RNA–Protein interactions for RNA: ENST00000639953.1

ATM-229, Transcript of ATM serine/threonine kinase, humanhuman

TSL 5 BASIC

Gene ATM, Length 587 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-229ENST00000639953 HLFQ16534 295 aa7.54□□□□□ -1.2
ATM-229ENST00000639953 PRAMEF13Q5VWM6 474 aa7.54□□□□□ -1.2
ATM-229ENST00000639953 TBC1D9BQ66K14 1250 aa7.54□□□□□ -1.2
ATM-229ENST00000639953 LETMD1Q6P1Q0 360 aa7.54□□□□□ -1.2
ATM-229ENST00000639953 TTLL7Q6ZT98 887 aa7.54□□□□□ -1.2
ATM-229ENST00000639953 CDH24Q86UP0 819 aa7.54□□□□□ -1.2
ATM-229ENST00000639953 MFSD2AQ8NA29 543 aa7.54□□□□□ -1.2
ATM-229ENST00000639953 NLGN2Q8NFZ4 835 aa7.54□□□□□ -1.2
ATM-229ENST00000639953 LMCD1Q9NZU5 365 aa7.54□□□□□ -1.2
ATM-229ENST00000639953 ST14Q9Y5Y6 855 aa7.54□□□□□ -1.2
ATM-229ENST00000639953 CAPN6Q9Y6Q1 641 aa7.54□□□□□ -1.2
ATM-229ENST00000639953 N4BP2Q86UW6 1770 aaPredicted RBP7.54□□□□□ -1.2
ATM-229ENST00000639953 A0A087WZG4 1122 aa7.53□□□□□ -1.2
ATM-229ENST00000639953 DBX1A6NMT0 343 aa7.53□□□□□ -1.2
ATM-229ENST00000639953 IQCJ-SCHIP1C9J366 451 aaPredicted RBP7.53□□□□□ -1.2
ATM-229ENST00000639953 POLRMTO00411 1230 aaKnown RBP7.53□□□□□ -1.2
ATM-229ENST00000639953 ZNF865P0CJ78 1059 aaPredicted RBP7.53□□□□□ -1.2
ATM-229ENST00000639953 TM4SF1P30408 202 aa7.53□□□□□ -1.2
ATM-229ENST00000639953 GNA15P30679 374 aa7.53□□□□□ -1.2
ATM-229ENST00000639953 CAP2P40123 477 aa7.53□□□□□ -1.2
ATM-229ENST00000639953 AIMP1Q12904 312 aaKnown RBP7.53□□□□□ -1.2
ATM-229ENST00000639953 NFIXQ14938 502 aa7.53□□□□□ -1.2
ATM-229ENST00000639953 CCDC85BQ15834 202 aaPredicted RBP7.53□□□□□ -1.2
ATM-229ENST00000639953 LRP10Q7Z4F1 713 aa7.53□□□□□ -1.2
ATM-229ENST00000639953 ITPRIPQ8IWB1 547 aa7.53□□□□□ -1.2
ATM-229ENST00000639953 NLGN1Q8N2Q7 840 aa7.53□□□□□ -1.2
ATM-229ENST00000639953 MFSD4AQ8N468 514 aa7.53□□□□□ -1.2
ATM-229ENST00000639953 UBE2FQ969M7 185 aa7.53□□□□□ -1.2
ATM-229ENST00000639953 FRMD6Q96NE9 622 aa7.53□□□□□ -1.2
ATM-229ENST00000639953 SYT17Q9BSW7 474 aa7.53□□□□□ -1.2
ATM-229ENST00000639953 ANP32EQ9BTT0 268 aa7.53□□□□□ -1.2
ATM-229ENST00000639953 C19orf73Q9NVV2 129 aa7.53□□□□□ -1.2
ATM-229ENST00000639953 CHPF2Q9P2E5 772 aa7.53□□□□□ -1.2
ATM-229ENST00000639953 AK5Q9Y6K8 562 aa7.53□□□□□ -1.2
ATM-229ENST00000639953 ABCC4O15439 1325 aa7.52□□□□□ -1.2
ATM-229ENST00000639953 KIAA1551Q9HCM1 1747 aa7.52□□□□□ -1.2
ATM-229ENST00000639953 KIF13BQ9NQT8 1826 aa7.52□□□□□ -1.2
ATM-229ENST00000639953 CST3P01034 146 aaPredicted RBP7.52□□□□□ -1.21
ATM-229ENST00000639953 ZNF428Q96B54 188 aa7.52□□□□□ -1.21
ATM-229ENST00000639953 NRXN2Q9P2S2 1712 aa7.52□□□□□ -1.21
ATM-229ENST00000639953 WASH4PA8MWX3 477 aa7.51□□□□□ -1.21
ATM-229ENST00000639953 F6X3S4 739 aa7.51□□□□□ -1.21
ATM-229ENST00000639953 SERPINB2P05120 415 aa7.51□□□□□ -1.21
ATM-229ENST00000639953 HOXB7P09629 217 aa7.51□□□□□ -1.21
ATM-229ENST00000639953 AFMP43652 599 aa7.51□□□□□ -1.21
ATM-229ENST00000639953 PRR23BQ6ZRT6 265 aa7.51□□□□□ -1.21
ATM-229ENST00000639953 COPS6Q7L5N1 327 aa7.51□□□□□ -1.21
ATM-229ENST00000639953 NPAS4Q8IUM7 802 aa7.51□□□□□ -1.21
ATM-229ENST00000639953 SMC5Q8IY18 1101 aa7.51□□□□□ -1.21
ATM-229ENST00000639953 FAM84AQ96KN4 292 aa7.51□□□□□ -1.21
ATM-229ENST00000639953 IPO9Q96P70 1041 aaKnown RBP7.51□□□□□ -1.21
ATM-229ENST00000639953 DUSP9Q99956 384 aaKnown RBP7.51□□□□□ -1.21
ATM-229ENST00000639953 DPH2Q9BQC3 489 aaPredicted RBP7.51□□□□□ -1.21
ATM-229ENST00000639953 PHAXQ9H814 394 aaKnown RBP7.51□□□□□ -1.21
ATM-229ENST00000639953 DDX21Q9NR30 783 aaKnown RBP eCLIP7.51□□□□□ -1.21
ATM-229ENST00000639953 ZSWIM5Q9P217 1185 aa7.51□□□□□ -1.21
ATM-229ENST00000639953 TJP2Q9UDY2 1190 aa7.51□□□□□ -1.21
ATM-229ENST00000639953 ANKRD31Q8N7Z5 1873 aa7.51□□□□□ -1.21
ATM-229ENST00000639953 ARFGEF2Q9Y6D5 1785 aa7.51□□□□□ -1.21
ATM-229ENST00000639953 MAP3K15Q6ZN16 1313 aa7.51□□□□□ -1.21
ATM-229ENST00000639953 CARMIL3Q8ND23 1372 aa7.5□□□□□ -1.21
ATM-229ENST00000639953 GPTP24298 496 aa7.5□□□□□ -1.21
ATM-229ENST00000639953 TNK2Q07912 1038 aa7.5□□□□□ -1.21
ATM-229ENST00000639953 HDAC1Q13547 482 aaPredicted RBP7.5□□□□□ -1.21
ATM-229ENST00000639953 PKN1Q16512 942 aa7.5□□□□□ -1.21
ATM-229ENST00000639953 MEI1Q5TIA1 1274 aa7.5□□□□□ -1.21
ATM-229ENST00000639953 KIF6Q6ZMV9 814 aa7.5□□□□□ -1.21
ATM-229ENST00000639953 AGMOQ6ZNB7 445 aa7.5□□□□□ -1.21
ATM-229ENST00000639953 C22orf34Q6ZV56 151 aa7.5□□□□□ -1.21
ATM-229ENST00000639953 C16orf71Q8IYS4 520 aaPredicted RBP7.5□□□□□ -1.21
ATM-229ENST00000639953 JARID2Q92833 1246 aaPredicted RBP7.5□□□□□ -1.21
ATM-229ENST00000639953 SLC38A3Q99624 504 aa7.5□□□□□ -1.21
ATM-229ENST00000639953 DBF4Q9UBU7 674 aaPredicted RBP7.5□□□□□ -1.21
ATM-229ENST00000639953 ANKRD36CQ5JPF3 1778 aa7.5□□□□□ -1.21
ATM-229ENST00000639953 C10orf71Q711Q0 1435 aa7.5□□□□□ -1.21
ATM-229ENST00000639953 UBN2Q6ZU65 1347 aa7.5□□□□□ -1.21
ATM-229ENST00000639953 A0A0G2JLW4 131 aa7.49□□□□□ -1.21
ATM-229ENST00000639953 PRPF40AO75400 957 aaKnown RBP7.49□□□□□ -1.21
ATM-229ENST00000639953 LIG3P49916 1009 aa7.49□□□□□ -1.21
ATM-229ENST00000639953 RPS26P62854 115 aaKnown RBP7.49□□□□□ -1.21
ATM-229ENST00000639953 INTS3Q68E01 1043 aaKnown RBP7.49□□□□□ -1.21
ATM-229ENST00000639953 FTSJ3Q8IY81 847 aaKnown RBP7.49□□□□□ -1.21
ATM-229ENST00000639953 OTUD7AQ8TE49 926 aaPredicted RBP7.49□□□□□ -1.21
ATM-229ENST00000639953 ARHGAP45Q92619 1136 aa7.49□□□□□ -1.21
ATM-229ENST00000639953 KIRREL1Q96J84 757 aa7.49□□□□□ -1.21
ATM-229ENST00000639953 MEIS3Q99687 375 aa7.49□□□□□ -1.21
ATM-229ENST00000639953 RWDD1Q9H446 243 aaPredicted RBP7.49□□□□□ -1.21
ATM-229ENST00000639953 FAM53CQ9NYF3 392 aa7.49□□□□□ -1.21
ATM-229ENST00000639953 NIP7Q9Y221 180 aaKnown RBP eCLIP7.49□□□□□ -1.21
ATM-229ENST00000639953 CD2APQ9Y5K6 639 aa7.49□□□□□ -1.21
ATM-229ENST00000639953 CACNA1SQ13698 1873 aa7.49□□□□□ -1.21
ATM-229ENST00000639953 UTRNP46939 3433 aa7.49□□□□□ -1.21
ATM-229ENST00000639953 PXDNLA1KZ92 1463 aa7.49□□□□□ -1.21
ATM-229ENST00000639953 ANKRD33BA6NCL7 494 aa7.48□□□□□ -1.21
ATM-229ENST00000639953 ERVV-1B6SEH8 477 aa7.48□□□□□ -1.21
ATM-229ENST00000639953 PGRP06401 933 aa7.48□□□□□ -1.21
ATM-229ENST00000639953 COL11A2P13942 1736 aaPredicted RBP7.48□□□□□ -1.21
ATM-229ENST00000639953 DPEP1P16444 411 aa7.48□□□□□ -1.21
ATM-229ENST00000639953 TFE3P19532 575 aaPredicted RBP7.48□□□□□ -1.21
ATM-229ENST00000639953 LMNB1P20700 586 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms