RNA–Protein interactions for RNA: YDL088C

ASM4, Transcript of FG-nucleoporin component of central core of nuclear pore complex (NPC), yeastyeast

Gene ASM4, Length 1,587 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ASM4YDL088C CAF130P53280 1122 aaPredicted RBP2.46□□□□□ -2.02
ASM4YDL088C MEP3P53390 489 aa2.46□□□□□ -2.02
ASM4YDL088C PNG1Q02890 363 aa2.46□□□□□ -2.02
ASM4YDL088C RPC11Q04307 110 aaPredicted RBP2.46□□□□□ -2.02
ASM4YDL088C VPS38Q05919 439 aa2.46□□□□□ -2.02
ASM4YDL088C OPY2Q06810 360 aa2.46□□□□□ -2.02
ASM4YDL088C GAL80P04387 435 aa2.45□□□□□ -2.02
ASM4YDL088C SPS22P25380 463 aa2.45□□□□□ -2.02
ASM4YDL088C MIX23P38162 196 aa2.45□□□□□ -2.02
ASM4YDL088C PAN6P40459 309 aa2.45□□□□□ -2.02
ASM4YDL088C OCA1P50946 238 aaPredicted RBP2.45□□□□□ -2.02
ASM4YDL088C HAL1Q01766 294 aa2.45□□□□□ -2.02
ASM4YDL088C FIN1Q03898 291 aa2.45□□□□□ -2.02
ASM4YDL088C NMD4Q12129 218 aa2.45□□□□□ -2.02
ASM4YDL088C AVL9Q12500 764 aa2.45□□□□□ -2.02
ASM4YDL088C PCL1P24867 279 aa2.44□□□□□ -2.02
ASM4YDL088C PEP3P27801 918 aa2.44□□□□□ -2.02
ASM4YDL088C MUD2P36084 527 aaKnown RBP2.44□□□□□ -2.02
ASM4YDL088C RIB5P38145 238 aa2.44□□□□□ -2.02
ASM4YDL088C SGN1P40561 250 aaKnown RBP RIP-Chip data2.44□□□□□ -2.02not detected
ASM4YDL088C MDG1P53885 366 aa2.44□□□□□ -2.02
ASM4YDL088C YKU80Q04437 629 aa2.44□□□□□ -2.02
ASM4YDL088C YJR112W-AQ3E743 109 aa2.44□□□□□ -2.02
ASM4YDL088C YGR066CP53242 292 aa2.44□□□□□ -2.02
ASM4YDL088C MRP51Q02950 344 aa2.44□□□□□ -2.02
ASM4YDL088C HER2Q03557 464 aa2.44□□□□□ -2.02
ASM4YDL088C RCN2Q12044 265 aa2.44□□□□□ -2.02
ASM4YDL088C MNS1P32906 549 aa2.43□□□□□ -2.02
ASM4YDL088C LAM5P43560 674 aa2.43□□□□□ -2.02
ASM4YDL088C MFB1Q04922 465 aa2.43□□□□□ -2.02
ASM4YDL088C TRX2P22803 104 aaKnown RBP2.42□□□□□ -2.02
ASM4YDL088C PRD1P25375 712 aa2.42□□□□□ -2.02
ASM4YDL088C SSH4P32343 579 aa2.42□□□□□ -2.02
ASM4YDL088C YCR041WP37265 110 aa2.42□□□□□ -2.02
ASM4YDL088C SSN8P47821 323 aa2.42□□□□□ -2.02
ASM4YDL088C SOV1Q04748 898 aa2.42□□□□□ -2.02
ASM4YDL088C YLL032CQ07834 825 aaKnown RBP RIP-Chip data2.42□□□□□ -2.02not detected
ASM4YDL088C YDL012CQ12489 107 aa2.42□□□□□ -2.02
ASM4YDL088C ENT1Q12518 454 aa2.42□□□□□ -2.02
ASM4YDL088C MCM10P32354 571 aa2.41□□□□□ -2.02
ASM4YDL088C PAH1P32567 862 aa2.41□□□□□ -2.02
ASM4YDL088C WBP1P33767 430 aaKnown RBP2.41□□□□□ -2.02
ASM4YDL088C HCS1P34243 683 aa2.41□□□□□ -2.02
ASM4YDL088C MUM2P38236 366 aa2.41□□□□□ -2.02
ASM4YDL088C YBR225WP38321 900 aa2.41□□□□□ -2.02
ASM4YDL088C KEL1P38853 1164 aaKnown RBP2.41□□□□□ -2.02
ASM4YDL088C RSN1Q03516 953 aa2.41□□□□□ -2.02
ASM4YDL088C RPL31BP0C2H9 113 aaKnown RBP2.4□□□□□ -2.02
ASM4YDL088C CBS1P14066 229 aa2.4□□□□□ -2.02
ASM4YDL088C MRPL10P36520 322 aa2.4□□□□□ -2.02
ASM4YDL088C DOT5P40553 215 aa2.4□□□□□ -2.02
ASM4YDL088C TRS85P46944 698 aa2.4□□□□□ -2.02
ASM4YDL088C CWC25P53854 179 aaKnown RBP2.4□□□□□ -2.02
ASM4YDL088C PDS5Q04264 1277 aa2.4□□□□□ -2.02
ASM4YDL088C CTI6Q08923 506 aa2.4□□□□□ -2.02
ASM4YDL088C DPB3P27344 201 aa2.4□□□□□ -2.03
ASM4YDL088C MSG5P38590 489 aa2.4□□□□□ -2.03
ASM4YDL088C MST28P39552 234 aa2.4□□□□□ -2.03
ASM4YDL088C PCP1P53259 346 aa2.4□□□□□ -2.03
ASM4YDL088C SLG1P54867 378 aa2.4□□□□□ -2.03
ASM4YDL088C YDR239CQ03780 787 aa2.4□□□□□ -2.03
ASM4YDL088C PKH2Q12236 1081 aaKnown RBP2.4□□□□□ -2.03
ASM4YDL088C YDL007C-AQ2V2Q0 85 aa2.4□□□□□ -2.03
ASM4YDL088C RAD61Q99359 647 aa2.4□□□□□ -2.03
ASM4YDL088C RPS8AP0CX39 200 aaKnown RBP2.39□□□□□ -2.03
ASM4YDL088C RPS8BP0CX40 200 aaKnown RBP2.39□□□□□ -2.03
ASM4YDL088C REC114P32841 428 aa2.39□□□□□ -2.03
ASM4YDL088C MRP21P38175 177 aa2.39□□□□□ -2.03
ASM4YDL088C PET130P47065 347 aa2.39□□□□□ -2.03
ASM4YDL088C MRX6P48564 524 aa2.39□□□□□ -2.03
ASM4YDL088C YIP1P53039 248 aa2.39□□□□□ -2.03
ASM4YDL088C NCS2P53923 493 aaPredicted RBP2.39□□□□□ -2.03
ASM4YDL088C RNY1Q02933 434 aaKnown RBP2.39□□□□□ -2.03
ASM4YDL088C PPM1Q04081 328 aa2.39□□□□□ -2.03
ASM4YDL088C FOB1O13329 566 aa2.38□□□□□ -2.03
ASM4YDL088C TOP1P04786 769 aa2.38□□□□□ -2.03
ASM4YDL088C DFR1P07807 211 aaKnown RBP RIP-Chip data2.38□□□□□ -2.03not detected
ASM4YDL088C MID2P36027 376 aa2.38□□□□□ -2.03
ASM4YDL088C NOP4P37838 685 aaKnown RBP2.38□□□□□ -2.03
ASM4YDL088C YGL108CP53139 140 aa2.38□□□□□ -2.03
ASM4YDL088C DSL1P53847 754 aa2.38□□□□□ -2.03
ASM4YDL088C HXT11P54862 567 aa2.38□□□□□ -2.03
ASM4YDL088C TIM18Q08749 192 aa2.38□□□□□ -2.03
ASM4YDL088C TIP1P27654 210 aaPredicted RBP2.37□□□□□ -2.03
ASM4YDL088C CST26P38226 397 aa2.37□□□□□ -2.03
ASM4YDL088C TSA2Q04120 196 aa2.37□□□□□ -2.03
ASM4YDL088C YML133CQ03099 1374 aa2.36□□□□□ -2.03
ASM4YDL088C YLL067CQ07888 1374 aa2.36□□□□□ -2.03
ASM4YDL088C YLL066CQ99208 1374 aa2.36□□□□□ -2.03
ASM4YDL088C SEM1O94742 89 aa2.36□□□□□ -2.03
ASM4YDL088C TRP1P00912 224 aa2.36□□□□□ -2.03
ASM4YDL088C NFT1P0CE68 1218 aa2.36□□□□□ -2.03
ASM4YDL088C ATP10P18496 279 aa2.36□□□□□ -2.03
ASM4YDL088C SLY1P22213 666 aa2.36□□□□□ -2.03
ASM4YDL088C AFG1P32317 509 aa2.36□□□□□ -2.03
ASM4YDL088C MRE11P32829 692 aa2.36□□□□□ -2.03
ASM4YDL088C YMR147WP40218 223 aaKnown RBP2.36□□□□□ -2.03
ASM4YDL088C MTM1P53320 366 aa2.36□□□□□ -2.03
ASM4YDL088C IRC25Q07951 179 aa2.36□□□□□ -2.03
ASM4YDL088C YPR022CQ12139 1133 aa2.36□□□□□ -2.03
Retrieved 100 of 5,963 RNA–protein pairs in 23.5 ms