RNA–Protein interactions for RNA: YKL028W

TFA1, Transcript of TFIIE large subunit, yeastyeast

Gene TFA1, Length 1,449 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TFA1YKL028W YLR173WQ06247 608 aa4.28□□□□□ -1.72
TFA1YKL028W ARR1Q06596 294 aa4.28□□□□□ -1.72
TFA1YKL028W CRT10Q08226 957 aa4.28□□□□□ -1.72
TFA1YKL028W YOL159CQ08300 171 aa4.28□□□□□ -1.72
TFA1YKL028W RKM1Q08961 583 aaPredicted RBP4.28□□□□□ -1.72
TFA1YKL028W PCL8Q08966 492 aa4.28□□□□□ -1.72
TFA1YKL028W RRD2Q12461 358 aa4.28□□□□□ -1.72
TFA1YKL028W YKL033W-AQ86ZR7 236 aa4.28□□□□□ -1.72
TFA1YKL028W Q0010Q9ZZX9 128 aa4.28□□□□□ -1.72
TFA1YKL028W RIP1P08067 215 aa4.27□□□□□ -1.73
TFA1YKL028W RSR1P13856 272 aa4.27□□□□□ -1.73
TFA1YKL028W ALG1P16661 449 aa4.27□□□□□ -1.73
TFA1YKL028W YCL068CP25593 260 aa4.27□□□□□ -1.73
TFA1YKL028W GAC1P28006 793 aa4.27□□□□□ -1.73
TFA1YKL028W VBA2P38358 474 aaKnown RBP4.27□□□□□ -1.73
TFA1YKL028W PCA1P38360 1216 aa4.27□□□□□ -1.73
TFA1YKL028W YHC3P47040 408 aa4.27□□□□□ -1.73
TFA1YKL028W CGR1P53188 120 aa4.27□□□□□ -1.73
TFA1YKL028W ERG26P53199 349 aaKnown RBP4.27□□□□□ -1.73
TFA1YKL028W RTT102P53330 157 aa4.27□□□□□ -1.73
TFA1YKL028W DIP5P53388 608 aa4.27□□□□□ -1.73
TFA1YKL028W SLG1P54867 378 aa4.27□□□□□ -1.73
TFA1YKL028W DLT1Q04216 342 aa4.27□□□□□ -1.73
TFA1YKL028W UFO1Q04511 668 aa4.27□□□□□ -1.73
TFA1YKL028W YML053CQ04978 212 aa4.27□□□□□ -1.73
TFA1YKL028W BCP1Q06338 283 aa4.27□□□□□ -1.73
TFA1YKL028W MDM36Q06820 579 aa4.27□□□□□ -1.73
TFA1YKL028W MED4Q12343 284 aa4.27□□□□□ -1.73
TFA1YKL028W COX3P00420 269 aa4.26□□□□□ -1.73
TFA1YKL028W PET111P08468 800 aa4.26□□□□□ -1.73
TFA1YKL028W MET3P08536 511 aa4.26□□□□□ -1.73
TFA1YKL028W YMR085WP0CF18 432 aa4.26□□□□□ -1.73
TFA1YKL028W KRS1P15180 591 aaKnown RBP4.26□□□□□ -1.73
TFA1YKL028W CDC42P19073 191 aa4.26□□□□□ -1.73
TFA1YKL028W SEC62P21825 274 aa4.26□□□□□ -1.73
TFA1YKL028W BEM1P29366 551 aa4.26□□□□□ -1.73
TFA1YKL028W EFB1P32471 206 aaKnown RBP4.26□□□□□ -1.73
TFA1YKL028W ADE17P38009 592 aaKnown RBP4.26□□□□□ -1.73
TFA1YKL028W OLA1P38219 394 aaKnown RBP4.26□□□□□ -1.73
TFA1YKL028W SWC5P38326 303 aa4.26□□□□□ -1.73
TFA1YKL028W TCD1P38756 429 aa4.26□□□□□ -1.73
TFA1YKL028W MNL1P38888 796 aa4.26□□□□□ -1.73
TFA1YKL028W SCC4P40090 624 aa4.26□□□□□ -1.73
TFA1YKL028W YGL185CP53100 379 aa4.26□□□□□ -1.73
TFA1YKL028W YGR151CP53287 111 aa4.26□□□□□ -1.73
TFA1YKL028W RRG8Q06109 277 aa4.26□□□□□ -1.73
TFA1YKL028W SMD2Q06217 110 aaKnown RBP4.26□□□□□ -1.73
TFA1YKL028W VAC14Q06708 880 aa4.26□□□□□ -1.73
TFA1YKL028W POS5Q06892 414 aa4.26□□□□□ -1.73
TFA1YKL028W TSR1Q07381 788 aaKnown RBP4.26□□□□□ -1.73
TFA1YKL028W ENB1Q08299 606 aa4.26□□□□□ -1.73
TFA1YKL028W IRC13Q08630 104 aa4.26□□□□□ -1.73
TFA1YKL028W RKI1Q12189 258 aa4.26□□□□□ -1.73
TFA1YKL028W BUG1Q12191 341 aa4.26□□□□□ -1.73
TFA1YKL028W TRM13Q12383 476 aa4.26□□□□□ -1.73
TFA1YKL028W ERG11P10614 530 aa4.25□□□□□ -1.73
TFA1YKL028W MSS116P15424 664 aaKnown RBP4.25□□□□□ -1.73
TFA1YKL028W SGV1P23293 657 aaKnown RBP4.25□□□□□ -1.73
TFA1YKL028W ASF2P32448 525 aaPredicted RBP4.25□□□□□ -1.73
TFA1YKL028W GDA1P32621 518 aa4.25□□□□□ -1.73
TFA1YKL028W PTK1P36002 662 aaPredicted RBP4.25□□□□□ -1.73
TFA1YKL028W RPC37P36121 282 aa4.25□□□□□ -1.73
TFA1YKL028W VHC1P38329 1120 aa4.25□□□□□ -1.73
TFA1YKL028W MBB1P39534 108 aa4.25□□□□□ -1.73
TFA1YKL028W YJL070CP40361 888 aa4.25□□□□□ -1.73
TFA1YKL028W RIB4P50861 169 aaPredicted RBP4.25□□□□□ -1.73
TFA1YKL028W ROG1P53118 685 aa4.25□□□□□ -1.73
TFA1YKL028W COG2P53271 262 aa4.25□□□□□ -1.73
TFA1YKL028W DBP6P53734 629 aaKnown RBP4.25□□□□□ -1.73
TFA1YKL028W YMR102CQ03177 834 aa4.25□□□□□ -1.73
TFA1YKL028W CAB5Q03941 241 aa4.25□□□□□ -1.73
TFA1YKL028W YPR078CQ06813 372 aa4.25□□□□□ -1.73
TFA1YKL028W YLL007CQ07799 665 aa4.25□□□□□ -1.73
TFA1YKL028W YOR012WQ12351 137 aa4.25□□□□□ -1.73
TFA1YKL028W COR1P07256 457 aa4.24□□□□□ -1.73
TFA1YKL028W TRP4P07285 380 aaPredicted RBP4.24□□□□□ -1.73
TFA1YKL028W GPA1P08539 472 aa4.24□□□□□ -1.73
TFA1YKL028W PRB1P09232 635 aa4.24□□□□□ -1.73
TFA1YKL028W THR4P16120 514 aaKnown RBP4.24□□□□□ -1.73
TFA1YKL028W STE4P18851 423 aa4.24□□□□□ -1.73
TFA1YKL028W MEK1P24719 497 aaPredicted RBP4.24□□□□□ -1.73
TFA1YKL028W PSO2P30620 661 aa4.24□□□□□ -1.73
TFA1YKL028W SIN4P32259 974 aa4.24□□□□□ -1.73
TFA1YKL028W KRE6P32486 720 aa4.24□□□□□ -1.73
TFA1YKL028W ECM25P32525 599 aa4.24□□□□□ -1.73
TFA1YKL028W CBF5P33322 483 aaKnown RBP RIP-Chip data4.24□□□□□ -1.73not detected
TFA1YKL028W HIS7P33734 552 aaKnown RBP4.24□□□□□ -1.73
TFA1YKL028W APL3P38065 1025 aa4.24□□□□□ -1.73
TFA1YKL028W ERG7P38604 731 aa4.24□□□□□ -1.73
TFA1YKL028W DBP8P38719 431 aa4.24□□□□□ -1.73
TFA1YKL028W GPI16P38875 610 aa4.24□□□□□ -1.73
TFA1YKL028W STN1P38960 494 aa4.24□□□□□ -1.73
TFA1YKL028W SAP1P39955 897 aaKnown RBP4.24□□□□□ -1.73
TFA1YKL028W FMP52P40008 231 aa4.24□□□□□ -1.73
TFA1YKL028W PIB2P53191 635 aa4.24□□□□□ -1.73
TFA1YKL028W VOA1P53262 265 aa4.24□□□□□ -1.73
TFA1YKL028W HEF3P53978 1044 aaKnown RBP4.24□□□□□ -1.73
TFA1YKL028W EMI2Q04409 500 aaKnown RBP4.24□□□□□ -1.73
TFA1YKL028W APC4Q04601 652 aa4.24□□□□□ -1.73
TFA1YKL028W AIM39Q08223 395 aa4.24□□□□□ -1.73
Retrieved 100 of 5,963 RNA–protein pairs in 45.8 ms