RNA–Protein interactions for RNA: YDR504C

SPG3, Transcript of Protein required for high temperature survival during stationary phase, yeast

Gene SPG3, Length 384 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SPG3	YDR504C	YHL041W	P38730	149 aa		0.82	□□□□□ -2.28
SPG3	YDR504C	LAM5	P43560	674 aa		0.82	□□□□□ -2.28
SPG3	YDR504C	ALK1	P43633	760 aa	Known RBP	0.82	□□□□□ -2.28
SPG3	YDR504C	DLD2	P46681	530 aa	Known RBP	0.82	□□□□□ -2.28
SPG3	YDR504C	SLF1	Q12034	447 aa	Known RBP	0.82	□□□□□ -2.28
SPG3	YDR504C	IZH2	Q12442	317 aa		0.82	□□□□□ -2.28
SPG3	YDR504C	LEU4	P06208	619 aa	Known RBP	0.81	□□□□□ -2.28
SPG3	YDR504C	YEF3	P16521	1044 aa	Known RBP	0.81	□□□□□ -2.28
SPG3	YDR504C	TPS2	P31688	896 aa	Known RBP	0.81	□□□□□ -2.28
SPG3	YDR504C	ATP11	P32453	318 aa		0.81	□□□□□ -2.28
SPG3	YDR504C	DPH2	P32461	534 aa		0.81	□□□□□ -2.28
SPG3	YDR504C	CNS1	P33313	385 aa		0.81	□□□□□ -2.28
SPG3	YDR504C	VIP1	Q06685	1146 aa	Known RBP	0.81	□□□□□ -2.28
SPG3	YDR504C	APC2	Q12440	853 aa		0.81	□□□□□ -2.28
SPG3	YDR504C	ARD1	P07347	238 aa	Predicted RBP	0.8	□□□□□ -2.28
SPG3	YDR504C	PTP2	P29461	750 aa		0.8	□□□□□ -2.28
SPG3	YDR504C	SSE2	P32590	693 aa	Known RBP	0.8	□□□□□ -2.28
SPG3	YDR504C	RML2	P32611	393 aa		0.8	□□□□□ -2.28
SPG3	YDR504C	RTC2	P38279	296 aa		0.8	□□□□□ -2.28
SPG3	YDR504C	AIM22	P47051	409 aa		0.8	□□□□□ -2.28
SPG3	YDR504C	AAD10	P47182	288 aa		0.8	□□□□□ -2.28
SPG3	YDR504C	TOF2	Q02208	771 aa		0.8	□□□□□ -2.28
SPG3	YDR504C	PNG1	Q02890	363 aa		0.8	□□□□□ -2.28
SPG3	YDR504C	ECM7	Q06200	448 aa		0.8	□□□□□ -2.28
SPG3	YDR504C	MUM3	Q08750	479 aa		0.8	□□□□□ -2.28
SPG3	YDR504C	MF(ALPHA)1	P01149	165 aa		0.79	□□□□□ -2.28
SPG3	YDR504C	ELO2	P25358	347 aa		0.79	□□□□□ -2.28
SPG3	YDR504C	PIN3	Q06449	215 aa		0.79	□□□□□ -2.28
SPG3	YDR504C	YPL272C	Q08984	517 aa		0.79	□□□□□ -2.28
SPG3	YDR504C	TRM8	Q12009	286 aa		0.79	□□□□□ -2.28
SPG3	YDR504C	MRP13	P12686	339 aa		0.78	□□□□□ -2.28
SPG3	YDR504C	PHO81	P17442	1178 aa		0.78	□□□□□ -2.28
SPG3	YDR504C	SLY1	P22213	666 aa		0.78	□□□□□ -2.28
SPG3	YDR504C	ITR1	P30605	584 aa		0.78	□□□□□ -2.28
SPG3	YDR504C	YPS5	P53057	165 aa		0.78	□□□□□ -2.28
SPG3	YDR504C	RPN14	P53196	417 aa		0.78	□□□□□ -2.28
SPG3	YDR504C	ADA2	Q02336	434 aa		0.78	□□□□□ -2.28
SPG3	YDR504C	PDS5	Q04264	1277 aa		0.78	□□□□□ -2.28
SPG3	YDR504C	HRT1	Q08273	121 aa		0.78	□□□□□ -2.28
SPG3	YDR504C	SNX3	Q08826	162 aa	Known RBP	0.78	□□□□□ -2.28
SPG3	YDR504C	TCO89	Q08921	799 aa		0.78	□□□□□ -2.28
SPG3	YDR504C	MSM1	P22438	575 aa		0.77	□□□□□ -2.29
SPG3	YDR504C	TIP1	P27654	210 aa	Predicted RBP	0.77	□□□□□ -2.29
SPG3	YDR504C	HIR2	P32480	875 aa		0.77	□□□□□ -2.29
SPG3	YDR504C	YCR041W	P37265	110 aa		0.77	□□□□□ -2.29
SPG3	YDR504C	MAL33	P38157	468 aa		0.77	□□□□□ -2.29
SPG3	YDR504C	YPT35	P38815	214 aa	Known RBP	0.77	□□□□□ -2.29
SPG3	YDR504C	SEC9	P40357	651 aa		0.77	□□□□□ -2.29
SPG3	YDR504C	SYG1	P40528	902 aa		0.77	□□□□□ -2.29
SPG3	YDR504C	SSN8	P47821	323 aa		0.77	□□□□□ -2.29
SPG3	YDR504C	YPL107W	Q02873	248 aa		0.77	□□□□□ -2.29
SPG3	YDR504C	LUC7	Q07508	261 aa	Predicted RBP	0.77	□□□□□ -2.29
SPG3	YDR504C	SGS1	P35187	1447 aa		0.76	□□□□□ -2.29
SPG3	YDR504C	AAT2	P23542	418 aa	Known RBP	0.76	□□□□□ -2.29
SPG3	YDR504C	MUD1	P32605	298 aa	Known RBP	0.76	□□□□□ -2.29
SPG3	YDR504C	YGP1	P38616	354 aa	Known RBP	0.76	□□□□□ -2.29
SPG3	YDR504C	BAT1	P38891	393 aa	Known RBP	0.76	□□□□□ -2.29
SPG3	YDR504C	YER184C	P39961	794 aa		0.76	□□□□□ -2.29
SPG3	YDR504C	YFL012W	P43580	148 aa		0.76	□□□□□ -2.29
SPG3	YDR504C	PEX8	P53248	589 aa		0.76	□□□□□ -2.29
SPG3	YDR504C	YMR181C	Q03231	154 aa		0.76	□□□□□ -2.29
SPG3	YDR504C	MRD1	Q06106	887 aa	Known RBP	0.76	□□□□□ -2.29
SPG3	YDR504C	CTI6	Q08923	506 aa		0.76	□□□□□ -2.29
SPG3	YDR504C	TMA7	Q3E764	64 aa	Known RBP	0.76	□□□□□ -2.29
SPG3	YDR504C	EST1	P17214	699 aa	Predicted RBP	0.75	□□□□□ -2.29
SPG3	YDR504C	SNT1	P25357	1226 aa		0.75	□□□□□ -2.29
SPG3	YDR504C	KEL1	P38853	1164 aa	Known RBP	0.75	□□□□□ -2.29
SPG3	YDR504C	SPO73	P40031	143 aa		0.75	□□□□□ -2.29
SPG3	YDR504C	UPF3	P48412	387 aa	Known RBP	0.75	□□□□□ -2.29
SPG3	YDR504C	YGL262W	P53054	175 aa		0.75	□□□□□ -2.29
SPG3	YDR504C	YIP5	P53108	310 aa		0.75	□□□□□ -2.29
SPG3	YDR504C	NDE2	Q07500	545 aa		0.75	□□□□□ -2.29
SPG3	YDR504C	CYM1	P32898	989 aa		0.74	□□□□□ -2.29
SPG3	YDR504C	POP1	P41812	875 aa		0.74	□□□□□ -2.29
SPG3	YDR504C	BNA1	P47096	177 aa		0.74	□□□□□ -2.29
SPG3	YDR504C	CPR7	P47103	393 aa		0.74	□□□□□ -2.29
SPG3	YDR504C	TPS1	Q00764	495 aa	Known RBP	0.74	□□□□□ -2.29
SPG3	YDR504C	PKH2	Q12236	1081 aa	Known RBP	0.74	□□□□□ -2.29
SPG3	YDR504C	YDR061W	Q12298	539 aa		0.74	□□□□□ -2.29
SPG3	YDR504C	COR1	P07256	457 aa		0.73	□□□□□ -2.29
SPG3	YDR504C	NAM2	P11325	894 aa		0.73	□□□□□ -2.29
SPG3	YDR504C	AGA2	P32781	87 aa		0.73	□□□□□ -2.29
SPG3	YDR504C	REG2	P38232	338 aa		0.73	□□□□□ -2.29
SPG3	YDR504C	OXA1	P39952	402 aa		0.73	□□□□□ -2.29
SPG3	YDR504C	ACA1	P39970	489 aa		0.73	□□□□□ -2.29
SPG3	YDR504C	ALD5	P40047	520 aa	Known RBP	0.73	□□□□□ -2.29
SPG3	YDR504C	CAF130	P53280	1122 aa	Predicted RBP	0.73	□□□□□ -2.29
SPG3	YDR504C	MFB1	Q04922	465 aa		0.73	□□□□□ -2.29
SPG3	YDR504C	BLS1	Q06071	122 aa		0.73	□□□□□ -2.29
SPG3	YDR504C	YLL032C	Q07834	825 aa	Known RBP RIP-Chip data	0.73	□□□□□ -2.29	not detected
SPG3	YDR504C	TIM18	Q08749	192 aa		0.73	□□□□□ -2.29
SPG3	YDR504C	YPR022C	Q12139	1133 aa		0.73	□□□□□ -2.29
SPG3	YDR504C	STP2	P38704	541 aa		0.72	□□□□□ -2.29
SPG3	YDR504C	MDE1	P47095	244 aa		0.72	□□□□□ -2.29
SPG3	YDR504C	TEF1	P02994	458 aa	Known RBP	0.71	□□□□□ -2.3
SPG3	YDR504C	SNF1	P06782	633 aa	Known RBP	0.71	□□□□□ -2.3
SPG3	YDR504C	PRP2	P20095	876 aa	Predicted RBP	0.71	□□□□□ -2.3
SPG3	YDR504C	RPI1	P23250	407 aa	Known RBP	0.71	□□□□□ -2.3
SPG3	YDR504C	ZUO1	P32527	433 aa	Known RBP	0.71	□□□□□ -2.3
SPG3	YDR504C	AUR1	P36107	401 aa	Predicted RBP	0.71	□□□□□ -2.3

Retrieved 100 of 5,963 RNA–protein pairs in 18.9 ms