.27□□□□□ -2.05
CSF1YLR087C BUD17P53727 317 aa2.27□□□□□ -2.05
CSF1YLR087C APS2Q00381 147 aa2.27□□□□□ -2.05
CSF1YLR087C SOG2Q08817 791 aa2.27□□□□□ -2.05
CSF1YLR087C YLR126CQ12288 251 aa2.27□□□□□ -2.05
CSF1YLR087C ERG11P10614 530 aa2.26□□□□□ -2.05
CSF1YLR087C NHP6BP11633 99 aaKnown RBP2.26□□□□□ -2.05
CSF1YLR087C NOP1P15646 327 aaKnown RBP2.26□□□□□ -2.05
CSF1YLR087C ATE1P16639 503 aa2.26□□□□□ -2.05
CSF1YLR087C SFL1P20134 766 aa2.26□□□□□ -2.05
CSF1YLR087C AMS1P22855 1083 aa2.26□□□□□ -2.05
CSF1YLR087C YKL102CP34249 101 aa2.26□□□□□ -2.05
CSF1YLR087C SMF2P38778 549 aa2.26□□□□□ -2.05
CSF1YLR087C UBP9P39967 754 aa2.26□□□□□ -2.05
CSF1YLR087C SLS1P42900 643 aa2.26□□□□□ -2.05
Retrieved 100 of 5,963 RNA–protein pairs in 19.3 ms