RNA–Protein interactions for RNA: YKL039W

PTM1, Transcript of Protein of unknown function, yeast

Gene PTM1, Length 1,572 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PTM1	YKL039W	KRE9	P39005	276 aa		4.16	□□□□□ -1.74
PTM1	YKL039W	TIF4631	P39935	952 aa	Known RBP	4.16	□□□□□ -1.74
PTM1	YKL039W	RPR2	P40571	144 aa		4.16	□□□□□ -1.74
PTM1	YKL039W	ALK1	P43633	760 aa	Known RBP	4.16	□□□□□ -1.74
PTM1	YKL039W	MDG1	P53885	366 aa		4.16	□□□□□ -1.74
PTM1	YKL039W	TOF2	Q02208	771 aa		4.16	□□□□□ -1.74
PTM1	YKL039W	RLI1	Q03195	608 aa	Known RBP	4.16	□□□□□ -1.74
PTM1	YKL039W	SLD5	Q03406	294 aa		4.16	□□□□□ -1.74
PTM1	YKL039W	FIN1	Q03898	291 aa		4.16	□□□□□ -1.74
PTM1	YKL039W	ERP1	Q05359	219 aa	Known RBP	4.16	□□□□□ -1.74
PTM1	YKL039W	SYO1	Q07395	620 aa		4.16	□□□□□ -1.74
PTM1	YKL039W	THP1	Q08231	455 aa		4.16	□□□□□ -1.74
PTM1	YKL039W	PPT2	Q12036	173 aa		4.16	□□□□□ -1.74
PTM1	YKL039W	GCN4	P03069	281 aa		4.15	□□□□□ -1.74
PTM1	YKL039W	MTF1	P14908	341 aa	Known RBP	4.15	□□□□□ -1.74
PTM1	YKL039W	PEP3	P27801	918 aa		4.15	□□□□□ -1.74
PTM1	YKL039W	PTR2	P32901	601 aa		4.15	□□□□□ -1.74
PTM1	YKL039W	WBP1	P33767	430 aa	Known RBP	4.15	□□□□□ -1.74
PTM1	YKL039W	SHP1	P34223	423 aa		4.15	□□□□□ -1.74
PTM1	YKL039W	MUM2	P38236	366 aa		4.15	□□□□□ -1.74
PTM1	YKL039W	YBR225W	P38321	900 aa		4.15	□□□□□ -1.74
PTM1	YKL039W	MSR1	P38714	643 aa		4.15	□□□□□ -1.74
PTM1	YKL039W	YIL089W	P40500	205 aa		4.15	□□□□□ -1.74
PTM1	YKL039W	YDL186W	P48568	277 aa		4.15	□□□□□ -1.74
PTM1	YKL039W	TAP42	Q04372	366 aa		4.15	□□□□□ -1.74
PTM1	YKL039W	IVY1	Q04934	453 aa		4.15	□□□□□ -1.74
PTM1	YKL039W	VPS38	Q05919	439 aa		4.15	□□□□□ -1.74
PTM1	YKL039W	RRI2	Q12348	645 aa		4.15	□□□□□ -1.74
PTM1	YKL039W	AVL9	Q12500	764 aa		4.15	□□□□□ -1.74
PTM1	YKL039W	AUS1	Q08409	1394 aa		4.15	□□□□□ -1.74
PTM1	YKL039W	GAL80	P04387	435 aa		4.14	□□□□□ -1.75
PTM1	YKL039W	DFR1	P07807	211 aa	Known RBP RIP-Chip data	4.14	□□□□□ -1.75	not detected
PTM1	YKL039W	LPD1	P09624	499 aa	Known RBP	4.14	□□□□□ -1.75
PTM1	YKL039W	BUD14	P27637	709 aa		4.14	□□□□□ -1.75
PTM1	YKL039W	SPC110	P32380	944 aa		4.14	□□□□□ -1.75
PTM1	YKL039W	MSN2	P33748	704 aa		4.14	□□□□□ -1.75
PTM1	YKL039W	TCM62	P38228	572 aa	Known RBP	4.14	□□□□□ -1.75
PTM1	YKL039W	RPH1	P39956	796 aa		4.14	□□□□□ -1.75
PTM1	YKL039W	TIM10	P87108	93 aa		4.14	□□□□□ -1.75
PTM1	YKL039W	DIB1	Q06819	143 aa	Predicted RBP	4.14	□□□□□ -1.75
PTM1	YKL039W	YDL009C	Q12210	107 aa		4.14	□□□□□ -1.75
PTM1	YKL039W	GRX6	Q12438	231 aa		4.14	□□□□□ -1.75
PTM1	YKL039W	SET6	Q12529	373 aa		4.14	□□□□□ -1.75
PTM1	YKL039W	CAR1	P00812	333 aa	Known RBP	4.14	□□□□□ -1.75
PTM1	YKL039W	PRP2	P20095	876 aa	Predicted RBP	4.14	□□□□□ -1.75
PTM1	YKL039W	ICL1	P28240	557 aa	Predicted RBP	4.14	□□□□□ -1.75
PTM1	YKL039W	BNA4	P38169	460 aa		4.14	□□□□□ -1.75
PTM1	YKL039W	COS10	P52924	374 aa		4.14	□□□□□ -1.75
PTM1	YKL039W	IMP4	P53941	290 aa	Known RBP	4.14	□□□□□ -1.75
PTM1	YKL039W	HEF3	P53978	1044 aa	Known RBP	4.14	□□□□□ -1.75
PTM1	YKL039W	YCR022C	P25620	114 aa		4.13	□□□□□ -1.75
PTM1	YKL039W	UTR4	P32626	227 aa		4.13	□□□□□ -1.75
PTM1	YKL039W	DUG2	P38149	878 aa		4.13	□□□□□ -1.75
PTM1	YKL039W	MTC4	P38335	694 aa	Known RBP	4.13	□□□□□ -1.75
PTM1	YKL039W	YEL057C	P39983	233 aa		4.13	□□□□□ -1.75
PTM1	YKL039W	YJL213W	P40896	331 aa		4.13	□□□□□ -1.75
PTM1	YKL039W	YFR016C	P43597	1233 aa	Known RBP	4.13	□□□□□ -1.75
PTM1	YKL039W	PET130	P47065	347 aa		4.13	□□□□□ -1.75
PTM1	YKL039W	MFB1	Q04922	465 aa		4.13	□□□□□ -1.75
PTM1	YKL039W	MRPL51	Q06090	140 aa	Predicted RBP	4.13	□□□□□ -1.75
PTM1	YKL039W	PHO92	Q06390	306 aa		4.13	□□□□□ -1.75
PTM1	YKL039W	MED1	Q12321	566 aa		4.13	□□□□□ -1.75
PTM1	YKL039W	MLP1	Q02455	1875 aa	Known RBP	4.12	□□□□□ -1.75
PTM1	YKL039W	GDH1	P07262	454 aa	Known RBP	4.12	□□□□□ -1.75
PTM1	YKL039W	AGA1	P32323	725 aa		4.12	□□□□□ -1.75
PTM1	YKL039W	YME1	P32795	747 aa		4.12	□□□□□ -1.75
PTM1	YKL039W	MET28	P40573	187 aa		4.12	□□□□□ -1.75
PTM1	YKL039W	RBG2	P53295	368 aa	Known RBP	4.12	□□□□□ -1.75
PTM1	YKL039W	RMT2	Q03305	412 aa		4.12	□□□□□ -1.75
PTM1	YKL039W	AYT1	Q12226	474 aa		4.12	□□□□□ -1.75
PTM1	YKL039W	COR1	P07256	457 aa		4.11	□□□□□ -1.75
PTM1	YKL039W	MCK1	P21965	375 aa	Known RBP	4.11	□□□□□ -1.75
PTM1	YKL039W	OCA4	P25366	362 aa		4.11	□□□□□ -1.75
PTM1	YKL039W	PAP1	P29468	568 aa	Known RBP	4.11	□□□□□ -1.75
PTM1	YKL039W	MRE11	P32829	692 aa		4.11	□□□□□ -1.75
PTM1	YKL039W	YHR218W	P38899	603 aa		4.11	□□□□□ -1.75
PTM1	YKL039W	CFT2	Q12102	859 aa	Predicted RBP	4.11	□□□□□ -1.75
PTM1	YKL039W	LSP1	Q12230	341 aa	Known RBP	4.11	□□□□□ -1.75
PTM1	YKL039W	PMD1	P32634	1753 aa		4.11	□□□□□ -1.75
PTM1	YKL039W	HEM2	P05373	342 aa		4.1	□□□□□ -1.75
PTM1	YKL039W	RPL20A	P0CX23	172 aa	Known RBP	4.1	□□□□□ -1.75
PTM1	YKL039W	RPL20B	P0CX24	172 aa	Predicted RBP	4.1	□□□□□ -1.75
PTM1	YKL039W	HSC82	P15108	705 aa	Known RBP	4.1	□□□□□ -1.75
PTM1	YKL039W	KEL1	P38853	1164 aa	Known RBP	4.1	□□□□□ -1.75
PTM1	YKL039W	SPO22	P40511	975 aa		4.1	□□□□□ -1.75
PTM1	YKL039W	BUD27	P43573	796 aa	Known RBP RIP-Chip data	4.1	□□□□□ -1.75	not detected
PTM1	YKL039W	GPI1	P53306	609 aa		4.1	□□□□□ -1.75
PTM1	YKL039W	RBS1	Q05672	457 aa	Known RBP	4.1	□□□□□ -1.75
PTM1	YKL039W	FAS2	P19097	1887 aa	Known RBP	4.1	□□□□□ -1.75
PTM1	YKL039W	CLC1	P17891	233 aa		4.1	□□□□□ -1.75
PTM1	YKL039W	MBB1	P39534	108 aa		4.1	□□□□□ -1.75
PTM1	YKL039W	RMD8	P43620	662 aa		4.1	□□□□□ -1.75
PTM1	YKL039W	CAF130	P53280	1122 aa	Predicted RBP	4.1	□□□□□ -1.75
PTM1	YKL039W	ZPR1	P53303	486 aa	Known RBP	4.1	□□□□□ -1.75
PTM1	YKL039W	SLG1	P54867	378 aa		4.1	□□□□□ -1.75
PTM1	YKL039W	SCW10	Q04951	389 aa		4.1	□□□□□ -1.75
PTM1	YKL039W	KEL3	Q08979	651 aa	Predicted RBP	4.1	□□□□□ -1.75
PTM1	YKL039W	HKR1	P41809	1802 aa		4.09	□□□□□ -1.75
PTM1	YKL039W	FOB1	O13329	566 aa		4.09	□□□□□ -1.75
PTM1	YKL039W	CPR3	P25719	182 aa		4.09	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 14.8 ms