RNA–Protein interactions for RNA: YDR379C-A

SDH6, Transcript of Mitochondrial protein involved in assembly of succinate dehydrogenase, yeastyeast

Gene SDH6, Length 240 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SDH6YDR379C-A MUM3Q08750 479 aa0.5□□□□□ -2.33
SDH6YDR379C-A CTI6Q08923 506 aa0.5□□□□□ -2.33
SDH6YDR379C-A TRM8Q12009 286 aa0.5□□□□□ -2.33
SDH6YDR379C-A LEU4P06208 619 aaKnown RBP0.49□□□□□ -2.33
SDH6YDR379C-A SNF1P06782 633 aaKnown RBP0.49□□□□□ -2.33
SDH6YDR379C-A CBP6P07253 162 aaPredicted RBP0.49□□□□□ -2.33
SDH6YDR379C-A MAS2P11914 482 aa0.49□□□□□ -2.33
SDH6YDR379C-A EST1P17214 699 aaPredicted RBP0.49□□□□□ -2.33
SDH6YDR379C-A SPO7P18410 259 aa0.49□□□□□ -2.33
SDH6YDR379C-A ART10P18634 518 aaKnown RBP0.49□□□□□ -2.33
SDH6YDR379C-A PRP2P20095 876 aaPredicted RBP0.49□□□□□ -2.33
SDH6YDR379C-A YIH1P25637 258 aa0.49□□□□□ -2.33
SDH6YDR379C-A TIP1P27654 210 aaPredicted RBP0.49□□□□□ -2.33
SDH6YDR379C-A PAP1P29468 568 aaKnown RBP0.49□□□□□ -2.33
SDH6YDR379C-A ATP11P32453 318 aa0.49□□□□□ -2.33
SDH6YDR379C-A DPH2P32461 534 aa0.49□□□□□ -2.33
SDH6YDR379C-A REC114P32841 428 aa0.49□□□□□ -2.33
SDH6YDR379C-A AUR1P36107 401 aaPredicted RBP0.49□□□□□ -2.33
SDH6YDR379C-A MAL33P38157 468 aa0.49□□□□□ -2.33
SDH6YDR379C-A MIG3P39943 394 aa0.49□□□□□ -2.33
SDH6YDR379C-A BNA1P47096 177 aa0.49□□□□□ -2.33
SDH6YDR379C-A ATP22P50273 684 aaPredicted RBP0.49□□□□□ -2.33
SDH6YDR379C-A PCP1P53259 346 aa0.49□□□□□ -2.33
SDH6YDR379C-A CRH1P53301 507 aa0.49□□□□□ -2.33
SDH6YDR379C-A MRPS16Q02608 121 aa0.49□□□□□ -2.33
SDH6YDR379C-A YDR239CQ03780 787 aa0.49□□□□□ -2.33
SDH6YDR379C-A PPM1Q04081 328 aa0.49□□□□□ -2.33
SDH6YDR379C-A BUD22Q04347 519 aaKnown RBP0.49□□□□□ -2.33
SDH6YDR379C-A COQ9Q05779 260 aa0.49□□□□□ -2.33
SDH6YDR379C-A VID22Q05934 901 aa0.49□□□□□ -2.33
SDH6YDR379C-A NDE2Q07500 545 aa0.49□□□□□ -2.33
SDH6YDR379C-A DNL4Q08387 944 aaPredicted RBP0.49□□□□□ -2.33
SDH6YDR379C-A FMP40Q08968 688 aaPredicted RBP0.49□□□□□ -2.33
SDH6YDR379C-A RAX2Q12465 1220 aa0.49□□□□□ -2.33
SDH6YDR379C-A YOL087CQ99247 1116 aa0.49□□□□□ -2.33
SDH6YDR379C-A ADH1P00330 348 aaKnown RBP0.48□□□□□ -2.33
SDH6YDR379C-A COX4P04037 155 aa0.48□□□□□ -2.33
SDH6YDR379C-A CYC3P06182 269 aa0.48□□□□□ -2.33
SDH6YDR379C-A OLE1P21147 510 aaKnown RBP0.48□□□□□ -2.33
SDH6YDR379C-A ELO2P25358 347 aa0.48□□□□□ -2.33
SDH6YDR379C-A SMY1P32364 656 aaKnown RBP0.48□□□□□ -2.33
SDH6YDR379C-A CSE2P33308 149 aa0.48□□□□□ -2.33
SDH6YDR379C-A UBP11P36026 717 aa0.48□□□□□ -2.33
SDH6YDR379C-A YBR137WP38276 179 aa0.48□□□□□ -2.33
SDH6YDR379C-A MBB1P39534 108 aa0.48□□□□□ -2.33
SDH6YDR379C-A ERP2P39704 215 aa0.48□□□□□ -2.33
SDH6YDR379C-A YER010CP40011 234 aa0.48□□□□□ -2.33
SDH6YDR379C-A SYG1P40528 902 aa0.48□□□□□ -2.33
SDH6YDR379C-A LAM5P43560 674 aa0.48□□□□□ -2.33
SDH6YDR379C-A ARC1P46672 376 aaKnown RBP0.48□□□□□ -2.33
SDH6YDR379C-A DLD2P46681 530 aaKnown RBP0.48□□□□□ -2.33
SDH6YDR379C-A SIP4P46954 829 aa0.48□□□□□ -2.33
SDH6YDR379C-A CAF130P53280 1122 aaPredicted RBP0.48□□□□□ -2.33
SDH6YDR379C-A SOV1Q04748 898 aa0.48□□□□□ -2.33
SDH6YDR379C-A YLL032CQ07834 825 aaKnown RBP RIP-Chip data0.48□□□□□ -2.33not detected
SDH6YDR379C-A TIM18Q08749 192 aa0.48□□□□□ -2.33
SDH6YDR379C-A PKH2Q12236 1081 aaKnown RBP0.48□□□□□ -2.33
SDH6YDR379C-A SGS1P35187 1447 aa0.47□□□□□ -2.33
SDH6YDR379C-A RAV1P47104 1357 aa0.47□□□□□ -2.33
SDH6YDR379C-A COR1P07256 457 aa0.47□□□□□ -2.33
SDH6YDR379C-A MRP13P12686 339 aa0.47□□□□□ -2.33
SDH6YDR379C-A SLY1P22213 666 aa0.47□□□□□ -2.33
SDH6YDR379C-A YCK1P23291 538 aa0.47□□□□□ -2.33
SDH6YDR379C-A AAT2P23542 418 aaKnown RBP0.47□□□□□ -2.33
SDH6YDR379C-A PRE8P23639 250 aa0.47□□□□□ -2.33
SDH6YDR379C-A PRR1P28708 518 aa0.47□□□□□ -2.33
SDH6YDR379C-A TPS2P31688 896 aaKnown RBP0.47□□□□□ -2.33
SDH6YDR379C-A MUD1P32605 298 aaKnown RBP0.47□□□□□ -2.33
SDH6YDR379C-A YCR041WP37265 110 aa0.47□□□□□ -2.33
SDH6YDR379C-A CBP4P37267 147 aa0.47□□□□□ -2.33
SDH6YDR379C-A MUM2P38236 366 aa0.47□□□□□ -2.33
SDH6YDR379C-A RTC2P38279 296 aa0.47□□□□□ -2.33
SDH6YDR379C-A ALD5P40047 520 aaKnown RBP0.47□□□□□ -2.33
SDH6YDR379C-A ALG5P40350 334 aa0.47□□□□□ -2.33
SDH6YDR379C-A POP1P41812 875 aa0.47□□□□□ -2.33
SDH6YDR379C-A YIP1P53039 248 aa0.47□□□□□ -2.33
SDH6YDR379C-A YGR018CP53211 109 aa0.47□□□□□ -2.33
SDH6YDR379C-A ARE2P53629 642 aaKnown RBP0.47□□□□□ -2.33
SDH6YDR379C-A SLG1P54867 378 aa0.47□□□□□ -2.33
SDH6YDR379C-A TPS1Q00764 495 aaKnown RBP0.47□□□□□ -2.33
SDH6YDR379C-A YPL107WQ02873 248 aa0.47□□□□□ -2.33
SDH6YDR379C-A YML037CQ03703 340 aa0.47□□□□□ -2.33
SDH6YDR379C-A RAD30Q04049 632 aa0.47□□□□□ -2.33
SDH6YDR379C-A SNO4Q04902 237 aa0.47□□□□□ -2.33
SDH6YDR379C-A MFB1Q04922 465 aa0.47□□□□□ -2.33
SDH6YDR379C-A PIN3Q06449 215 aa0.47□□□□□ -2.33
SDH6YDR379C-A SNX3Q08826 162 aaKnown RBP0.47□□□□□ -2.33
SDH6YDR379C-A HSP33Q08914 237 aaKnown RBP0.47□□□□□ -2.33
SDH6YDR379C-A HSP32Q08992 237 aa0.47□□□□□ -2.33
SDH6YDR379C-A JID1Q12350 301 aa0.47□□□□□ -2.33
SDH6YDR379C-A APC2Q12440 853 aa0.47□□□□□ -2.33
SDH6YDR379C-A IZH2Q12442 317 aa0.47□□□□□ -2.33
SDH6YDR379C-A SPE4Q12455 300 aa0.47□□□□□ -2.33
SDH6YDR379C-A TOP1P04786 769 aa0.46□□□□□ -2.34
SDH6YDR379C-A CDC24P11433 854 aaPredicted RBP0.46□□□□□ -2.34
SDH6YDR379C-A KAR3P17119 729 aa0.46□□□□□ -2.34
SDH6YDR379C-A RPB5P20434 215 aa0.46□□□□□ -2.34
SDH6YDR379C-A SNT1P25357 1226 aa0.46□□□□□ -2.34
SDH6YDR379C-A ITR1P30605 584 aa0.46□□□□□ -2.34
SDH6YDR379C-A HIR2P32480 875 aa0.46□□□□□ -2.34
Retrieved 100 of 5,963 RNA–protein pairs in 24.3 ms