RNA–Protein interactions for RNA: YBR135W

CKS1, Transcript of Cyclin-dependent protein kinase regulatory subunit and adaptor, yeastyeast

Gene CKS1, Length 453 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CKS1YBR135W ROY1Q04847 553 aa4.75□□□□□ -1.65
CKS1YBR135W DSE3Q08729 430 aa4.75□□□□□ -1.65
CKS1YBR135W ISA2Q12425 185 aa4.75□□□□□ -1.65
CKS1YBR135W BRR1Q99177 341 aaPredicted RBP4.75□□□□□ -1.65
CKS1YBR135W SPS4P09937 338 aa4.74□□□□□ -1.65
CKS1YBR135W BAR1P12630 587 aa4.74□□□□□ -1.65
CKS1YBR135W TYR1P20049 452 aa4.74□□□□□ -1.65
CKS1YBR135W CLB1P24868 471 aa4.74□□□□□ -1.65
CKS1YBR135W IDH2P28241 369 aaKnown RBP4.74□□□□□ -1.65
CKS1YBR135W YER130CP39959 443 aa4.74□□□□□ -1.65
CKS1YBR135W YMR147WP40218 223 aaKnown RBP4.74□□□□□ -1.65
CKS1YBR135W YGR149WP48236 432 aa4.74□□□□□ -1.65
CKS1YBR135W ZPR1P53303 486 aaKnown RBP4.74□□□□□ -1.65
CKS1YBR135W SCW4P53334 386 aaKnown RBP4.74□□□□□ -1.65
CKS1YBR135W MSS11Q03825 758 aa4.74□□□□□ -1.65
CKS1YBR135W SOV1Q04748 898 aa4.74□□□□□ -1.65
CKS1YBR135W YMR254CQ04838 102 aa4.74□□□□□ -1.65
CKS1YBR135W NUP192P47054 1683 aa4.73□□□□□ -1.65
CKS1YBR135W RHO2P06781 192 aa4.73□□□□□ -1.65
CKS1YBR135W APE1P14904 514 aa4.73□□□□□ -1.65
CKS1YBR135W YIM1P28625 365 aa4.73□□□□□ -1.65
CKS1YBR135W ATP11P32453 318 aa4.73□□□□□ -1.65
CKS1YBR135W GUF1P46943 645 aa4.73□□□□□ -1.65
CKS1YBR135W KAP120Q02932 1032 aa4.73□□□□□ -1.65
CKS1YBR135W THI20Q08224 551 aa4.73□□□□□ -1.65
CKS1YBR135W GEP3Q08622 556 aa4.73□□□□□ -1.65
CKS1YBR135W SNU66Q12420 587 aaPredicted RBP4.73□□□□□ -1.65
CKS1YBR135W RRD2Q12461 358 aa4.73□□□□□ -1.65
CKS1YBR135W AFI1Q99222 893 aa4.73□□□□□ -1.65
CKS1YBR135W AFG1P32317 509 aa4.72□□□□□ -1.65
CKS1YBR135W YME2P32843 850 aa4.72□□□□□ -1.65
CKS1YBR135W ATO2P32907 282 aa4.72□□□□□ -1.65
CKS1YBR135W PEX5P35056 612 aa4.72□□□□□ -1.65
CKS1YBR135W OCA1P50946 238 aaPredicted RBP4.72□□□□□ -1.65
CKS1YBR135W SAM50P53969 484 aa4.72□□□□□ -1.65
CKS1YBR135W SMA1Q02651 245 aa4.72□□□□□ -1.65
CKS1YBR135W YML122CQ03207 126 aa4.72□□□□□ -1.65
CKS1YBR135W AIM32Q04689 311 aa4.72□□□□□ -1.65
CKS1YBR135W SIL1Q08199 421 aa4.72□□□□□ -1.65
CKS1YBR135W YCR007CP25354 239 aa4.71□□□□□ -1.66
CKS1YBR135W ACH1P32316 526 aa4.71□□□□□ -1.66
CKS1YBR135W ECM15P35195 104 aa4.71□□□□□ -1.66
CKS1YBR135W YPT53P36019 220 aa4.71□□□□□ -1.66
CKS1YBR135W MIC60P36112 540 aa4.71□□□□□ -1.66
CKS1YBR135W PIM1P36775 1133 aa4.71□□□□□ -1.66
CKS1YBR135W LRP1P38801 184 aaKnown RBP4.71□□□□□ -1.66
CKS1YBR135W YFR016CP43597 1233 aaKnown RBP4.71□□□□□ -1.66
CKS1YBR135W TCB2P48231 1178 aa4.71□□□□□ -1.66
CKS1YBR135W FMS1P50264 508 aa4.71□□□□□ -1.66
CKS1YBR135W YMR034CQ05131 434 aaPredicted RBP4.71□□□□□ -1.66
CKS1YBR135W GLO2Q05584 274 aa4.71□□□□□ -1.66
CKS1YBR135W DON1Q05610 365 aa4.71□□□□□ -1.66
CKS1YBR135W RRP45Q05636 305 aaKnown RBP4.71□□□□□ -1.66
CKS1YBR135W FMP45Q07651 309 aa4.71□□□□□ -1.66
CKS1YBR135W PDH1Q12428 516 aaKnown RBP4.71□□□□□ -1.66
CKS1YBR135W GPH1P06738 902 aaKnown RBP4.7□□□□□ -1.66
CKS1YBR135W ERV1P27882 189 aa4.7□□□□□ -1.66
CKS1YBR135W UTR4P32626 227 aa4.7□□□□□ -1.66
CKS1YBR135W THI2P38141 450 aa4.7□□□□□ -1.66
CKS1YBR135W ARC40P38328 384 aaKnown RBP4.7□□□□□ -1.66
CKS1YBR135W CSM2P40465 213 aa4.7□□□□□ -1.66
CKS1YBR135W TDA7P53882 636 aaPredicted RBP4.7□□□□□ -1.66
CKS1YBR135W KTR5P53966 522 aaPredicted RBP4.7□□□□□ -1.66
CKS1YBR135W SLD5Q03406 294 aa4.7□□□□□ -1.66
CKS1YBR135W IVY1Q04934 453 aa4.7□□□□□ -1.66
CKS1YBR135W YLR352WQ06479 807 aa4.7□□□□□ -1.66
CKS1YBR135W CFT2Q12102 859 aaPredicted RBP4.7□□□□□ -1.66
CKS1YBR135W RAD9P14737 1309 aa4.7□□□□□ -1.66
CKS1YBR135W MES1P00958 751 aaKnown RBP4.69□□□□□ -1.66
CKS1YBR135W ATP10P18496 279 aa4.69□□□□□ -1.66
CKS1YBR135W CPR2P23285 205 aa4.69□□□□□ -1.66
CKS1YBR135W PPZ1P26570 692 aa4.69□□□□□ -1.66
CKS1YBR135W ERG1P32476 496 aaKnown RBP4.69□□□□□ -1.66
CKS1YBR135W TOA1P32773 286 aa4.69□□□□□ -1.66
CKS1YBR135W VPS17P32913 551 aa4.69□□□□□ -1.66
CKS1YBR135W YTA12P40341 825 aa4.69□□□□□ -1.66
CKS1YBR135W SYG1P40528 902 aa4.69□□□□□ -1.66
CKS1YBR135W YIR014WP40570 242 aa4.69□□□□□ -1.66
CKS1YBR135W AZF1P41696 914 aa4.69□□□□□ -1.66
CKS1YBR135W TFG2P41896 400 aaPredicted RBP4.69□□□□□ -1.66
CKS1YBR135W ZIM17P42844 174 aa4.69□□□□□ -1.66
CKS1YBR135W CAK1P43568 368 aaPredicted RBP4.69□□□□□ -1.66
CKS1YBR135W SCD6P45978 349 aaKnown RBP RIP-Chip data4.69□□□□□ -1.66not detected
CKS1YBR135W URB2P47108 1174 aa4.69□□□□□ -1.66
CKS1YBR135W COS5P47187 383 aa4.69□□□□□ -1.66
CKS1YBR135W YGL138CP53122 345 aa4.69□□□□□ -1.66
CKS1YBR135W RMD9P53140 646 aaKnown RBP4.69□□□□□ -1.66
CKS1YBR135W ART5P53244 586 aaKnown RBP4.69□□□□□ -1.66
CKS1YBR135W OGG1P53397 376 aaPredicted RBP4.69□□□□□ -1.66
CKS1YBR135W CIK1Q01649 594 aa4.69□□□□□ -1.66
CKS1YBR135W YMR087WQ04299 284 aa4.69□□□□□ -1.66
CKS1YBR135W YLR281CQ05863 155 aa4.69□□□□□ -1.66
CKS1YBR135W BNA5Q05979 453 aa4.69□□□□□ -1.66
CKS1YBR135W PHO92Q06390 306 aa4.69□□□□□ -1.66
CKS1YBR135W COS7Q07788 383 aa4.69□□□□□ -1.66
CKS1YBR135W KEL3Q08979 651 aaPredicted RBP4.69□□□□□ -1.66
CKS1YBR135W RGT2Q12300 763 aa4.69□□□□□ -1.66
CKS1YBR135W RIP1P08067 215 aa4.68□□□□□ -1.66
CKS1YBR135W AMD1P15274 810 aaKnown RBP4.68□□□□□ -1.66
CKS1YBR135W MDH1P17505 334 aaKnown RBP RIP-Chip data4.68□□□□□ -1.66not detected
Retrieved 100 of 5,963 RNA–protein pairs in 12.6 ms