RNA–Protein interactions for RNA: YDR192C

NUP42, Transcript of FG-nucleoporin component of central core of the nuclear pore complex, yeast

Gene NUP42, Length 1,293 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NUP42	YDR192C	YJR112W-A	Q3E743	109 aa		4.61	□□□□□ -1.67
NUP42	YDR192C	TAO3	P40468	2376 aa		4.6	□□□□□ -1.67
NUP42	YDR192C	RPS3	P05750	240 aa	Known RBP	4.6	□□□□□ -1.67
NUP42	YDR192C	CBS1	P14066	229 aa		4.6	□□□□□ -1.67
NUP42	YDR192C	PMS1	P14242	873 aa		4.6	□□□□□ -1.67
NUP42	YDR192C	CNA1	P23287	553 aa		4.6	□□□□□ -1.67
NUP42	YDR192C	CLB2	P24869	491 aa		4.6	□□□□□ -1.67
NUP42	YDR192C	POL4	P25615	582 aa		4.6	□□□□□ -1.67
NUP42	YDR192C	SHP1	P34223	423 aa		4.6	□□□□□ -1.67
NUP42	YDR192C	DBP7	P36120	742 aa	Known RBP	4.6	□□□□□ -1.67
NUP42	YDR192C	YTA12	P40341	825 aa		4.6	□□□□□ -1.67
NUP42	YDR192C	LCB2	P40970	561 aa		4.6	□□□□□ -1.67
NUP42	YDR192C	PSA1	P41940	361 aa	Known RBP	4.6	□□□□□ -1.67
NUP42	YDR192C	MRX6	P48564	524 aa		4.6	□□□□□ -1.67
NUP42	YDR192C	ALT2	P52892	507 aa		4.6	□□□□□ -1.67
NUP42	YDR192C	RPL22B	P56628	122 aa	Known RBP	4.6	□□□□□ -1.67
NUP42	YDR192C	NGL3	Q03210	505 aa		4.6	□□□□□ -1.67
NUP42	YDR192C	SXM1	Q04175	944 aa	Known RBP	4.6	□□□□□ -1.67
NUP42	YDR192C	YMR114C	Q04471	368 aa	Known RBP	4.6	□□□□□ -1.67
NUP42	YDR192C	SOV1	Q04748	898 aa		4.6	□□□□□ -1.67
NUP42	YDR192C	MFB1	Q04922	465 aa		4.6	□□□□□ -1.67
NUP42	YDR192C	YDL057W	Q07379	328 aa		4.6	□□□□□ -1.67
NUP42	YDR192C	CIR2	Q08822	631 aa		4.6	□□□□□ -1.67
NUP42	YDR192C	FRE7	Q12333	620 aa		4.6	□□□□□ -1.67
NUP42	YDR192C	GIS3	Q12418	502 aa		4.6	□□□□□ -1.67
NUP42	YDR192C	RRI1	Q12468	440 aa		4.6	□□□□□ -1.67
NUP42	YDR192C	MYO1	P08964	1928 aa		4.6	□□□□□ -1.67
NUP42	YDR192C	ARD1	P07347	238 aa	Predicted RBP	4.59	□□□□□ -1.67
NUP42	YDR192C	DFR1	P07807	211 aa	Known RBP RIP-Chip data	4.59	□□□□□ -1.67	not detected
NUP42	YDR192C	POX1	P13711	748 aa		4.59	□□□□□ -1.67
NUP42	YDR192C	RAD57	P25301	460 aa		4.59	□□□□□ -1.67
NUP42	YDR192C	PGS1	P25578	521 aa		4.59	□□□□□ -1.67
NUP42	YDR192C	DBF4	P32325	704 aa		4.59	□□□□□ -1.67
NUP42	YDR192C	CSG2	P35206	410 aa		4.59	□□□□□ -1.67
NUP42	YDR192C	MIA40	P36046	403 aa		4.59	□□□□□ -1.67
NUP42	YDR192C	ELO1	P39540	310 aa		4.59	□□□□□ -1.67
NUP42	YDR192C	RGI2	P40188	164 aa		4.59	□□□□□ -1.67
NUP42	YDR192C	SEC9	P40357	651 aa		4.59	□□□□□ -1.67
NUP42	YDR192C	COP1	P53622	1201 aa	Known RBP	4.59	□□□□□ -1.67
NUP42	YDR192C	ARE2	P53629	642 aa	Known RBP	4.59	□□□□□ -1.67
NUP42	YDR192C	YNL247W	P53852	767 aa	Known RBP	4.59	□□□□□ -1.67
NUP42	YDR192C	MRPL19	P53875	158 aa		4.59	□□□□□ -1.67
NUP42	YDR192C	NOP13	P53883	403 aa	Known RBP RIP-Chip data	4.59	□□□□□ -1.67	not detected
NUP42	YDR192C	YNL146W	P53906	100 aa		4.59	□□□□□ -1.67
NUP42	YDR192C	YNL144C	P53907	740 aa		4.59	□□□□□ -1.67
NUP42	YDR192C	BOP3	P53958	396 aa		4.59	□□□□□ -1.67
NUP42	YDR192C	EFM6	P53970	246 aa		4.59	□□□□□ -1.67
NUP42	YDR192C	ARK1	P53974	638 aa		4.59	□□□□□ -1.67
NUP42	YDR192C	VTI1	Q04338	217 aa		4.59	□□□□□ -1.67
NUP42	YDR192C	THI7	Q05998	598 aa		4.59	□□□□□ -1.67
NUP42	YDR192C	YPL272C	Q08984	517 aa		4.59	□□□□□ -1.67
NUP42	YDR192C	CRC1	Q12289	327 aa		4.59	□□□□□ -1.67
NUP42	YDR192C	YDR034W-B	Q6Q5X2	51 aa		4.59	□□□□□ -1.67
NUP42	YDR192C	JIP3	O13555	125 aa		4.58	□□□□□ -1.68
NUP42	YDR192C	CHO1	P08456	276 aa		4.58	□□□□□ -1.68
NUP42	YDR192C	GAC1	P28006	793 aa		4.58	□□□□□ -1.68
NUP42	YDR192C	SSE2	P32590	693 aa	Known RBP	4.58	□□□□□ -1.68
NUP42	YDR192C	TMT1	P32643	299 aa		4.58	□□□□□ -1.68
NUP42	YDR192C	SHE3	P38272	425 aa	Known RBP	4.58	□□□□□ -1.68
NUP42	YDR192C	SPP381	P38282	291 aa	Predicted RBP	4.58	□□□□□ -1.68
NUP42	YDR192C	DBP8	P38719	431 aa		4.58	□□□□□ -1.68
NUP42	YDR192C	SMF1	P38925	575 aa		4.58	□□□□□ -1.68
NUP42	YDR192C	VPS25	P47142	202 aa		4.58	□□□□□ -1.68
NUP42	YDR192C	YGR111W	P53265	400 aa		4.58	□□□□□ -1.68
NUP42	YDR192C	YNL134C	P53912	376 aa	Known RBP	4.58	□□□□□ -1.68
NUP42	YDR192C	TIM10	P87108	93 aa		4.58	□□□□□ -1.68
NUP42	YDR192C	LUC7	Q07508	261 aa	Predicted RBP	4.58	□□□□□ -1.68
NUP42	YDR192C	NOP6	Q07623	225 aa	Known RBP	4.58	□□□□□ -1.68
NUP42	YDR192C	PFA4	Q12006	378 aa		4.58	□□□□□ -1.68
NUP42	YDR192C	SCM3	Q12334	223 aa		4.58	□□□□□ -1.68
NUP42	YDR192C	AHC1	Q12433	566 aa		4.58	□□□□□ -1.68
NUP42	YDR192C	SPE4	Q12455	300 aa		4.58	□□□□□ -1.68
NUP42	YDR192C	YPT6	Q99260	215 aa		4.58	□□□□□ -1.68
NUP42	YDR192C	YLR462W	O13556	202 aa		4.57	□□□□□ -1.68
NUP42	YDR192C	ARG81	P05085	880 aa		4.57	□□□□□ -1.68
NUP42	YDR192C	HIP1	P06775	603 aa		4.57	□□□□□ -1.68
NUP42	YDR192C	YMR085W	P0CF18	432 aa		4.57	□□□□□ -1.68
NUP42	YDR192C	EFB1	P32471	206 aa	Known RBP	4.57	□□□□□ -1.68
NUP42	YDR192C	VID24	P38263	362 aa		4.57	□□□□□ -1.68
NUP42	YDR192C	TSC10	P38342	320 aa		4.57	□□□□□ -1.68
NUP42	YDR192C	HIS2	P38635	335 aa		4.57	□□□□□ -1.68
NUP42	YDR192C	YHL049C	P38722	271 aa		4.57	□□□□□ -1.68
NUP42	YDR192C	CIN4	P39110	191 aa		4.57	□□□□□ -1.68
NUP42	YDR192C	YEL075C	P39972	122 aa		4.57	□□□□□ -1.68
NUP42	YDR192C	YER189W	P40104	122 aa		4.57	□□□□□ -1.68
NUP42	YDR192C	YFL064C	P43540	174 aa		4.57	□□□□□ -1.68
NUP42	YDR192C	LAM5	P43560	674 aa		4.57	□□□□□ -1.68
NUP42	YDR192C	PTR3	P43606	678 aa		4.57	□□□□□ -1.68
NUP42	YDR192C	CPR7	P47103	393 aa		4.57	□□□□□ -1.68
NUP42	YDR192C	ERG26	P53199	349 aa	Known RBP	4.57	□□□□□ -1.68
NUP42	YDR192C	LGE1	Q02796	332 aa	Known RBP	4.57	□□□□□ -1.68
NUP42	YDR192C	CWC21	Q03375	135 aa	Known RBP	4.57	□□□□□ -1.68
NUP42	YDR192C	CAC2	Q04199	468 aa		4.57	□□□□□ -1.68
NUP42	YDR192C	EMI2	Q04409	500 aa	Known RBP	4.57	□□□□□ -1.68
NUP42	YDR192C	ARP10	Q04549	284 aa		4.57	□□□□□ -1.68
NUP42	YDR192C	DPB4	Q04603	196 aa	Known RBP	4.57	□□□□□ -1.68
NUP42	YDR192C	ECI1	Q05871	280 aa		4.57	□□□□□ -1.68
NUP42	YDR192C	MCP2	Q06567	569 aa		4.57	□□□□□ -1.68
NUP42	YDR192C	YBL111C	Q3E7Y5	667 aa		4.57	□□□□□ -1.68
NUP42	YDR192C	SEY1	Q99287	776 aa		4.57	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 84.3 ms