RNA–Protein interactions for RNA: YDL084W

SUB2, Transcript of Component of the TREX complex required for nuclear mRNA export, yeast

Gene SUB2, Length 1,341 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SUB2	YDL084W	TY2B-OR1	Q12113	1770 aa		5.66	□□□□□ -1.5
SUB2	YDL084W	TY2B-DR1	Q12472	1770 aa		5.66	□□□□□ -1.5
SUB2	YDL084W	TY2B-B	Q12491	1770 aa		5.66	□□□□□ -1.5
SUB2	YDL084W	TY2B-OR2	Q12501	1770 aa		5.66	□□□□□ -1.5
SUB2	YDL084W	TY1B-DR3	Q99231	1755 aa		5.66	□□□□□ -1.5
SUB2	YDL084W	ARG4	P04076	463 aa	Predicted RBP	5.66	□□□□□ -1.5
SUB2	YDL084W	NFT1	P0CE68	1218 aa		5.66	□□□□□ -1.5
SUB2	YDL084W	MRP2	P10663	115 aa	Predicted RBP	5.66	□□□□□ -1.5
SUB2	YDL084W	NHP6B	P11633	99 aa	Known RBP	5.66	□□□□□ -1.5
SUB2	YDL084W	HXT2	P23585	541 aa		5.66	□□□□□ -1.5
SUB2	YDL084W	HCM1	P25364	564 aa		5.66	□□□□□ -1.5
SUB2	YDL084W	IDH2	P28241	369 aa	Known RBP	5.66	□□□□□ -1.5
SUB2	YDL084W	TRK2	P28584	889 aa		5.66	□□□□□ -1.5
SUB2	YDL084W	SEC65	P29478	273 aa		5.66	□□□□□ -1.5
SUB2	YDL084W	MCM4	P30665	933 aa	Known RBP	5.66	□□□□□ -1.5
SUB2	YDL084W	TFC1	P32367	649 aa		5.66	□□□□□ -1.5
SUB2	YDL084W	LIP5	P32875	414 aa		5.66	□□□□□ -1.5
SUB2	YDL084W	RPS1A	P33442	255 aa	Known RBP	5.66	□□□□□ -1.5
SUB2	YDL084W	YBL055C	P34220	418 aa	Predicted RBP	5.66	□□□□□ -1.5
SUB2	YDL084W	YKL070W	P36087	169 aa		5.66	□□□□□ -1.5
SUB2	YDL084W	NAT2	P37293	288 aa		5.66	□□□□□ -1.5
SUB2	YDL084W	RIB5	P38145	238 aa		5.66	□□□□□ -1.5
SUB2	YDL084W	YBR259W	P38338	688 aa		5.66	□□□□□ -1.5
SUB2	YDL084W	NVJ1	P38881	321 aa		5.66	□□□□□ -1.5
SUB2	YDL084W	CCT2	P39076	527 aa	Known RBP	5.66	□□□□□ -1.5
SUB2	YDL084W	GDH3	P39708	457 aa		5.66	□□□□□ -1.5
SUB2	YDL084W	AFG3	P39925	761 aa		5.66	□□□□□ -1.5
SUB2	YDL084W	AST2	P39945	430 aa	Known RBP	5.66	□□□□□ -1.5
SUB2	YDL084W	RMD6	P39975	231 aa		5.66	□□□□□ -1.5
SUB2	YDL084W	YEL025C	P39991	1188 aa		5.66	□□□□□ -1.5
SUB2	YDL084W	VRG4	P40107	337 aa		5.66	□□□□□ -1.5
SUB2	YDL084W	GTT1	P40582	234 aa		5.66	□□□□□ -1.5
SUB2	YDL084W	YFL052W	P43551	465 aa		5.66	□□□□□ -1.5
SUB2	YDL084W	FMP32	P43557	207 aa		5.66	□□□□□ -1.5
SUB2	YDL084W	YJR115W	P47152	169 aa		5.66	□□□□□ -1.5
SUB2	YDL084W	AQR1	P53943	586 aa		5.66	□□□□□ -1.5
SUB2	YDL084W	DID2	P69771	204 aa		5.66	□□□□□ -1.5
SUB2	YDL084W	SAE3	P89114	91 aa		5.66	□□□□□ -1.5
SUB2	YDL084W	TMA20	P89886	181 aa	Predicted RBP	5.66	□□□□□ -1.5
SUB2	YDL084W	GPD1	Q00055	391 aa	Known RBP	5.66	□□□□□ -1.5
SUB2	YDL084W	EFR3	Q03653	782 aa	Known RBP	5.66	□□□□□ -1.5
SUB2	YDL084W	ARX1	Q03862	593 aa	Known RBP	5.66	□□□□□ -1.5
SUB2	YDL084W	CSN9	Q03981	162 aa		5.66	□□□□□ -1.5
SUB2	YDL084W	TIF35	Q04067	274 aa	Known RBP	5.66	□□□□□ -1.5
SUB2	YDL084W	CDC123	Q05791	360 aa		5.66	□□□□□ -1.5
SUB2	YDL084W	ADY4	Q05955	493 aa		5.66	□□□□□ -1.5
SUB2	YDL084W	LDB18	Q07887	179 aa		5.66	□□□□□ -1.5
SUB2	YDL084W	FMP25	Q08023	583 aa		5.66	□□□□□ -1.5
SUB2	YDL084W	ZEO1	Q08245	113 aa		5.66	□□□□□ -1.5
SUB2	YDL084W	YTM1	Q12024	460 aa	Predicted RBP	5.66	□□□□□ -1.5
SUB2	YDL084W	MLH3	Q12083	715 aa		5.66	□□□□□ -1.5
SUB2	YDL084W	SWT1	Q12104	458 aa		5.66	□□□□□ -1.5
SUB2	YDL084W	PTC5	Q12511	572 aa		5.66	□□□□□ -1.5
SUB2	YDL084W	LEU2	P04173	364 aa	Predicted RBP	5.65	□□□□□ -1.51
SUB2	YDL084W	ADE5,7	P07244	802 aa	Known RBP	5.65	□□□□□ -1.51
SUB2	YDL084W	ILV2	P07342	687 aa	Known RBP	5.65	□□□□□ -1.51
SUB2	YDL084W	SWI5	P08153	709 aa		5.65	□□□□□ -1.51
SUB2	YDL084W	SBP1	P10080	294 aa	Known RBP	5.65	□□□□□ -1.51
SUB2	YDL084W	INO1	P11986	533 aa		5.65	□□□□□ -1.51
SUB2	YDL084W	ARO3	P14843	370 aa	Known RBP	5.65	□□□□□ -1.51
SUB2	YDL084W	CBS2	P14905	389 aa		5.65	□□□□□ -1.51
SUB2	YDL084W	RNA14	P25298	677 aa	Known RBP	5.65	□□□□□ -1.51
SUB2	YDL084W	DCC1	P25559	380 aa		5.65	□□□□□ -1.51
SUB2	YDL084W	ADY2	P25613	283 aa		5.65	□□□□□ -1.51
SUB2	YDL084W	HEM12	P32347	362 aa	Predicted RBP	5.65	□□□□□ -1.51
SUB2	YDL084W	SIP1	P32578	815 aa		5.65	□□□□□ -1.51
SUB2	YDL084W	OAF3	P36023	863 aa		5.65	□□□□□ -1.51
SUB2	YDL084W	BIT2	P38346	545 aa		5.65	□□□□□ -1.51
SUB2	YDL084W	AXL2	P38928	823 aa		5.65	□□□□□ -1.51
SUB2	YDL084W	PRP39	P39682	629 aa	Known RBP	5.65	□□□□□ -1.51
SUB2	YDL084W	SAD1	P43589	448 aa		5.65	□□□□□ -1.51
SUB2	YDL084W	IRC5	P43610	853 aa		5.65	□□□□□ -1.51
SUB2	YDL084W	NMD5	P46970	1048 aa		5.65	□□□□□ -1.51
SUB2	YDL084W	YJL132W	P47014	750 aa		5.65	□□□□□ -1.51
SUB2	YDL084W	ALY2	P47029	1046 aa		5.65	□□□□□ -1.51
SUB2	YDL084W	COS5	P47187	383 aa		5.65	□□□□□ -1.51
SUB2	YDL084W	ORC5	P50874	479 aa		5.65	□□□□□ -1.51
SUB2	YDL084W	ALT2	P52892	507 aa		5.65	□□□□□ -1.51
SUB2	YDL084W	ACS2	P52910	683 aa	Known RBP	5.65	□□□□□ -1.51
SUB2	YDL084W	BUD17	P53727	317 aa		5.65	□□□□□ -1.51
SUB2	YDL084W	COS1	P53822	381 aa		5.65	□□□□□ -1.51
SUB2	YDL084W	RNY1	Q02933	434 aa	Known RBP	5.65	□□□□□ -1.51
SUB2	YDL084W	SOV1	Q04748	898 aa		5.65	□□□□□ -1.51
SUB2	YDL084W	NEJ1	Q06148	342 aa		5.65	□□□□□ -1.51
SUB2	YDL084W	CTS2	Q06350	511 aa		5.65	□□□□□ -1.51
SUB2	YDL084W	YOR214C	Q12282	236 aa		5.65	□□□□□ -1.51
SUB2	YDL084W	KCS1	Q12494	1050 aa		5.65	□□□□□ -1.51
SUB2	YDL084W	PDR10	P51533	1564 aa		5.65	□□□□□ -1.51
SUB2	YDL084W	PRC1	P00729	532 aa		5.64	□□□□□ -1.51
SUB2	YDL084W	TRP4	P07285	380 aa	Predicted RBP	5.64	□□□□□ -1.51
SUB2	YDL084W	ABF1	P14164	731 aa		5.64	□□□□□ -1.51
SUB2	YDL084W	STF2	P16965	84 aa		5.64	□□□□□ -1.51
SUB2	YDL084W	RRT12	P25381	491 aa		5.64	□□□□□ -1.51
SUB2	YDL084W	PBN1	P25580	416 aa		5.64	□□□□□ -1.51
SUB2	YDL084W	CPR3	P25719	182 aa		5.64	□□□□□ -1.51
SUB2	YDL084W	PDC6	P26263	563 aa	Known RBP	5.64	□□□□□ -1.51
SUB2	YDL084W	ADE1	P27616	306 aa		5.64	□□□□□ -1.51
SUB2	YDL084W	PEX3	P28795	441 aa		5.64	□□□□□ -1.51
SUB2	YDL084W	BEM1	P29366	551 aa		5.64	□□□□□ -1.51
SUB2	YDL084W	FAA1	P30624	700 aa	Known RBP	5.64	□□□□□ -1.51

Retrieved 100 of 5,963 RNA–protein pairs in 14.9 ms