RNA–Protein interactions for RNA: YDL140C

RPO21, Transcript of RNA polymerase II largest subunit B220, yeast

Gene RPO21, Length 5,202 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPO21	YDL140C	SUL2	Q12325	893 aa		3.69	□□□□□ -1.82
RPO21	YDL140C	AHA1	Q12449	350 aa	Known RBP	3.69	□□□□□ -1.82
RPO21	YDL140C	CDC4	P07834	779 aa		3.68	□□□□□ -1.82
RPO21	YDL140C	MRS4	P23500	304 aa		3.68	□□□□□ -1.82
RPO21	YDL140C	CLB4	P24871	460 aa		3.68	□□□□□ -1.82
RPO21	YDL140C	MVD1	P32377	396 aa	Known RBP	3.68	□□□□□ -1.82
RPO21	YDL140C	ATP11	P32453	318 aa		3.68	□□□□□ -1.82
RPO21	YDL140C	NAB2	P32505	525 aa	Known RBP RIP-Chip data	3.68	□□□□□ -1.82	not detected
RPO21	YDL140C	MRT4	P33201	236 aa	Known RBP	3.68	□□□□□ -1.82
RPO21	YDL140C	YKR015C	P36111	568 aa		3.68	□□□□□ -1.82
RPO21	YDL140C	CEM1	P39525	442 aa		3.68	□□□□□ -1.82
RPO21	YDL140C	ARG2	P40360	574 aa		3.68	□□□□□ -1.82
RPO21	YDL140C	VNX1	P42839	908 aa		3.68	□□□□□ -1.82
RPO21	YDL140C	ZIM17	P42844	174 aa		3.68	□□□□□ -1.82
RPO21	YDL140C	VAC7	P53950	1165 aa		3.68	□□□□□ -1.82
RPO21	YDL140C	KTR6	P54070	446 aa		3.68	□□□□□ -1.82
RPO21	YDL140C	YDR239C	Q03780	787 aa		3.68	□□□□□ -1.82
RPO21	YDL140C	YMR160W	Q03823	816 aa		3.68	□□□□□ -1.82
RPO21	YDL140C	GMC1	Q04399	608 aa		3.68	□□□□□ -1.82
RPO21	YDL140C	COQ9	Q05779	260 aa		3.68	□□□□□ -1.82
RPO21	YDL140C	YOL159C	Q08300	171 aa		3.68	□□□□□ -1.82
RPO21	YDL140C	RSB1	Q08417	382 aa		3.68	□□□□□ -1.82
RPO21	YDL140C	ALG7	P07286	448 aa		3.68	□□□□□ -1.82
RPO21	YDL140C	EST1	P17214	699 aa	Predicted RBP	3.68	□□□□□ -1.82
RPO21	YDL140C	OLE1	P21147	510 aa	Known RBP	3.68	□□□□□ -1.82
RPO21	YDL140C	VPS34	P22543	875 aa		3.68	□□□□□ -1.82
RPO21	YDL140C	TMT1	P32643	299 aa		3.68	□□□□□ -1.82
RPO21	YDL140C	TOD6	P34219	525 aa		3.68	□□□□□ -1.82
RPO21	YDL140C	RCY1	P39531	840 aa		3.68	□□□□□ -1.82
RPO21	YDL140C	BOL3	P39724	118 aa		3.68	□□□□□ -1.82
RPO21	YDL140C	YPL039W	Q03080	316 aa		3.68	□□□□□ -1.82
RPO21	YDL140C	TRM82	Q03774	444 aa		3.68	□□□□□ -1.82
RPO21	YDL140C	GRX3	Q03835	250 aa		3.68	□□□□□ -1.82
RPO21	YDL140C	HLR1	Q04429	423 aa		3.68	□□□□□ -1.82
RPO21	YDL140C	SUE1	Q06524	206 aa		3.68	□□□□□ -1.82
RPO21	YDL140C	NOP6	Q07623	225 aa	Known RBP	3.68	□□□□□ -1.82
RPO21	YDL140C	PHA2	P32452	334 aa		3.68	□□□□□ -1.82
RPO21	YDL140C	KAR9	P32526	644 aa		3.68	□□□□□ -1.82
RPO21	YDL140C	CDC5	P32562	705 aa		3.68	□□□□□ -1.82
RPO21	YDL140C	SRP101	P32916	621 aa		3.68	□□□□□ -1.82
RPO21	YDL140C	YER130C	P39959	443 aa		3.68	□□□□□ -1.82
RPO21	YDL140C	PIC2	P40035	300 aa		3.68	□□□□□ -1.82
RPO21	YDL140C	ATG32	P40458	529 aa		3.68	□□□□□ -1.82
RPO21	YDL140C	ECM27	P47144	725 aa		3.68	□□□□□ -1.82
RPO21	YDL140C	YGL039W	P53183	348 aa	Known RBP	3.68	□□□□□ -1.82
RPO21	YDL140C	MET31	Q03081	177 aa		3.68	□□□□□ -1.82
RPO21	YDL140C	MMT1	Q03218	510 aa		3.68	□□□□□ -1.82
RPO21	YDL140C	HFD1	Q04458	532 aa		3.68	□□□□□ -1.82
RPO21	YDL140C	SPR28	Q04921	423 aa		3.68	□□□□□ -1.82
RPO21	YDL140C	GGA1	Q06336	557 aa		3.68	□□□□□ -1.82
RPO21	YDL140C	PLB3	Q08108	686 aa		3.68	□□□□□ -1.82
RPO21	YDL140C	YOR352W	Q08816	343 aa		3.68	□□□□□ -1.82
RPO21	YDL140C	LYS21	Q12122	440 aa	Known RBP	3.68	□□□□□ -1.82
RPO21	YDL140C	RRP42	Q12277	265 aa	Predicted RBP	3.68	□□□□□ -1.82
RPO21	YDL140C	RPN6	Q12377	434 aa		3.68	□□□□□ -1.82
RPO21	YDL140C	PCT1	P13259	424 aa		3.68	□□□□□ -1.82
RPO21	YDL140C	NAM9	P27929	486 aa		3.68	□□□□□ -1.82
RPO21	YDL140C	YBR063C	P38083	404 aa		3.68	□□□□□ -1.82
RPO21	YDL140C	BCD1	P38772	366 aa		3.68	□□□□□ -1.82
RPO21	YDL140C	COG3	P40094	801 aa		3.68	□□□□□ -1.82
RPO21	YDL140C	LYS12	P40495	371 aa	Known RBP	3.68	□□□□□ -1.82
RPO21	YDL140C	LSG1	P53145	640 aa	Known RBP	3.68	□□□□□ -1.82
RPO21	YDL140C	HER2	Q03557	464 aa		3.68	□□□□□ -1.82
RPO21	YDL140C	ACL4	Q03771	387 aa		3.68	□□□□□ -1.82
RPO21	YDL140C	HPF1	Q05164	967 aa		3.68	□□□□□ -1.82
RPO21	YDL140C	PEX11	Q12462	236 aa		3.68	□□□□□ -1.82
RPO21	YDL140C	YKR051W	P36142	418 aa		3.67	□□□□□ -1.82
RPO21	YDL140C	BMT2	P38278	337 aa		3.67	□□□□□ -1.82
RPO21	YDL140C	LAG1	P38703	411 aa		3.67	□□□□□ -1.82
RPO21	YDL140C	ZRG8	P40021	1076 aa		3.67	□□□□□ -1.82
RPO21	YDL140C	SER33	P40510	469 aa		3.67	□□□□□ -1.82
RPO21	YDL140C	MTQ2	Q03920	221 aa	Predicted RBP	3.67	□□□□□ -1.82
RPO21	YDL140C	YDR344C	Q05510	147 aa		3.67	□□□□□ -1.82
RPO21	YDL140C	BUR2	Q05949	395 aa		3.67	□□□□□ -1.82
RPO21	YDL140C	YCL012C	Q8J0M4	134 aa		3.67	□□□□□ -1.82
RPO21	YDL140C	REP2	P03872	296 aa		3.67	□□□□□ -1.82
RPO21	YDL140C	PRP2	P20095	876 aa	Predicted RBP	3.67	□□□□□ -1.82
RPO21	YDL140C	ESS1	P22696	170 aa		3.67	□□□□□ -1.82
RPO21	YDL140C	SIS1	P25294	352 aa	Known RBP	3.67	□□□□□ -1.82
RPO21	YDL140C	HXT3	P32466	567 aa	Known RBP	3.67	□□□□□ -1.82
RPO21	YDL140C	ERP5	P38819	212 aa		3.67	□□□□□ -1.82
RPO21	YDL140C	RPH1	P39956	796 aa		3.67	□□□□□ -1.82
RPO21	YDL140C	YIL067C	P40514	678 aa		3.67	□□□□□ -1.82
RPO21	YDL140C	RRN7	P40992	514 aa		3.67	□□□□□ -1.82
RPO21	YDL140C	IDP2	P41939	412 aa		3.67	□□□□□ -1.82
RPO21	YDL140C	CTK2	P46962	323 aa		3.67	□□□□□ -1.82
RPO21	YDL140C	SNO2	P53823	222 aa		3.67	□□□□□ -1.82
RPO21	YDL140C	KAR5	Q04746	504 aa		3.67	□□□□□ -1.82
RPO21	YDL140C	YDL086W	Q07505	273 aa		3.67	□□□□□ -1.82
RPO21	YDL140C	RSC58	Q07979	502 aa		3.67	□□□□□ -1.82
RPO21	YDL140C	RSA1	Q08932	381 aa		3.67	□□□□□ -1.82
RPO21	YDL140C	YLR462W	O13556	202 aa		3.67	□□□□□ -1.82
RPO21	YDL140C	PUT4	P15380	627 aa		3.67	□□□□□ -1.82
RPO21	YDL140C	CKA1	P15790	372 aa		3.67	□□□□□ -1.82
RPO21	YDL140C	YHL049C	P38722	271 aa		3.67	□□□□□ -1.82
RPO21	YDL140C	DUN1	P39009	513 aa		3.67	□□□□□ -1.82
RPO21	YDL140C	YEL075C	P39972	122 aa		3.67	□□□□□ -1.82
RPO21	YDL140C	YER189W	P40104	122 aa		3.67	□□□□□ -1.82
RPO21	YDL140C	QDR2	P40474	542 aa		3.67	□□□□□ -1.82
RPO21	YDL140C	FIG4	P42837	879 aa		3.67	□□□□□ -1.82

Retrieved 100 of 5,963 RNA–protein pairs in 23.1 ms