RNA–Protein interactions for RNA: YBR228W

SLX1, Transcript of Endonuclease involved in DNA recombination and repair, yeast

Gene SLX1, Length 915 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SLX1	YBR228W	RAD57	P25301	460 aa		4.27	□□□□□ -1.73
SLX1	YBR228W	DAL2	P25335	343 aa		4.27	□□□□□ -1.73
SLX1	YBR228W	RSA4	P25382	515 aa	Known RBP	4.27	□□□□□ -1.73
SLX1	YBR228W	CSE2	P33308	149 aa		4.27	□□□□□ -1.73
SLX1	YBR228W	CSG2	P35206	410 aa		4.27	□□□□□ -1.73
SLX1	YBR228W	YHR054C	P38780	354 aa		4.27	□□□□□ -1.73
SLX1	YBR228W	SEC9	P40357	651 aa		4.27	□□□□□ -1.73
SLX1	YBR228W	YJL068C	P40363	299 aa		4.27	□□□□□ -1.73
SLX1	YBR228W	ESL1	P40456	1118 aa		4.27	□□□□□ -1.73
SLX1	YBR228W	EFM4	P40516	257 aa		4.27	□□□□□ -1.73
SLX1	YBR228W	ALT2	P52892	507 aa		4.27	□□□□□ -1.73
SLX1	YBR228W	CDD1	Q06549	142 aa		4.27	□□□□□ -1.73
SLX1	YBR228W	OPY2	Q06810	360 aa		4.27	□□□□□ -1.73
SLX1	YBR228W	TSR1	Q07381	788 aa	Known RBP	4.27	□□□□□ -1.73
SLX1	YBR228W	DNL4	Q08387	944 aa	Predicted RBP	4.27	□□□□□ -1.73
SLX1	YBR228W	YBR298C-A	Q8TGK4	73 aa		4.27	□□□□□ -1.73
SLX1	YBR228W	AI5_BETA	Q9ZZX0	354 aa		4.27	□□□□□ -1.73
SLX1	YBR228W	ATP4	P05626	244 aa		4.26	□□□□□ -1.73
SLX1	YBR228W	SNF1	P06782	633 aa	Known RBP	4.26	□□□□□ -1.73
SLX1	YBR228W	TY2A-LR1	P0C2J4	438 aa		4.26	□□□□□ -1.73
SLX1	YBR228W	TY2A-F	P0CX61	438 aa		4.26	□□□□□ -1.73
SLX1	YBR228W	TY2A-GR2	P0CX62	438 aa		4.26	□□□□□ -1.73
SLX1	YBR228W	PHO81	P17442	1178 aa		4.26	□□□□□ -1.73
SLX1	YBR228W	TY2A-C	P25383	438 aa		4.26	□□□□□ -1.73
SLX1	YBR228W	TFC3	P34111	1160 aa		4.26	□□□□□ -1.73
SLX1	YBR228W	YKL050C	P35736	922 aa		4.26	□□□□□ -1.73
SLX1	YBR228W	HEL1	P36113	551 aa		4.26	□□□□□ -1.73
SLX1	YBR228W	KAP123	P40069	1113 aa	Known RBP	4.26	□□□□□ -1.73
SLX1	YBR228W	YIL060W	P40519	144 aa		4.26	□□□□□ -1.73
SLX1	YBR228W	APT1	P49435	187 aa	Known RBP	4.26	□□□□□ -1.73
SLX1	YBR228W	DRN1	P53255	507 aa	Known RBP	4.26	□□□□□ -1.73
SLX1	YBR228W	TY2A-DR2	Q03483	438 aa		4.26	□□□□□ -1.73
SLX1	YBR228W	SOV1	Q04748	898 aa		4.26	□□□□□ -1.73
SLX1	YBR228W	SIL1	Q08199	421 aa		4.26	□□□□□ -1.73
SLX1	YBR228W	TY2A-B	Q12260	438 aa		4.26	□□□□□ -1.73
SLX1	YBR228W	TY2A-OR2	Q12293	438 aa		4.26	□□□□□ -1.73
SLX1	YBR228W	TY2A-DR1	Q12392	438 aa		4.26	□□□□□ -1.73
SLX1	YBR228W	TY2A-OR1	Q12439	438 aa		4.26	□□□□□ -1.73
SLX1	YBR228W	CTF3	Q12748	733 aa		4.26	□□□□□ -1.73
SLX1	YBR228W	TY2A-DR3	Q99303	438 aa		4.26	□□□□□ -1.73
SLX1	YBR228W	RPS3	P05750	240 aa	Known RBP	4.25	□□□□□ -1.73
SLX1	YBR228W	CHS1	P08004	1131 aa		4.25	□□□□□ -1.73
SLX1	YBR228W	NCP1	P16603	691 aa	Known RBP	4.25	□□□□□ -1.73
SLX1	YBR228W	PET123	P17558	318 aa		4.25	□□□□□ -1.73
SLX1	YBR228W	CPR3	P25719	182 aa		4.25	□□□□□ -1.73
SLX1	YBR228W	HXT1	P32465	570 aa		4.25	□□□□□ -1.73
SLX1	YBR228W	AGP2	P38090	596 aa		4.25	□□□□□ -1.73
SLX1	YBR228W	SLX1	P38324	304 aa		4.25	□□□□□ -1.73
SLX1	YBR228W	YHL041W	P38730	149 aa		4.25	□□□□□ -1.73
SLX1	YBR228W	TCD1	P38756	429 aa		4.25	□□□□□ -1.73
SLX1	YBR228W	CAJ1	P39101	391 aa		4.25	□□□□□ -1.73
SLX1	YBR228W	YTA12	P40341	825 aa		4.25	□□□□□ -1.73
SLX1	YBR228W	PHO86	P46956	311 aa		4.25	□□□□□ -1.73
SLX1	YBR228W	YGR021W	P53212	290 aa		4.25	□□□□□ -1.73
SLX1	YBR228W	YMR178W	Q03219	274 aa	Known RBP	4.25	□□□□□ -1.73
SLX1	YBR228W	RSA1	Q08932	381 aa		4.25	□□□□□ -1.73
SLX1	YBR228W	PPT2	Q12036	173 aa		4.25	□□□□□ -1.73
SLX1	YBR228W	DAS2	Q12084	232 aa		4.25	□□□□□ -1.73
SLX1	YBR228W	HIP1	P06775	603 aa		4.24	□□□□□ -1.73
SLX1	YBR228W	SAN1	P22470	610 aa		4.24	□□□□□ -1.73
SLX1	YBR228W	EFB1	P32471	206 aa	Known RBP	4.24	□□□□□ -1.73
SLX1	YBR228W	SRB5	P32585	307 aa		4.24	□□□□□ -1.73
SLX1	YBR228W	YJR054W	P47114	497 aa		4.24	□□□□□ -1.73
SLX1	YBR228W	CSL4	P53859	292 aa	Predicted RBP	4.24	□□□□□ -1.73
SLX1	YBR228W	NOP13	P53883	403 aa	Known RBP RIP-Chip data	4.24	□□□□□ -1.73	not detected
SLX1	YBR228W	SML1	Q04964	104 aa		4.24	□□□□□ -1.73
SLX1	YBR228W	VAC14	Q06708	880 aa		4.24	□□□□□ -1.73
SLX1	YBR228W	PKH2	Q12236	1081 aa	Known RBP	4.24	□□□□□ -1.73
SLX1	YBR228W	GAL80	P04387	435 aa		4.23	□□□□□ -1.73
SLX1	YBR228W	CKI1	P20485	582 aa		4.23	□□□□□ -1.73
SLX1	YBR228W	VPS3	P23643	1011 aa		4.23	□□□□□ -1.73
SLX1	YBR228W	ADK2	P26364	225 aa		4.23	□□□□□ -1.73
SLX1	YBR228W	ERG1	P32476	496 aa	Known RBP	4.23	□□□□□ -1.73
SLX1	YBR228W	SRB4	P32569	687 aa		4.23	□□□□□ -1.73
SLX1	YBR228W	GYP6	P32806	458 aa		4.23	□□□□□ -1.73
SLX1	YBR228W	BLI1	P35727	113 aa		4.23	□□□□□ -1.73
SLX1	YBR228W	RRP3	P38712	501 aa	Known RBP	4.23	□□□□□ -1.73
SLX1	YBR228W	YJR061W	P40355	935 aa		4.23	□□□□□ -1.73
SLX1	YBR228W	KAP114	P53067	1004 aa		4.23	□□□□□ -1.73
SLX1	YBR228W	YGR111W	P53265	400 aa		4.23	□□□□□ -1.73
SLX1	YBR228W	BTN2	P53286	410 aa		4.23	□□□□□ -1.73
SLX1	YBR228W	NUP100	Q02629	959 aa		4.23	□□□□□ -1.73
SLX1	YBR228W	NGL3	Q03210	505 aa		4.23	□□□□□ -1.73
SLX1	YBR228W	MZM1	Q03429	123 aa	Predicted RBP	4.23	□□□□□ -1.73
SLX1	YBR228W	YMR018W	Q04364	514 aa		4.23	□□□□□ -1.73
SLX1	YBR228W	YDR222W	Q04925	415 aa		4.23	□□□□□ -1.73
SLX1	YBR228W	HAP2	P06774	265 aa		4.22	□□□□□ -1.73
SLX1	YBR228W	BUD14	P27637	709 aa		4.22	□□□□□ -1.73
SLX1	YBR228W	GAC1	P28006	793 aa		4.22	□□□□□ -1.73
SLX1	YBR228W	PAP1	P29468	568 aa	Known RBP	4.22	□□□□□ -1.73
SLX1	YBR228W	FRE1	P32791	686 aa		4.22	□□□□□ -1.73
SLX1	YBR228W	MRP4	P32902	394 aa		4.22	□□□□□ -1.73
SLX1	YBR228W	KDX1	P36005	433 aa		4.22	□□□□□ -1.73
SLX1	YBR228W	NOP4	P37838	685 aa	Known RBP	4.22	□□□□□ -1.73
SLX1	YBR228W	HMT1	P38074	348 aa		4.22	□□□□□ -1.73
SLX1	YBR228W	YHR218W	P38899	603 aa		4.22	□□□□□ -1.73
SLX1	YBR228W	YEL075C	P39972	122 aa		4.22	□□□□□ -1.73
SLX1	YBR228W	DSE1	P40077	573 aa		4.22	□□□□□ -1.73
SLX1	YBR228W	PFK26	P40433	827 aa	Known RBP	4.22	□□□□□ -1.73
SLX1	YBR228W	ASG7	P46993	209 aa		4.22	□□□□□ -1.73

Retrieved 100 of 5,963 RNA–protein pairs in 20 ms