RNA–Protein interactions for RNA: ENST00000641375.1

PHGDH-216, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,196 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-216ENST00000641375 HSD17B4P51659 736 aa18.44■□□□□ 0.54
PHGDH-216ENST00000641375 HYIQ5T013 277 aa18.44■□□□□ 0.54
PHGDH-216ENST00000641375 PNMA5Q96PV4 448 aa18.44■□□□□ 0.54
PHGDH-216ENST00000641375 IFNKQ9P0W0 207 aa18.44■□□□□ 0.54
PHGDH-216ENST00000641375 FZD1Q9UP38 647 aa18.44■□□□□ 0.54
PHGDH-216ENST00000641375 SYNRGQ9UMZ2 1314 aa18.44■□□□□ 0.54
PHGDH-216ENST00000641375 RBBP6Q7Z6E9 1792 aaKnown RBP18.44■□□□□ 0.54
PHGDH-216ENST00000641375 USP2O75604 605 aaPredicted RBP18.44■□□□□ 0.54
PHGDH-216ENST00000641375 RHOBTB3O94955 611 aa18.44■□□□□ 0.54
PHGDH-216ENST00000641375 SERPINC1P01008 464 aa18.44■□□□□ 0.54
PHGDH-216ENST00000641375 CD44P16070 742 aaKnown RBP18.44■□□□□ 0.54
PHGDH-216ENST00000641375 GHRHRQ02643 423 aa18.44■□□□□ 0.54
PHGDH-216ENST00000641375 TMEM119Q4V9L6 283 aa18.44■□□□□ 0.54
PHGDH-216ENST00000641375 HAUS3Q68CZ6 603 aa18.44■□□□□ 0.54
PHGDH-216ENST00000641375 L3MBTL3Q96JM7 780 aaPredicted RBP18.44■□□□□ 0.54
PHGDH-216ENST00000641375 EIF2AK3Q9NZJ5 1116 aaKnown RBP18.44■□□□□ 0.54
PHGDH-216ENST00000641375 PRDM4Q9UKN5 801 aa18.44■□□□□ 0.54
PHGDH-216ENST00000641375 PPP1R12BO60237 982 aaPredicted RBP18.43■□□□□ 0.54
PHGDH-216ENST00000641375 ATP1A3P13637 1013 aa18.43■□□□□ 0.54
PHGDH-216ENST00000641375 HMGCS2P54868 508 aa18.43■□□□□ 0.54
PHGDH-216ENST00000641375 SPATA1Q5VX52 437 aa18.43■□□□□ 0.54
PHGDH-216ENST00000641375 KLHL10Q6JEL2 608 aa18.43■□□□□ 0.54
PHGDH-216ENST00000641375 CPXCR1Q8N123 301 aa18.43■□□□□ 0.54
PHGDH-216ENST00000641375 RAD54LQ92698 747 aa18.43■□□□□ 0.54
PHGDH-216ENST00000641375 GJA10Q969M2 543 aa18.43■□□□□ 0.54
PHGDH-216ENST00000641375 XPO4Q9C0E2 1151 aaKnown RBP18.43■□□□□ 0.54
PHGDH-216ENST00000641375 BLOC1S4Q9NUP1 217 aa18.43■□□□□ 0.54
PHGDH-216ENST00000641375 TMOD4Q9NZQ9 345 aa18.43■□□□□ 0.54
PHGDH-216ENST00000641375 SRCAPQ6ZRS2 3230 aa18.43■□□□□ 0.54
PHGDH-216ENST00000641375 KLRC4O43908 158 aa18.42■□□□□ 0.54
PHGDH-216ENST00000641375 CCT6AP40227 531 aaKnown RBP18.42■□□□□ 0.54
PHGDH-216ENST00000641375 KMT5BQ4FZB7 885 aa18.42■□□□□ 0.54
PHGDH-216ENST00000641375 USP50Q70EL3 339 aaPredicted RBP18.42■□□□□ 0.54
PHGDH-216ENST00000641375 TRMT44Q8IYL2 757 aaKnown RBP18.42■□□□□ 0.54
PHGDH-216ENST00000641375 SMYD4Q8IYR2 804 aaPredicted RBP18.42■□□□□ 0.54
PHGDH-216ENST00000641375 ERMNQ8TAM6 284 aa18.42■□□□□ 0.54
PHGDH-216ENST00000641375 RBM46Q8TBY0 533 aaKnown RBP18.42■□□□□ 0.54
PHGDH-216ENST00000641375 ZC3H4Q9UPT8 1303 aaKnown RBP18.42■□□□□ 0.54
PHGDH-216ENST00000641375 IGLV3-22A0A075B6J6 115 aa18.42■□□□□ 0.54
PHGDH-216ENST00000641375 VWA5AO00534 786 aa18.42■□□□□ 0.54
PHGDH-216ENST00000641375 MSH4O15457 936 aa18.42■□□□□ 0.54
PHGDH-216ENST00000641375 ALAS1P13196 640 aa18.42■□□□□ 0.54
PHGDH-216ENST00000641375 ZNF18P17022 549 aa18.42■□□□□ 0.54
PHGDH-216ENST00000641375 CDK11BP21127 795 aaKnown RBP18.42■□□□□ 0.54
PHGDH-216ENST00000641375 UBASH3AP57075 661 aa18.42■□□□□ 0.54
PHGDH-216ENST00000641375 MAP3K9P80192 1104 aa18.42■□□□□ 0.54
PHGDH-216ENST00000641375 CCDC186Q7Z3E2 898 aa18.42■□□□□ 0.54
PHGDH-216ENST00000641375 CLEC4DQ8WXI8 215 aa18.42■□□□□ 0.54
PHGDH-216ENST00000641375 NUDT12Q9BQG2 462 aa18.42■□□□□ 0.54
PHGDH-216ENST00000641375 RAVER2Q9HCJ3 691 aaKnown RBP18.42■□□□□ 0.54
PHGDH-216ENST00000641375 RWDD2AQ9UIY3 292 aa18.42■□□□□ 0.54
PHGDH-216ENST00000641375 AFG3L2Q9Y4W6 797 aa18.42■□□□□ 0.54
PHGDH-216ENST00000641375 ASIC1P78348 528 aa18.41■□□□□ 0.54
PHGDH-216ENST00000641375 SPIRE1Q08AE8 756 aa18.41■□□□□ 0.54
PHGDH-216ENST00000641375 STIM1Q13586 685 aa18.41■□□□□ 0.54
PHGDH-216ENST00000641375 ZC3H15Q8WU90 426 aaKnown RBP18.41■□□□□ 0.54
PHGDH-216ENST00000641375 MED15Q96RN5 788 aa18.41■□□□□ 0.54
PHGDH-216ENST00000641375 IMPACTQ9P2X3 320 aa18.41■□□□□ 0.54
PHGDH-216ENST00000641375 RLFQ13129 1914 aa18.41■□□□□ 0.54
PHGDH-216ENST00000641375 PPP1R2P41236 205 aa18.41■□□□□ 0.54
PHGDH-216ENST00000641375 OAZ1P54368 228 aa18.41■□□□□ 0.54
PHGDH-216ENST00000641375 SETQ01105 290 aaPredicted RBP18.41■□□□□ 0.54
PHGDH-216ENST00000641375 PAK1Q13153 545 aa18.41■□□□□ 0.54
PHGDH-216ENST00000641375 PRKG1Q13976 671 aa18.41■□□□□ 0.54
PHGDH-216ENST00000641375 KRT26Q7Z3Y9 468 aa18.41■□□□□ 0.54
PHGDH-216ENST00000641375 GIMAP8Q8ND71 665 aaPredicted RBP18.41■□□□□ 0.54
PHGDH-216ENST00000641375 EXOC1Q9NV70 894 aa18.41■□□□□ 0.54
PHGDH-216ENST00000641375 CSADQ9Y600 493 aa18.41■□□□□ 0.54
PHGDH-216ENST00000641375 NFIBO00712 420 aa18.4■□□□□ 0.54
PHGDH-216ENST00000641375 PTGS1P23219 599 aa18.4■□□□□ 0.54
PHGDH-216ENST00000641375 HOXA7P31268 230 aaPredicted RBP18.4■□□□□ 0.54
PHGDH-216ENST00000641375 DHX8Q14562 1220 aaKnown RBP18.4■□□□□ 0.54
PHGDH-216ENST00000641375 MCM6Q14566 821 aa18.4■□□□□ 0.54
PHGDH-216ENST00000641375 COG2Q14746 738 aa18.4■□□□□ 0.54
PHGDH-216ENST00000641375 CEP55Q53EZ4 464 aa18.4■□□□□ 0.54
PHGDH-216ENST00000641375 CNNM4Q6P4Q7 775 aa18.4■□□□□ 0.54
PHGDH-216ENST00000641375 CYP2W1Q8TAV3 490 aa18.4■□□□□ 0.54
PHGDH-216ENST00000641375 NRBP1Q9UHY1 535 aa18.4■□□□□ 0.54
PHGDH-216ENST00000641375 CTNND2Q9UQB3 1225 aa18.4■□□□□ 0.54
PHGDH-216ENST00000641375 PAPPA2Q9BXP8 1791 aa18.4■□□□□ 0.54
PHGDH-216ENST00000641375 COL11A1P12107 1806 aaPredicted RBP18.4■□□□□ 0.54
PHGDH-216ENST00000641375 PVALEFA0A1B0GWK0 134 aa18.4■□□□□ 0.54
PHGDH-216ENST00000641375 ADM5C9JUS6 153 aa18.4■□□□□ 0.54
PHGDH-216ENST00000641375 ZNF500O60304 480 aaPredicted RBP18.4■□□□□ 0.54
PHGDH-216ENST00000641375 PRCPP42785 496 aa18.4■□□□□ 0.54
PHGDH-216ENST00000641375 IREB2P48200 963 aaKnown RBP18.4■□□□□ 0.54
PHGDH-216ENST00000641375 VGLL4Q14135 290 aa18.4■□□□□ 0.54
PHGDH-216ENST00000641375 SH3D19Q5HYK7 790 aa18.4■□□□□ 0.54
PHGDH-216ENST00000641375 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.4■□□□□ 0.54
PHGDH-216ENST00000641375 ATG4CQ96DT6 458 aa18.4■□□□□ 0.54
PHGDH-216ENST00000641375 ZNF830Q96NB3 372 aaPredicted RBP18.4■□□□□ 0.54
PHGDH-216ENST00000641375 WDR90Q96KV7 1748 aa18.39■□□□□ 0.53
PHGDH-216ENST00000641375 DSG3P32926 999 aa18.39■□□□□ 0.53
PHGDH-216ENST00000641375 NF2P35240 595 aa18.39■□□□□ 0.53
PHGDH-216ENST00000641375 PDE4DQ08499 809 aa18.39■□□□□ 0.53
PHGDH-216ENST00000641375 TPD52L1Q16890 204 aaPredicted RBP18.39■□□□□ 0.53
PHGDH-216ENST00000641375 ADSSL1Q8N142 457 aa18.39■□□□□ 0.53
PHGDH-216ENST00000641375 KCTD17Q8N5Z5 321 aa18.39■□□□□ 0.53
PHGDH-216ENST00000641375 ADAMTS5Q9UNA0 930 aa18.39■□□□□ 0.53
PHGDH-216ENST00000641375 GDAQ9Y2T3 454 aa18.39■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms