RNA–Protein interactions for RNA: YCR084C

TUP1, Transcript of General repressor of transcription, yeast

Gene TUP1, Length 2,142 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TUP1	YCR084C	ECM9	Q02202	377 aa		4.95	□□□□□ -1.62
TUP1	YCR084C	EFR3	Q03653	782 aa	Known RBP	4.95	□□□□□ -1.62
TUP1	YCR084C	SKY1	Q03656	742 aa		4.95	□□□□□ -1.62
TUP1	YCR084C	FMN1	Q03778	218 aa		4.95	□□□□□ -1.62
TUP1	YCR084C	YLR031W	Q07978	186 aa		4.95	□□□□□ -1.62
TUP1	YCR084C	OXR1	Q08952	273 aa		4.95	□□□□□ -1.62
TUP1	YCR084C	YPL066W	Q12194	479 aa		4.95	□□□□□ -1.62
TUP1	YCR084C	TUB1	P09733	447 aa	Known RBP	4.94	□□□□□ -1.62
TUP1	YCR084C	PEP5	P12868	1029 aa		4.94	□□□□□ -1.62
TUP1	YCR084C	CBF1	P17106	351 aa		4.94	□□□□□ -1.62
TUP1	YCR084C	AAT2	P23542	418 aa	Known RBP	4.94	□□□□□ -1.62
TUP1	YCR084C	MRPL32	P25348	183 aa		4.94	□□□□□ -1.62
TUP1	YCR084C	YCL068C	P25593	260 aa		4.94	□□□□□ -1.62
TUP1	YCR084C	ACH1	P32316	526 aa		4.94	□□□□□ -1.62
TUP1	YCR084C	ABD1	P32783	436 aa	Predicted RBP	4.94	□□□□□ -1.62
TUP1	YCR084C	UGA4	P32837	571 aa		4.94	□□□□□ -1.62
TUP1	YCR084C	GEX2	P36173	615 aa		4.94	□□□□□ -1.62
TUP1	YCR084C	MRPL7	P36519	292 aa		4.94	□□□□□ -1.62
TUP1	YCR084C	PDX3	P38075	228 aa	Known RBP	4.94	□□□□□ -1.62
TUP1	YCR084C	MSC7	P38694	644 aa		4.94	□□□□□ -1.62
TUP1	YCR084C	LSM12	P38828	187 aa	Known RBP	4.94	□□□□□ -1.62
TUP1	YCR084C	ALG8	P40351	577 aa		4.94	□□□□□ -1.62
TUP1	YCR084C	HXT14	P42833	540 aa		4.94	□□□□□ -1.62
TUP1	YCR084C	IRC5	P43610	853 aa		4.94	□□□□□ -1.62
TUP1	YCR084C	YJR141W	P47172	347 aa	Predicted RBP	4.94	□□□□□ -1.62
TUP1	YCR084C	ASK10	P48361	1146 aa		4.94	□□□□□ -1.62
TUP1	YCR084C	PSP1	P50896	841 aa	Known RBP	4.94	□□□□□ -1.62
TUP1	YCR084C	YGL185C	P53100	379 aa		4.94	□□□□□ -1.62
TUP1	YCR084C	YGR066C	P53242	292 aa		4.94	□□□□□ -1.62
TUP1	YCR084C	OGG1	P53397	376 aa	Predicted RBP	4.94	□□□□□ -1.62
TUP1	YCR084C	YNL115C	P53925	644 aa		4.94	□□□□□ -1.62
TUP1	YCR084C	CTF19	Q02732	369 aa		4.94	□□□□□ -1.62
TUP1	YCR084C	RIM13	Q03792	727 aa		4.94	□□□□□ -1.62
TUP1	YCR084C	AIM33	Q04516	312 aa		4.94	□□□□□ -1.62
TUP1	YCR084C	CDA2	Q06703	312 aa		4.94	□□□□□ -1.62
TUP1	YCR084C	YLR040C	Q07988	224 aa		4.94	□□□□□ -1.62
TUP1	YCR084C	SAM3	Q08986	587 aa		4.94	□□□□□ -1.62
TUP1	YCR084C	BAG7	Q12128	409 aa		4.94	□□□□□ -1.62
TUP1	YCR084C	FKS3	Q04952	1785 aa		4.94	□□□□□ -1.62
TUP1	YCR084C	MF(ALPHA)1	P01149	165 aa		4.94	□□□□□ -1.62
TUP1	YCR084C	YER152C	P10356	443 aa		4.94	□□□□□ -1.62
TUP1	YCR084C	CBS2	P14905	389 aa		4.94	□□□□□ -1.62
TUP1	YCR084C	PDC5	P16467	563 aa	Known RBP	4.94	□□□□□ -1.62
TUP1	YCR084C	EXO70	P19658	623 aa		4.94	□□□□□ -1.62
TUP1	YCR084C	CPR2	P23285	205 aa		4.94	□□□□□ -1.62
TUP1	YCR084C	SNT1	P25357	1226 aa		4.94	□□□□□ -1.62
TUP1	YCR084C	AAR2	P32357	355 aa	Predicted RBP	4.94	□□□□□ -1.62
TUP1	YCR084C	ATP11	P32453	318 aa		4.94	□□□□□ -1.62
TUP1	YCR084C	MYO3	P36006	1272 aa		4.94	□□□□□ -1.62
TUP1	YCR084C	GIP1	P38229	639 aa		4.94	□□□□□ -1.62
TUP1	YCR084C	SPC97	P38863	823 aa		4.94	□□□□□ -1.62
TUP1	YCR084C	YEL057C	P39983	233 aa		4.94	□□□□□ -1.62
TUP1	YCR084C	PUG1	P40100	303 aa		4.94	□□□□□ -1.62
TUP1	YCR084C	FMP32	P43557	207 aa		4.94	□□□□□ -1.62
TUP1	YCR084C	PKP2	P53170	491 aa		4.94	□□□□□ -1.62
TUP1	YCR084C	NOP13	P53883	403 aa	Known RBP RIP-Chip data	4.94	□□□□□ -1.62	not detected
TUP1	YCR084C	MRP51	Q02950	344 aa		4.94	□□□□□ -1.62
TUP1	YCR084C	DIS3	Q08162	1001 aa	Known RBP	4.94	□□□□□ -1.62
TUP1	YCR084C	RDR1	Q08904	546 aa		4.94	□□□□□ -1.62
TUP1	YCR084C	CSM4	Q08955	156 aa		4.94	□□□□□ -1.62
TUP1	YCR084C	HUA2	Q12134	243 aa		4.94	□□□□□ -1.62
TUP1	YCR084C	HBN1	Q96VH4	193 aa		4.94	□□□□□ -1.62
TUP1	YCR084C	AI5_BETA	Q9ZZX0	354 aa		4.94	□□□□□ -1.62
TUP1	YCR084C	RPS21A	P0C0V8	87 aa	Known RBP	4.93	□□□□□ -1.62
TUP1	YCR084C	RAM1	P22007	431 aa		4.93	□□□□□ -1.62
TUP1	YCR084C	VMA16	P23968	213 aa		4.93	□□□□□ -1.62
TUP1	YCR084C	TCA17	P32613	152 aa		4.93	□□□□□ -1.62
TUP1	YCR084C	HBS1	P32769	611 aa	Known RBP	4.93	□□□□□ -1.62
TUP1	YCR084C	TRM2	P33753	639 aa		4.93	□□□□□ -1.62
TUP1	YCR084C	KKQ8	P36004	724 aa		4.93	□□□□□ -1.62
TUP1	YCR084C	NTR2	P36118	322 aa	Predicted RBP	4.93	□□□□□ -1.62
TUP1	YCR084C	ETR1	P38071	380 aa		4.93	□□□□□ -1.62
TUP1	YCR084C	MAP2	P38174	421 aa	Known RBP	4.93	□□□□□ -1.62
TUP1	YCR084C	POA1	P38218	177 aa		4.93	□□□□□ -1.62
TUP1	YCR084C	FAT1	P38225	669 aa		4.93	□□□□□ -1.62
TUP1	YCR084C	VHC1	P38329	1120 aa		4.93	□□□□□ -1.62
TUP1	YCR084C	CCT6	P39079	546 aa		4.93	□□□□□ -1.62
TUP1	YCR084C	ICP55	P40051	511 aa		4.93	□□□□□ -1.62
TUP1	YCR084C	DSE1	P40077	573 aa		4.93	□□□□□ -1.62
TUP1	YCR084C	ELP2	P42935	788 aa		4.93	□□□□□ -1.62
TUP1	YCR084C	ALR2	P43553	858 aa		4.93	□□□□□ -1.62
TUP1	YCR084C	YNL181W	P53878	407 aa		4.93	□□□□□ -1.62
TUP1	YCR084C	MRPL13	Q02204	264 aa		4.93	□□□□□ -1.62
TUP1	YCR084C	UBP16	Q02863	499 aa		4.93	□□□□□ -1.62
TUP1	YCR084C	ARX1	Q03862	593 aa	Known RBP	4.93	□□□□□ -1.62
TUP1	YCR084C	SNO4	Q04902	237 aa		4.93	□□□□□ -1.62
TUP1	YCR084C	YDR222W	Q04925	415 aa		4.93	□□□□□ -1.62
TUP1	YCR084C	GLO2	Q05584	274 aa		4.93	□□□□□ -1.62
TUP1	YCR084C	HSP33	Q08914	237 aa	Known RBP	4.93	□□□□□ -1.62
TUP1	YCR084C	HSP32	Q08992	237 aa		4.93	□□□□□ -1.62
TUP1	YCR084C	YPR202W	Q08993	238 aa		4.93	□□□□□ -1.62
TUP1	YCR084C	ATG31	Q12421	196 aa		4.93	□□□□□ -1.62
TUP1	YCR084C	WIP1	Q2V2P8	89 aa		4.93	□□□□□ -1.62
TUP1	YCR084C	VPS63	O13549	108 aa		4.93	□□□□□ -1.62
TUP1	YCR084C	RPN13	O13563	156 aa		4.93	□□□□□ -1.62
TUP1	YCR084C	GLN4	P13188	809 aa	Known RBP	4.93	□□□□□ -1.62
TUP1	YCR084C	VPS34	P22543	875 aa		4.93	□□□□□ -1.62
TUP1	YCR084C	YCP4	P25349	247 aa	Known RBP	4.93	□□□□□ -1.62
TUP1	YCR084C	ERV1	P27882	189 aa		4.93	□□□□□ -1.62
TUP1	YCR084C	PTK1	P36002	662 aa	Predicted RBP	4.93	□□□□□ -1.62

Retrieved 100 of 5,963 RNA–protein pairs in 55.2 ms