RNA–Protein interactions for RNA: YGL248W

PDE1, Transcript of Low-affinity cyclic AMP phosphodiesterase, yeastyeast

Gene PDE1, Length 1,110 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PDE1YGL248W DSN1P40568 576 aa5.19□□□□□ -1.58
PDE1YGL248W MAF1P41910 395 aa5.19□□□□□ -1.58
PDE1YGL248W HIT1P46973 164 aa5.19□□□□□ -1.58
PDE1YGL248W IBA57P47158 497 aa5.19□□□□□ -1.58
PDE1YGL248W RIB4P50861 169 aaPredicted RBP5.19□□□□□ -1.58
PDE1YGL248W MTC3P53077 123 aa5.19□□□□□ -1.58
PDE1YGL248W STR3P53101 465 aaKnown RBP5.19□□□□□ -1.58
PDE1YGL248W MRS2Q01926 470 aa5.19□□□□□ -1.58
PDE1YGL248W YKR011CQ02209 353 aa5.19□□□□□ -1.58
PDE1YGL248W WAR1Q03631 944 aa5.19□□□□□ -1.58
PDE1YGL248W ENT5Q03769 411 aaKnown RBP5.19□□□□□ -1.58
PDE1YGL248W FIN1Q03898 291 aa5.19□□□□□ -1.58
PDE1YGL248W CTS2Q06350 511 aa5.19□□□□□ -1.58
PDE1YGL248W RTT109Q07794 436 aa5.19□□□□□ -1.58
PDE1YGL248W SEY1Q99287 776 aa5.19□□□□□ -1.58
PDE1YGL248W TUS1Q06412 1307 aa5.19□□□□□ -1.58
PDE1YGL248W PMA1P05030 918 aaKnown RBP5.18□□□□□ -1.58
PDE1YGL248W CDC21P06785 304 aa5.18□□□□□ -1.58
PDE1YGL248W SNF5P18480 905 aa5.18□□□□□ -1.58
PDE1YGL248W RPL24BP24000 155 aaKnown RBP5.18□□□□□ -1.58
PDE1YGL248W CWP1P28319 239 aa5.18□□□□□ -1.58
PDE1YGL248W PSO2P30620 661 aa5.18□□□□□ -1.58
PDE1YGL248W YSC84P32793 468 aa5.18□□□□□ -1.58
PDE1YGL248W ZTA1P38230 334 aaKnown RBP5.18□□□□□ -1.58
PDE1YGL248W GIM4P40005 111 aaKnown RBP5.18□□□□□ -1.58
PDE1YGL248W THO1P40040 218 aaKnown RBP5.18□□□□□ -1.58
PDE1YGL248W PIG2P40187 538 aa5.18□□□□□ -1.58
PDE1YGL248W ATM1P40416 690 aa5.18□□□□□ -1.58
PDE1YGL248W NDC80P40460 691 aa5.18□□□□□ -1.58
PDE1YGL248W YIL001WP40560 513 aa5.18□□□□□ -1.58
PDE1YGL248W LSM1P47017 172 aaKnown RBP5.18□□□□□ -1.58
PDE1YGL248W YIP5P53108 310 aa5.18□□□□□ -1.58
PDE1YGL248W YNL260CP53846 198 aa5.18□□□□□ -1.58
PDE1YGL248W PRM15Q03262 622 aa5.18□□□□□ -1.58
PDE1YGL248W HMO1Q03973 246 aaKnown RBP5.18□□□□□ -1.58
PDE1YGL248W THI7Q05998 598 aa5.18□□□□□ -1.58
PDE1YGL248W YPL272CQ08984 517 aa5.18□□□□□ -1.58
PDE1YGL248W ATG31Q12421 196 aa5.18□□□□□ -1.58
PDE1YGL248W RAD9P14737 1309 aa5.18□□□□□ -1.58
PDE1YGL248W LEU4P06208 619 aaKnown RBP5.17□□□□□ -1.58
PDE1YGL248W ARD1P07347 238 aaPredicted RBP5.17□□□□□ -1.58
PDE1YGL248W MATALPHA2P0CY08 210 aa5.17□□□□□ -1.58
PDE1YGL248W HMLALPHA2P0CY09 210 aa5.17□□□□□ -1.58
PDE1YGL248W WHI2P12611 486 aa5.17□□□□□ -1.58
PDE1YGL248W FRS1P15624 595 aaKnown RBP5.17□□□□□ -1.58
PDE1YGL248W IME1P21190 360 aa5.17□□□□□ -1.58
PDE1YGL248W DAL2P25335 343 aa5.17□□□□□ -1.58
PDE1YGL248W PRP45P28004 379 aaPredicted RBP5.17□□□□□ -1.58
PDE1YGL248W SKG6P32900 734 aaPredicted RBP5.17□□□□□ -1.58
PDE1YGL248W HRB1P38922 454 aaKnown RBP RIP-Chip data5.17□□□□□ -1.58not detected
PDE1YGL248W IRC8P47046 822 aa5.17□□□□□ -1.58
PDE1YGL248W ASN2P49090 572 aaKnown RBP5.17□□□□□ -1.58
PDE1YGL248W DIA3P52290 468 aa5.17□□□□□ -1.58
PDE1YGL248W MRP51Q02950 344 aa5.17□□□□□ -1.58
PDE1YGL248W MTG1Q03151 367 aaPredicted RBP5.17□□□□□ -1.58
PDE1YGL248W YDR222WQ04925 415 aa5.17□□□□□ -1.58
PDE1YGL248W YDL144CQ07589 356 aa5.17□□□□□ -1.58
PDE1YGL248W SHS1Q07657 551 aa5.17□□□□□ -1.58
PDE1YGL248W SDO1Q07953 250 aaKnown RBP5.17□□□□□ -1.58
PDE1YGL248W YOL075CQ08234 1294 aa5.17□□□□□ -1.58
PDE1YGL248W COQ4O13525 335 aa5.16□□□□□ -1.58
PDE1YGL248W PAB1P04147 577 aaKnown RBP RIP-Chip data5.16□□□□□ -1.58 RIP-Chip
PDE1YGL248W RAD3P06839 778 aa5.16□□□□□ -1.58
PDE1YGL248W KRS1P15180 591 aaKnown RBP5.16□□□□□ -1.58
PDE1YGL248W YAP1P19880 650 aaKnown RBP5.16□□□□□ -1.58
PDE1YGL248W PPH22P23595 377 aa5.16□□□□□ -1.58
PDE1YGL248W RHB1P25378 209 aa5.16□□□□□ -1.58
PDE1YGL248W KRE2P27809 442 aa5.16□□□□□ -1.58
PDE1YGL248W CIN8P27895 1000 aa5.16□□□□□ -1.58
PDE1YGL248W MTC7P32633 139 aa5.16□□□□□ -1.58
PDE1YGL248W NUF2P33895 451 aa5.16□□□□□ -1.58
PDE1YGL248W RPC25P35718 212 aa5.16□□□□□ -1.58
PDE1YGL248W PPS1P38148 807 aa5.16□□□□□ -1.58
PDE1YGL248W CBR1P38626 284 aaKnown RBP5.16□□□□□ -1.58
PDE1YGL248W YNG2P38806 282 aaKnown RBP5.16□□□□□ -1.58
PDE1YGL248W BIT61P47041 543 aa5.16□□□□□ -1.58
PDE1YGL248W SNX4P47057 423 aa5.16□□□□□ -1.58
PDE1YGL248W YGL036WP53185 909 aaPredicted RBP5.16□□□□□ -1.58
PDE1YGL248W SLI1P53304 468 aa5.16□□□□□ -1.58
PDE1YGL248W MRPL50P53724 139 aa5.16□□□□□ -1.58
PDE1YGL248W MFM1Q02783 413 aa5.16□□□□□ -1.58
PDE1YGL248W EKI1Q03764 534 aa5.16□□□□□ -1.58
PDE1YGL248W MYO5Q04439 1219 aaKnown RBP5.16□□□□□ -1.58
PDE1YGL248W PIG1Q06216 648 aa5.16□□□□□ -1.58
PDE1YGL248W RXT3Q07458 294 aa5.16□□□□□ -1.58
PDE1YGL248W YRA1Q12159 226 aaKnown RBP5.16□□□□□ -1.58
PDE1YGL248W TIP41Q12199 356 aa5.16□□□□□ -1.58
PDE1YGL248W OSW2Q12202 724 aa5.16□□□□□ -1.58
PDE1YGL248W INP53Q12271 1107 aa5.16□□□□□ -1.58
PDE1YGL248W AI5_BETAQ9ZZX0 354 aa5.16□□□□□ -1.58
PDE1YGL248W CAR1P00812 333 aaKnown RBP5.15□□□□□ -1.59
PDE1YGL248W RPL35AP0CX84 120 aaKnown RBP5.15□□□□□ -1.59
PDE1YGL248W RPL35BP0CX85 120 aaKnown RBP5.15□□□□□ -1.59
PDE1YGL248W SNF6P18888 332 aa5.15□□□□□ -1.59
PDE1YGL248W VPS33P20795 691 aa5.15□□□□□ -1.59
PDE1YGL248W PRE10P21242 288 aaKnown RBP RIP-Chip data5.15□□□□□ -1.59not detected
PDE1YGL248W VMA16P23968 213 aa5.15□□□□□ -1.59
PDE1YGL248W RBK1P25332 333 aa5.15□□□□□ -1.59
PDE1YGL248W YUR1P26725 428 aa5.15□□□□□ -1.59
PDE1YGL248W PMI40P29952 429 aaKnown RBP5.15□□□□□ -1.59
Retrieved 100 of 5,963 RNA–protein pairs in 33.5 ms