RNA–Protein interactions for RNA: YIL040W

APQ12, Transcript of Protein required for nuclear envelope morphology, yeast

Gene APQ12, Length 417 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
APQ12	YIL040W	DTR1	P38125	572 aa		0.82	□□□□□ -2.28
APQ12	YIL040W	MST28	P39552	234 aa		0.82	□□□□□ -2.28
APQ12	YIL040W	URB2	P47108	1174 aa		0.82	□□□□□ -2.28
APQ12	YIL040W	HEF3	P53978	1044 aa	Known RBP	0.82	□□□□□ -2.28
APQ12	YIL040W	TOF2	Q02208	771 aa		0.82	□□□□□ -2.28
APQ12	YIL040W	PNG1	Q02890	363 aa		0.82	□□□□□ -2.28
APQ12	YIL040W	PDS5	Q04264	1277 aa		0.82	□□□□□ -2.28
APQ12	YIL040W	YPR195C	Q06594	109 aa		0.82	□□□□□ -2.28
APQ12	YIL040W	VIP1	Q06685	1146 aa	Known RBP	0.82	□□□□□ -2.28
APQ12	YIL040W	COX4	P04037	155 aa		0.81	□□□□□ -2.28
APQ12	YIL040W	ATP4	P05626	244 aa		0.81	□□□□□ -2.28
APQ12	YIL040W	LEU4	P06208	619 aa	Known RBP	0.81	□□□□□ -2.28
APQ12	YIL040W	CBP6	P07253	162 aa	Predicted RBP	0.81	□□□□□ -2.28
APQ12	YIL040W	ARD1	P07347	238 aa	Predicted RBP	0.81	□□□□□ -2.28
APQ12	YIL040W	HSC82	P15108	705 aa	Known RBP	0.81	□□□□□ -2.28
APQ12	YIL040W	SMY1	P32364	656 aa	Known RBP	0.81	□□□□□ -2.28
APQ12	YIL040W	DPH2	P32461	534 aa		0.81	□□□□□ -2.28
APQ12	YIL040W	KAR9	P32526	644 aa		0.81	□□□□□ -2.28
APQ12	YIL040W	AFG3	P39925	761 aa		0.81	□□□□□ -2.28
APQ12	YIL040W	SEC9	P40357	651 aa		0.81	□□□□□ -2.28
APQ12	YIL040W	YPS6	P40583	537 aa		0.81	□□□□□ -2.28
APQ12	YIL040W	LYS4	P49367	693 aa	Predicted RBP	0.81	□□□□□ -2.28
APQ12	YIL040W	YGR018C	P53211	109 aa		0.81	□□□□□ -2.28
APQ12	YIL040W	LUC7	Q07508	261 aa	Predicted RBP	0.81	□□□□□ -2.28
APQ12	YIL040W	YPL272C	Q08984	517 aa		0.81	□□□□□ -2.28
APQ12	YIL040W	PLP2	Q12017	286 aa		0.81	□□□□□ -2.28
APQ12	YIL040W	IZH2	Q12442	317 aa		0.81	□□□□□ -2.28
APQ12	YIL040W	RAX2	Q12465	1220 aa		0.81	□□□□□ -2.28
APQ12	YIL040W	ADH1	P00330	348 aa	Known RBP	0.8	□□□□□ -2.28
APQ12	YIL040W	ART10	P18634	518 aa	Known RBP	0.8	□□□□□ -2.28
APQ12	YIL040W	SNT1	P25357	1226 aa		0.8	□□□□□ -2.28
APQ12	YIL040W	YIH1	P25637	258 aa		0.8	□□□□□ -2.28
APQ12	YIL040W	PAP1	P29468	568 aa	Known RBP	0.8	□□□□□ -2.28
APQ12	YIL040W	RTC2	P38279	296 aa		0.8	□□□□□ -2.28
APQ12	YIL040W	YER184C	P39961	794 aa		0.8	□□□□□ -2.28
APQ12	YIL040W	POP1	P41812	875 aa		0.8	□□□□□ -2.28
APQ12	YIL040W	AIM22	P47051	409 aa		0.8	□□□□□ -2.28
APQ12	YIL040W	YMR181C	Q03231	154 aa		0.8	□□□□□ -2.28
APQ12	YIL040W	BUD22	Q04347	519 aa	Known RBP	0.8	□□□□□ -2.28
APQ12	YIL040W	COQ9	Q05779	260 aa		0.8	□□□□□ -2.28
APQ12	YIL040W	VID22	Q05934	901 aa		0.8	□□□□□ -2.28
APQ12	YIL040W	MRD1	Q06106	887 aa	Known RBP	0.8	□□□□□ -2.28
APQ12	YIL040W	NDE2	Q07500	545 aa		0.8	□□□□□ -2.28
APQ12	YIL040W	DNL4	Q08387	944 aa	Predicted RBP	0.8	□□□□□ -2.28
APQ12	YIL040W	CTI6	Q08923	506 aa		0.8	□□□□□ -2.28
APQ12	YIL040W	FMP40	Q08968	688 aa	Predicted RBP	0.8	□□□□□ -2.28
APQ12	YIL040W	TRM8	Q12009	286 aa		0.8	□□□□□ -2.28
APQ12	YIL040W	TY1B-A	O13527	1196 aa	Known RBP	0.79	□□□□□ -2.28
APQ12	YIL040W	NAM2	P11325	894 aa		0.79	□□□□□ -2.28
APQ12	YIL040W	ATP11	P32453	318 aa		0.79	□□□□□ -2.28
APQ12	YIL040W	MAL33	P38157	468 aa		0.79	□□□□□ -2.28
APQ12	YIL040W	YFL012W	P43580	148 aa		0.79	□□□□□ -2.28
APQ12	YIL040W	DLD2	P46681	530 aa	Known RBP	0.79	□□□□□ -2.28
APQ12	YIL040W	TRS85	P46944	698 aa		0.79	□□□□□ -2.28
APQ12	YIL040W	MCH1	Q07376	486 aa		0.79	□□□□□ -2.28
APQ12	YIL040W	SGS1	P35187	1447 aa		0.79	□□□□□ -2.28
APQ12	YIL040W	CYC3	P06182	269 aa		0.78	□□□□□ -2.28
APQ12	YIL040W	SNF1	P06782	633 aa	Known RBP	0.78	□□□□□ -2.28
APQ12	YIL040W	EST1	P17214	699 aa	Predicted RBP	0.78	□□□□□ -2.28
APQ12	YIL040W	PRP2	P20095	876 aa	Predicted RBP	0.78	□□□□□ -2.28
APQ12	YIL040W	OLE1	P21147	510 aa	Known RBP	0.78	□□□□□ -2.28
APQ12	YIL040W	RPI1	P23250	407 aa	Known RBP	0.78	□□□□□ -2.28
APQ12	YIL040W	AAT2	P23542	418 aa	Known RBP	0.78	□□□□□ -2.28
APQ12	YIL040W	PRE8	P23639	250 aa		0.78	□□□□□ -2.28
APQ12	YIL040W	TIP1	P27654	210 aa	Predicted RBP	0.78	□□□□□ -2.28
APQ12	YIL040W	MUD1	P32605	298 aa	Known RBP	0.78	□□□□□ -2.28
APQ12	YIL040W	YME2	P32843	850 aa		0.78	□□□□□ -2.28
APQ12	YIL040W	PTK1	P36002	662 aa	Predicted RBP	0.78	□□□□□ -2.28
APQ12	YIL040W	AUR1	P36107	401 aa	Predicted RBP	0.78	□□□□□ -2.28
APQ12	YIL040W	REG2	P38232	338 aa		0.78	□□□□□ -2.28
APQ12	YIL040W	ERP2	P39704	215 aa		0.78	□□□□□ -2.28
APQ12	YIL040W	ARC1	P46672	376 aa	Known RBP	0.78	□□□□□ -2.28
APQ12	YIL040W	BNA1	P47096	177 aa		0.78	□□□□□ -2.28
APQ12	YIL040W	SOV1	Q04748	898 aa		0.78	□□□□□ -2.28
APQ12	YIL040W	SNX3	Q08826	162 aa	Known RBP	0.78	□□□□□ -2.28
APQ12	YIL040W	PKH2	Q12236	1081 aa	Known RBP	0.78	□□□□□ -2.28
APQ12	YIL040W	AHC1	Q12433	566 aa		0.78	□□□□□ -2.28
APQ12	YIL040W	YOL087C	Q99247	1116 aa		0.78	□□□□□ -2.28
APQ12	YIL040W	RAV1	P47104	1357 aa		0.78	□□□□□ -2.28
APQ12	YIL040W	COR1	P07256	457 aa		0.77	□□□□□ -2.29
APQ12	YIL040W	MRP13	P12686	339 aa		0.77	□□□□□ -2.29
APQ12	YIL040W	SLY1	P22213	666 aa		0.77	□□□□□ -2.29
APQ12	YIL040W	ELO2	P25358	347 aa		0.77	□□□□□ -2.29
APQ12	YIL040W	TPS2	P31688	896 aa	Known RBP	0.77	□□□□□ -2.29
APQ12	YIL040W	YCR041W	P37265	110 aa		0.77	□□□□□ -2.29
APQ12	YIL040W	CBP4	P37267	147 aa		0.77	□□□□□ -2.29
APQ12	YIL040W	YBR137W	P38276	179 aa		0.77	□□□□□ -2.29
APQ12	YIL040W	YER010C	P40011	234 aa		0.77	□□□□□ -2.29
APQ12	YIL040W	SYG1	P40528	902 aa		0.77	□□□□□ -2.29
APQ12	YIL040W	SIP4	P46954	829 aa		0.77	□□□□□ -2.29
APQ12	YIL040W	YPS5	P53057	165 aa		0.77	□□□□□ -2.29
APQ12	YIL040W	YIP5	P53108	310 aa		0.77	□□□□□ -2.29
APQ12	YIL040W	YML037C	Q03703	340 aa		0.77	□□□□□ -2.29
APQ12	YIL040W	SNO4	Q04902	237 aa		0.77	□□□□□ -2.29
APQ12	YIL040W	TIM18	Q08749	192 aa		0.77	□□□□□ -2.29
APQ12	YIL040W	HSP33	Q08914	237 aa	Known RBP	0.77	□□□□□ -2.29
APQ12	YIL040W	HSP32	Q08992	237 aa		0.77	□□□□□ -2.29
APQ12	YIL040W	SLF1	Q12034	447 aa	Known RBP	0.77	□□□□□ -2.29
APQ12	YIL040W	JID1	Q12350	301 aa		0.77	□□□□□ -2.29
APQ12	YIL040W	TOP1	P04786	769 aa		0.76	□□□□□ -2.29

Retrieved 100 of 5,963 RNA–protein pairs in 21.6 ms