RNA–Protein interactions for RNA: ENST00000640264.1

HNRNPU-227, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 3

Gene HNRNPU, Length 328 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-227ENST00000640264 MBD3O95983 291 aa12.34□□□□□ -0.43
HNRNPU-227ENST00000640264 PTPN11Q06124 597 aaPredicted RBP12.34□□□□□ -0.43
HNRNPU-227ENST00000640264 CCDC96Q2M329 555 aa12.34□□□□□ -0.43
HNRNPU-227ENST00000640264 MCTP1Q6DN14 999 aa12.34□□□□□ -0.43
HNRNPU-227ENST00000640264 GAS2L3Q86XJ1 694 aa12.34□□□□□ -0.43
HNRNPU-227ENST00000640264 TICAM2Q86XR7 235 aa12.34□□□□□ -0.43
HNRNPU-227ENST00000640264 DCAF4Q8WV16 495 aa12.34□□□□□ -0.43
HNRNPU-227ENST00000640264 EVI5LQ96CN4 794 aa12.34□□□□□ -0.43
HNRNPU-227ENST00000640264 IL25Q9H293 177 aa12.34□□□□□ -0.43
HNRNPU-227ENST00000640264 RANBP17Q9H2T7 1088 aaKnown RBP12.34□□□□□ -0.43
HNRNPU-227ENST00000640264 MTMR7Q9Y216 660 aa12.34□□□□□ -0.43
HNRNPU-227ENST00000640264 SNX14Q9Y5W7 946 aa12.34□□□□□ -0.43
HNRNPU-227ENST00000640264 SCN10AQ9Y5Y9 1956 aa12.34□□□□□ -0.43
HNRNPU-227ENST00000640264 KCNJ6P48051 423 aa12.33□□□□□ -0.44
HNRNPU-227ENST00000640264 PDE4DQ08499 809 aa12.33□□□□□ -0.44
HNRNPU-227ENST00000640264 GRB10Q13322 594 aa12.33□□□□□ -0.44
HNRNPU-227ENST00000640264 PKP1Q13835 747 aa12.33□□□□□ -0.44
HNRNPU-227ENST00000640264 PPP2R5BQ15173 497 aa12.33□□□□□ -0.44
HNRNPU-227ENST00000640264 CCDC155Q8N6L0 562 aa12.33□□□□□ -0.44
HNRNPU-227ENST00000640264 SCFD2Q8WU76 684 aa12.33□□□□□ -0.44
HNRNPU-227ENST00000640264 IL17RBQ9NRM6 502 aa12.33□□□□□ -0.44
HNRNPU-227ENST00000640264 PNMA2Q9UL42 364 aa12.33□□□□□ -0.44
HNRNPU-227ENST00000640264 TANC1Q9C0D5 1861 aa12.33□□□□□ -0.44
HNRNPU-227ENST00000640264 TRIP12Q14669 1992 aaPredicted RBP12.32□□□□□ -0.44
HNRNPU-227ENST00000640264 A6NJR5 290 aa12.32□□□□□ -0.44
HNRNPU-227ENST00000640264 B4DLN1 442 aa12.32□□□□□ -0.44
HNRNPU-227ENST00000640264 NFIBO00712 420 aa12.32□□□□□ -0.44
HNRNPU-227ENST00000640264 RANBP6O60518 1105 aaKnown RBP12.32□□□□□ -0.44
HNRNPU-227ENST00000640264 NMT2O60551 498 aa12.32□□□□□ -0.44
HNRNPU-227ENST00000640264 GPR37L1O60883 481 aa12.32□□□□□ -0.44
HNRNPU-227ENST00000640264 CALML3P27482 149 aa12.32□□□□□ -0.44
HNRNPU-227ENST00000640264 SLC16A2P36021 539 aa12.32□□□□□ -0.44
HNRNPU-227ENST00000640264 MRPL12P52815 198 aaKnown RBP12.32□□□□□ -0.44
HNRNPU-227ENST00000640264 CHMP4BP1P59074 171 aa12.32□□□□□ -0.44
HNRNPU-227ENST00000640264 SYDE2Q5VT97 1194 aa12.32□□□□□ -0.44
HNRNPU-227ENST00000640264 RNF207Q6ZRF8 634 aa12.32□□□□□ -0.44
HNRNPU-227ENST00000640264 PPP1R9BQ96SB3 815 aa12.32□□□□□ -0.44
HNRNPU-227ENST00000640264 ZBED2Q9BTP6 218 aa12.32□□□□□ -0.44
HNRNPU-227ENST00000640264 PANK2Q9BZ23 570 aa12.32□□□□□ -0.44
HNRNPU-227ENST00000640264 LMCD1Q9NZU5 365 aa12.32□□□□□ -0.44
HNRNPU-227ENST00000640264 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.32□□□□□ -0.44
HNRNPU-227ENST00000640264 TET1Q8NFU7 2136 aa12.31□□□□□ -0.44
HNRNPU-227ENST00000640264 ARHGEF15O94989 841 aa12.31□□□□□ -0.44
HNRNPU-227ENST00000640264 TXNP10599 105 aaKnown RBP12.31□□□□□ -0.44
HNRNPU-227ENST00000640264 PDIA4P13667 645 aaKnown RBP12.31□□□□□ -0.44
HNRNPU-227ENST00000640264 CTDSPL2Q05D32 466 aa12.31□□□□□ -0.44
HNRNPU-227ENST00000640264 PTGISQ16647 500 aa12.31□□□□□ -0.44
HNRNPU-227ENST00000640264 TTBK2Q6IQ55 1244 aa12.31□□□□□ -0.44
HNRNPU-227ENST00000640264 BTNL9Q6UXG8 535 aa12.31□□□□□ -0.44
HNRNPU-227ENST00000640264 SLC30A10Q6XR72 485 aa12.31□□□□□ -0.44
HNRNPU-227ENST00000640264 RASGRP2Q7LDG7 609 aa12.31□□□□□ -0.44
HNRNPU-227ENST00000640264 TMEM87AQ8NBN3 555 aa12.31□□□□□ -0.44
HNRNPU-227ENST00000640264 CAGE1Q8TC20 777 aa12.31□□□□□ -0.44
HNRNPU-227ENST00000640264 AFAP1L1Q8TED9 768 aa12.31□□□□□ -0.44
HNRNPU-227ENST00000640264 PPP1R13LQ8WUF5 828 aa12.31□□□□□ -0.44
HNRNPU-227ENST00000640264 DIAPH3Q9NSV4 1193 aa12.31□□□□□ -0.44
HNRNPU-227ENST00000640264 LPXNO60711 386 aa12.3□□□□□ -0.44
HNRNPU-227ENST00000640264 PARNO95453 639 aaKnown RBP12.3□□□□□ -0.44
HNRNPU-227ENST00000640264 NOVP48745 357 aa12.3□□□□□ -0.44
HNRNPU-227ENST00000640264 WDR5P61964 334 aaKnown RBP12.3□□□□□ -0.44
HNRNPU-227ENST00000640264 CCDC173Q0VFZ6 552 aa12.3□□□□□ -0.44
HNRNPU-227ENST00000640264 VPS53Q5VIR6 699 aa12.3□□□□□ -0.44
HNRNPU-227ENST00000640264 DNERQ8NFT8 737 aa12.3□□□□□ -0.44
HNRNPU-227ENST00000640264 CLEC4DQ8WXI8 215 aa12.3□□□□□ -0.44
HNRNPU-227ENST00000640264 ZSCAN31Q96LW9 406 aaPredicted RBP12.3□□□□□ -0.44
HNRNPU-227ENST00000640264 GPCPD1Q9NPB8 672 aa12.3□□□□□ -0.44
HNRNPU-227ENST00000640264 INCENPQ9NQS7 918 aa12.3□□□□□ -0.44
HNRNPU-227ENST00000640264 LIMCH1Q9UPQ0 1083 aa12.3□□□□□ -0.44
HNRNPU-227ENST00000640264 COL4A4P53420 1690 aaPredicted RBP12.29□□□□□ -0.44
HNRNPU-227ENST00000640264 LCHNA4D1U4 455 aa12.29□□□□□ -0.44
HNRNPU-227ENST00000640264 FAM86C2PA6NEL3 165 aa12.29□□□□□ -0.44
HNRNPU-227ENST00000640264 PI4K2BG5E9Z4 385 aa12.29□□□□□ -0.44
HNRNPU-227ENST00000640264 FOXP2O15409 715 aa12.29□□□□□ -0.44
HNRNPU-227ENST00000640264 TOP1P11387 765 aaKnown RBP12.29□□□□□ -0.44
HNRNPU-227ENST00000640264 SELPP16109 830 aa12.29□□□□□ -0.44
HNRNPU-227ENST00000640264 EDNRBP24530 442 aa12.29□□□□□ -0.44
HNRNPU-227ENST00000640264 CLCN1P35523 988 aa12.29□□□□□ -0.44
HNRNPU-227ENST00000640264 RPS6P62753 249 aaKnown RBP12.29□□□□□ -0.44
HNRNPU-227ENST00000640264 NECTIN1Q15223 517 aa12.29□□□□□ -0.44
HNRNPU-227ENST00000640264 ZSCAN23Q3MJ62 389 aa12.29□□□□□ -0.44
HNRNPU-227ENST00000640264 GPT2Q8TD30 523 aa12.29□□□□□ -0.44
HNRNPU-227ENST00000640264 COPS5Q92905 334 aa12.29□□□□□ -0.44
HNRNPU-227ENST00000640264 ZSWIM6Q9HCJ5 1215 aa12.29□□□□□ -0.44
HNRNPU-227ENST00000640264 RTN4Q9NQC3 1192 aaKnown RBP12.29□□□□□ -0.44
HNRNPU-227ENST00000640264 RRAGDQ9NQL2 400 aaPredicted RBP12.29□□□□□ -0.44
HNRNPU-227ENST00000640264 SH2B1Q9NRF2 756 aaPredicted RBP12.29□□□□□ -0.44
HNRNPU-227ENST00000640264 HELLSQ9NRZ9 838 aa12.29□□□□□ -0.44
HNRNPU-227ENST00000640264 TOMM22Q9NS69 142 aa12.29□□□□□ -0.44
HNRNPU-227ENST00000640264 ANAPC4Q9UJX5 808 aa12.29□□□□□ -0.44
HNRNPU-227ENST00000640264 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.29□□□□□ -0.44
HNRNPU-227ENST00000640264 FRMPD2Q68DX3 1309 aaPredicted RBP12.29□□□□□ -0.44
HNRNPU-227ENST00000640264 CCDC171Q6TFL3 1326 aa12.29□□□□□ -0.44
HNRNPU-227ENST00000640264 PTPRSQ13332 1948 aa12.29□□□□□ -0.44
HNRNPU-227ENST00000640264 ORC4O43929 436 aa12.28□□□□□ -0.44
HNRNPU-227ENST00000640264 PRPF40AO75400 957 aaKnown RBP12.28□□□□□ -0.44
HNRNPU-227ENST00000640264 TSGA10IPQ3SY00 556 aa12.28□□□□□ -0.44
HNRNPU-227ENST00000640264 CNKSR3Q6P9H4 555 aa12.28□□□□□ -0.44
HNRNPU-227ENST00000640264 LRRC8DQ7L1W4 858 aa12.28□□□□□ -0.44
HNRNPU-227ENST00000640264 SPRED2Q7Z698 418 aa12.28□□□□□ -0.44
HNRNPU-227ENST00000640264 SESTD1Q86VW0 696 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms