RNA–Protein interactions for RNA: YFR050C

PRE4, Transcript of Beta 7 subunit of the 20S proteasome, yeastyeast

Gene PRE4, Length 801 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRE4YFR050C PFA4Q12006 378 aa2.17□□□□□ -2.06
PRE4YFR050C YBR255C-AQ3E776 120 aa2.17□□□□□ -2.06
PRE4YFR050C Q0010Q9ZZX9 128 aa2.17□□□□□ -2.06
PRE4YFR050C COX1P00401 534 aa2.16□□□□□ -2.06
PRE4YFR050C MIS1P09440 975 aaKnown RBP2.16□□□□□ -2.06
PRE4YFR050C PET122P10355 254 aa2.16□□□□□ -2.06
PRE4YFR050C MAK32P23060 363 aa2.16□□□□□ -2.06
PRE4YFR050C MSH1P25846 959 aa2.16□□□□□ -2.06
PRE4YFR050C MSP1P28737 362 aa2.16□□□□□ -2.06
PRE4YFR050C HIR2P32480 875 aa2.16□□□□□ -2.06
PRE4YFR050C COT1P32798 439 aa2.16□□□□□ -2.06
PRE4YFR050C SHE3P38272 425 aaKnown RBP2.16□□□□□ -2.06
PRE4YFR050C ICS2P38284 255 aa2.16□□□□□ -2.06
PRE4YFR050C FAD1P38913 306 aa2.16□□□□□ -2.06
PRE4YFR050C HIS6P40545 261 aa2.16□□□□□ -2.06
PRE4YFR050C TRM9P49957 279 aa2.16□□□□□ -2.06
PRE4YFR050C RPN14P53196 417 aa2.16□□□□□ -2.06
PRE4YFR050C IBD2P53892 351 aa2.16□□□□□ -2.06
PRE4YFR050C AIM33Q04516 312 aa2.16□□□□□ -2.06
PRE4YFR050C YDR109CQ04585 715 aa2.16□□□□□ -2.06
PRE4YFR050C OPY2Q06810 360 aa2.16□□□□□ -2.06
PRE4YFR050C ILV1P00927 576 aaKnown RBP2.15□□□□□ -2.07
PRE4YFR050C INH1P01097 85 aa2.15□□□□□ -2.07
PRE4YFR050C GAL1P04385 528 aa2.15□□□□□ -2.07
PRE4YFR050C SUI3P09064 285 aaKnown RBP2.15□□□□□ -2.07
PRE4YFR050C PHO81P17442 1178 aa2.15□□□□□ -2.07
PRE4YFR050C SNT1P25357 1226 aa2.15□□□□□ -2.07
PRE4YFR050C PTP2P29461 750 aa2.15□□□□□ -2.07
PRE4YFR050C GSH1P32477 678 aa2.15□□□□□ -2.07
PRE4YFR050C CDC13P32797 924 aaKnown RBP2.15□□□□□ -2.07
PRE4YFR050C ECM13P38195 257 aa2.15□□□□□ -2.07
PRE4YFR050C QRI7P43122 407 aa2.15□□□□□ -2.07
PRE4YFR050C GUF1P46943 645 aa2.15□□□□□ -2.07
PRE4YFR050C YGL242CP53066 181 aa2.15□□□□□ -2.07
PRE4YFR050C NOP13P53883 403 aaKnown RBP RIP-Chip data2.15□□□□□ -2.07not detected
PRE4YFR050C TIM10P87108 93 aa2.15□□□□□ -2.07
PRE4YFR050C VTC3Q02725 835 aa2.15□□□□□ -2.07
PRE4YFR050C PSR2Q07949 397 aa2.15□□□□□ -2.07
PRE4YFR050C AKR2Q12013 749 aa2.15□□□□□ -2.07
PRE4YFR050C RRI1Q12468 440 aa2.15□□□□□ -2.07
PRE4YFR050C HOM3P10869 527 aa2.14□□□□□ -2.07
PRE4YFR050C SWI4P25302 1093 aaKnown RBP2.14□□□□□ -2.07
PRE4YFR050C YNG2P38806 282 aaKnown RBP2.14□□□□□ -2.07
PRE4YFR050C EPL1P43572 832 aa2.14□□□□□ -2.07
PRE4YFR050C MDV1P47025 714 aa2.14□□□□□ -2.07
PRE4YFR050C YPT11P48559 417 aa2.14□□□□□ -2.07
PRE4YFR050C OCA1P50946 238 aaPredicted RBP2.14□□□□□ -2.07
PRE4YFR050C YRB30P53107 440 aaPredicted RBP2.14□□□□□ -2.07
PRE4YFR050C SGF73P53165 657 aa2.14□□□□□ -2.07
PRE4YFR050C MKC7P53379 596 aa2.14□□□□□ -2.07
PRE4YFR050C YPL068CQ02749 293 aa2.14□□□□□ -2.07
PRE4YFR050C MTG1Q03151 367 aaPredicted RBP2.14□□□□□ -2.07
PRE4YFR050C YDR209CQ03480 137 aa2.14□□□□□ -2.07
PRE4YFR050C CSI1Q04368 295 aa2.14□□□□□ -2.07
PRE4YFR050C ARP9Q05123 467 aa2.14□□□□□ -2.07
PRE4YFR050C PUF2Q12221 1075 aaKnown RBP RIP-Chip data2.14□□□□□ -2.07not detected
PRE4YFR050C GEP5Q12393 293 aa2.14□□□□□ -2.07
PRE4YFR050C ATP4P05626 244 aa2.13□□□□□ -2.07
PRE4YFR050C CNA1P23287 553 aa2.13□□□□□ -2.07
PRE4YFR050C ELO2P25358 347 aa2.13□□□□□ -2.07
PRE4YFR050C RPB9P27999 122 aa2.13□□□□□ -2.07
PRE4YFR050C ARP2P32381 391 aaKnown RBP2.13□□□□□ -2.07
PRE4YFR050C XRS2P33301 854 aa2.13□□□□□ -2.07
PRE4YFR050C NUP120P35729 1037 aa2.13□□□□□ -2.07
PRE4YFR050C HES1P35843 434 aa2.13□□□□□ -2.07
PRE4YFR050C MRPL36P36531 177 aa2.13□□□□□ -2.07
PRE4YFR050C ARN1P38731 627 aa2.13□□□□□ -2.07
PRE4YFR050C YIL086CP40503 102 aa2.13□□□□□ -2.07
PRE4YFR050C CDC1P40986 491 aa2.13□□□□□ -2.07
PRE4YFR050C YJL107CP42947 387 aa2.13□□□□□ -2.07
PRE4YFR050C CPR6P53691 371 aaKnown RBP2.13□□□□□ -2.07
PRE4YFR050C TRM112P53738 135 aaPredicted RBP2.13□□□□□ -2.07
PRE4YFR050C IPI3P53877 555 aa2.13□□□□□ -2.07
PRE4YFR050C BOP3P53958 396 aa2.13□□□□□ -2.07
PRE4YFR050C RPL15BP54780 204 aaPredicted RBP2.13□□□□□ -2.07
PRE4YFR050C YSA1Q01976 231 aa2.13□□□□□ -2.07
PRE4YFR050C MUB1Q03162 620 aa2.13□□□□□ -2.07
PRE4YFR050C GTB1Q04924 702 aa2.13□□□□□ -2.07
PRE4YFR050C PDR8Q06149 701 aa2.13□□□□□ -2.07
PRE4YFR050C YLR352WQ06479 807 aa2.13□□□□□ -2.07
PRE4YFR050C SNA4Q07549 140 aa2.13□□□□□ -2.07
PRE4YFR050C TMC1Q08422 150 aaPredicted RBP2.13□□□□□ -2.07
PRE4YFR050C CIR2Q08822 631 aa2.13□□□□□ -2.07
PRE4YFR050C ATX2Q12067 313 aa2.13□□□□□ -2.07
PRE4YFR050C RPL15AP05748 204 aaKnown RBP2.12□□□□□ -2.07
PRE4YFR050C CHS1P08004 1131 aa2.12□□□□□ -2.07
PRE4YFR050C MSS18P08593 268 aa2.12□□□□□ -2.07
PRE4YFR050C ASP3-2P0CX77 362 aa2.12□□□□□ -2.07
PRE4YFR050C ASP3-3P0CX78 362 aa2.12□□□□□ -2.07
PRE4YFR050C ASP3-4P0CX79 362 aa2.12□□□□□ -2.07
PRE4YFR050C YER190C-BP0CX94 160 aa2.12□□□□□ -2.07
PRE4YFR050C YEL077W-AP0CX95 160 aa2.12□□□□□ -2.07
PRE4YFR050C YGR296C-BP0CX96 160 aa2.12□□□□□ -2.07
PRE4YFR050C YPL283W-BP0CX97 160 aa2.12□□□□□ -2.07
PRE4YFR050C YPR204C-AP0CX98 160 aa2.12□□□□□ -2.07
PRE4YFR050C ASP3-1P0CZ17 362 aa2.12□□□□□ -2.07
PRE4YFR050C AIM17P23180 465 aaKnown RBP2.12□□□□□ -2.07
PRE4YFR050C CLB4P24871 460 aa2.12□□□□□ -2.07
PRE4YFR050C RFA2P26754 273 aaKnown RBP2.12□□□□□ -2.07
PRE4YFR050C FRE1P32791 686 aa2.12□□□□□ -2.07
Retrieved 100 of 5,963 RNA–protein pairs in 86.1 ms