RNA–Protein interactions for RNA: ENST00000640859.1

GFAP-238, Transcript of glial fibrillary acidic protein, humanhuman

TSL 5

Gene GFAP, Length 1,162 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFAP-238ENST00000640859 CALML4Q96GE6 196 aa12.64□□□□□ -0.39
GFAP-238ENST00000640859 ANO3Q9BYT9 981 aa12.64□□□□□ -0.39
GFAP-238ENST00000640859 TMEM39BQ9GZU3 492 aa12.64□□□□□ -0.39
GFAP-238ENST00000640859 TMX1Q9H3N1 280 aa12.64□□□□□ -0.39
GFAP-238ENST00000640859 BLOC1S4Q9NUP1 217 aa12.64□□□□□ -0.39
GFAP-238ENST00000640859 STK17AQ9UEE5 414 aa12.64□□□□□ -0.39
GFAP-238ENST00000640859 LIMA1Q9UHB6 759 aaKnown RBP12.64□□□□□ -0.39
GFAP-238ENST00000640859 DDX25Q9UHL0 483 aaKnown RBP12.64□□□□□ -0.39
GFAP-238ENST00000640859 PRR12Q9ULL5 1215 aa12.64□□□□□ -0.39
GFAP-238ENST00000640859 SMCHD1A6NHR9 2005 aa12.63□□□□□ -0.39
GFAP-238ENST00000640859 LRRC10BA6NIK2 292 aa12.63□□□□□ -0.39
GFAP-238ENST00000640859 TMEM88BA6NKF7 163 aa12.63□□□□□ -0.39
GFAP-238ENST00000640859 SLC26A4O43511 780 aa12.63□□□□□ -0.39
GFAP-238ENST00000640859 PLA2G6O60733 806 aa12.63□□□□□ -0.39
GFAP-238ENST00000640859 CAP2P40123 477 aa12.63□□□□□ -0.39
GFAP-238ENST00000640859 PBX1P40424 430 aa12.63□□□□□ -0.39
GFAP-238ENST00000640859 APLP1P51693 650 aa12.63□□□□□ -0.39
GFAP-238ENST00000640859 AMPD3Q01432 767 aa12.63□□□□□ -0.39
GFAP-238ENST00000640859 ARMC9Q7Z3E5 817 aa12.63□□□□□ -0.39
GFAP-238ENST00000640859 TEX2Q8IWB9 1127 aa12.63□□□□□ -0.39
GFAP-238ENST00000640859 GIMAP8Q8ND71 665 aaPredicted RBP12.63□□□□□ -0.39
GFAP-238ENST00000640859 CDCA5Q96FF9 252 aa12.63□□□□□ -0.39
GFAP-238ENST00000640859 P2RX7Q99572 595 aaKnown RBP12.63□□□□□ -0.39
GFAP-238ENST00000640859 GTPBP4Q9BZE4 634 aaKnown RBP12.63□□□□□ -0.39
GFAP-238ENST00000640859 RAB34Q9BZG1 259 aa12.63□□□□□ -0.39
GFAP-238ENST00000640859 TRIM9Q9C026 710 aa12.63□□□□□ -0.39
GFAP-238ENST00000640859 GOPCQ9HD26 462 aa12.63□□□□□ -0.39
GFAP-238ENST00000640859 ADD3Q9UEY8 706 aaKnown RBP12.63□□□□□ -0.39
GFAP-238ENST00000640859 ABT1Q9ULW3 272 aaKnown RBP12.63□□□□□ -0.39
GFAP-238ENST00000640859 ADM5C9JUS6 153 aa12.62□□□□□ -0.39
GFAP-238ENST00000640859 OPLAHO14841 1288 aa12.62□□□□□ -0.39
GFAP-238ENST00000640859 FOSP01100 380 aaPredicted RBP12.62□□□□□ -0.39
GFAP-238ENST00000640859 IREB2P48200 963 aaKnown RBP12.62□□□□□ -0.39
GFAP-238ENST00000640859 IKQ13123 557 aaPredicted RBP12.62□□□□□ -0.39
GFAP-238ENST00000640859 COBLL1Q53SF7 1204 aa12.62□□□□□ -0.39
GFAP-238ENST00000640859 HYIQ5T013 277 aa12.62□□□□□ -0.39
GFAP-238ENST00000640859 KRT79Q5XKE5 535 aa12.62□□□□□ -0.39
GFAP-238ENST00000640859 CNNM4Q6P4Q7 775 aa12.62□□□□□ -0.39
GFAP-238ENST00000640859 SV2BQ7L1I2 683 aa12.62□□□□□ -0.39
GFAP-238ENST00000640859 CCAR2Q8N163 923 aaKnown RBP12.62□□□□□ -0.39
GFAP-238ENST00000640859 CCDC47Q96A33 483 aaKnown RBP12.62□□□□□ -0.39
GFAP-238ENST00000640859 PRIMPOLQ96LW4 560 aa12.62□□□□□ -0.39
GFAP-238ENST00000640859 CTAGE1Q96RT6 745 aa12.62□□□□□ -0.39
GFAP-238ENST00000640859 NUDT12Q9BQG2 462 aa12.62□□□□□ -0.39
GFAP-238ENST00000640859 VCPKMTQ9H867 229 aa12.62□□□□□ -0.39
GFAP-238ENST00000640859 KCNMB3Q9NPA1 279 aa12.62□□□□□ -0.39
GFAP-238ENST00000640859 ASTN2O75129 1339 aaPredicted RBP12.62□□□□□ -0.39
GFAP-238ENST00000640859 ATAD5Q96QE3 1844 aa12.61□□□□□ -0.39
GFAP-238ENST00000640859 POTEMA6NI47 508 aa12.61□□□□□ -0.39
GFAP-238ENST00000640859 MYMKA6NI61 221 aa12.61□□□□□ -0.39
GFAP-238ENST00000640859 USP27XA6NNY8 438 aa12.61□□□□□ -0.39
GFAP-238ENST00000640859 TEX33O43247 280 aa12.61□□□□□ -0.39
GFAP-238ENST00000640859 COBLO75128 1261 aa12.61□□□□□ -0.39
GFAP-238ENST00000640859 ITGBL1O95965 494 aaPredicted RBP12.61□□□□□ -0.39
GFAP-238ENST00000640859 SPAG1Q07617 926 aa12.61□□□□□ -0.39
GFAP-238ENST00000640859 TRAF1Q13077 416 aa12.61□□□□□ -0.39
GFAP-238ENST00000640859 MCM6Q14566 821 aa12.61□□□□□ -0.39
GFAP-238ENST00000640859 PTPN21Q16825 1174 aa12.61□□□□□ -0.39
GFAP-238ENST00000640859 TPD52L1Q16890 204 aaPredicted RBP12.61□□□□□ -0.39
GFAP-238ENST00000640859 FAM83BQ5T0W9 1011 aa12.61□□□□□ -0.39
GFAP-238ENST00000640859 SPECC1LQ69YQ0 1117 aa12.61□□□□□ -0.39
GFAP-238ENST00000640859 PAXIP1Q6ZW49 1069 aaPredicted RBP12.61□□□□□ -0.39
GFAP-238ENST00000640859 MIGA2Q7L4E1 593 aa12.61□□□□□ -0.39
GFAP-238ENST00000640859 SPICE1Q8N0Z3 855 aa12.61□□□□□ -0.39
GFAP-238ENST00000640859 CCDC112Q8NEF3 446 aa12.61□□□□□ -0.39
GFAP-238ENST00000640859 SNX29Q8TEQ0 813 aa12.61□□□□□ -0.39
GFAP-238ENST00000640859 CHURC1Q8WUH1 139 aa12.61□□□□□ -0.39
GFAP-238ENST00000640859 RAD54LQ92698 747 aa12.61□□□□□ -0.39
GFAP-238ENST00000640859 DHTKD1Q96HY7 919 aaPredicted RBP12.61□□□□□ -0.39
GFAP-238ENST00000640859 GBA2Q9HCG7 927 aaPredicted RBP12.61□□□□□ -0.39
GFAP-238ENST00000640859 PVALEFA0A1B0GWK0 134 aa12.6□□□□□ -0.39
GFAP-238ENST00000640859 PHF20L1A8MW92 1017 aa12.6□□□□□ -0.39
GFAP-238ENST00000640859 PIK3CDO00329 1044 aa12.6□□□□□ -0.39
GFAP-238ENST00000640859 TRAF5O00463 557 aa12.6□□□□□ -0.39
GFAP-238ENST00000640859 NRDCO43847 1150 aa12.6□□□□□ -0.39
GFAP-238ENST00000640859 CYP3A4P08684 503 aa12.6□□□□□ -0.39
GFAP-238ENST00000640859 HSPA6P17066 643 aa12.6□□□□□ -0.39
GFAP-238ENST00000640859 TAL1P17542 331 aaPredicted RBP12.6□□□□□ -0.39
GFAP-238ENST00000640859 HOXA7P31268 230 aaPredicted RBP12.6□□□□□ -0.39
GFAP-238ENST00000640859 CIITAP33076 1130 aa12.6□□□□□ -0.39
GFAP-238ENST00000640859 SREBF1P36956 1147 aa12.6□□□□□ -0.39
GFAP-238ENST00000640859 PPP1R2P41236 205 aa12.6□□□□□ -0.39
GFAP-238ENST00000640859 STAT2P52630 851 aa12.6□□□□□ -0.39
GFAP-238ENST00000640859 ASIC1P78348 528 aa12.6□□□□□ -0.39
GFAP-238ENST00000640859 ARHGAP4P98171 946 aa12.6□□□□□ -0.39
GFAP-238ENST00000640859 STIM1Q13586 685 aa12.6□□□□□ -0.39
GFAP-238ENST00000640859 KRT31Q15323 416 aa12.6□□□□□ -0.39
GFAP-238ENST00000640859 ECM1Q16610 540 aa12.6□□□□□ -0.39
GFAP-238ENST00000640859 USH1GQ495M9 461 aa12.6□□□□□ -0.39
GFAP-238ENST00000640859 Q4G0T1 1027 aa12.6□□□□□ -0.39
GFAP-238ENST00000640859 FILIP1LQ4L180 1135 aa12.6□□□□□ -0.39
GFAP-238ENST00000640859 E4F1Q66K89 784 aaPredicted RBP12.6□□□□□ -0.39
GFAP-238ENST00000640859 NYAP1Q6ZVC0 841 aa12.6□□□□□ -0.39
GFAP-238ENST00000640859 FAM160B2Q86V87 743 aa12.6□□□□□ -0.39
GFAP-238ENST00000640859 IRF2BP1Q8IU81 584 aa12.6□□□□□ -0.39
GFAP-238ENST00000640859 TMEM139Q8IV31 216 aa12.6□□□□□ -0.39
GFAP-238ENST00000640859 CDK5RAP3Q96JB5 506 aa12.6□□□□□ -0.39
GFAP-238ENST00000640859 TEPSINQ96N21 525 aa12.6□□□□□ -0.39
GFAP-238ENST00000640859 RANBP17Q9H2T7 1088 aaKnown RBP12.6□□□□□ -0.39
GFAP-238ENST00000640859 SH2D4AQ9H788 454 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms