RNA–Protein interactions for RNA: ENST00000639482.1

SPIN3-222, Transcript of spindlin family member 3, human

TSL 3

Gene SPIN3, Length 3,719 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPIN3-222	ENST00000639482	CHRNA5	P30532	468 aa		11.14	□□□□□ -0.63
SPIN3-222	ENST00000639482	TXK	P42681	527 aa		11.14	□□□□□ -0.63
SPIN3-222	ENST00000639482	TUBB4B	P68371	445 aa		11.14	□□□□□ -0.63
SPIN3-222	ENST00000639482	IQCE	Q6IPM2	695 aa		11.14	□□□□□ -0.63
SPIN3-222	ENST00000639482	EPB41L5	Q9HCM4	733 aa		11.14	□□□□□ -0.63
SPIN3-222	ENST00000639482	IL17RB	Q9NRM6	502 aa		11.14	□□□□□ -0.63
SPIN3-222	ENST00000639482	RBM12	Q9NTZ6	932 aa	Known RBP	11.14	□□□□□ -0.63
SPIN3-222	ENST00000639482	FAM196B	A6NMK8	535 aa		11.13	□□□□□ -0.63
SPIN3-222	ENST00000639482	KIF11	P52732	1056 aa		11.13	□□□□□ -0.63
SPIN3-222	ENST00000639482	NAALADL2	Q58DX5	795 aa		11.13	□□□□□ -0.63
SPIN3-222	ENST00000639482	OTUD6B	Q8N6M0	293 aa		11.13	□□□□□ -0.63
SPIN3-222	ENST00000639482	NOC3L	Q8WTT2	800 aa	Known RBP	11.13	□□□□□ -0.63
SPIN3-222	ENST00000639482	CCDC47	Q96A33	483 aa	Known RBP	11.13	□□□□□ -0.63
SPIN3-222	ENST00000639482	RBM17	Q96I25	401 aa	Known RBP	11.13	□□□□□ -0.63
SPIN3-222	ENST00000639482	DNAJC7	Q99615	494 aa		11.13	□□□□□ -0.63
SPIN3-222	ENST00000639482	BRIP1	Q9BX63	1249 aa		11.13	□□□□□ -0.63
SPIN3-222	ENST00000639482	TCP11L1	Q9NUJ3	509 aa		11.13	□□□□□ -0.63
SPIN3-222	ENST00000639482	BRWD3	Q6RI45	1802 aa		11.13	□□□□□ -0.63
SPIN3-222	ENST00000639482	CHD4	Q14839	1912 aa		11.13	□□□□□ -0.63
SPIN3-222	ENST00000639482		A0A087WUV0	522 aa	Predicted RBP	11.13	□□□□□ -0.63
SPIN3-222	ENST00000639482	CARS	P49589	748 aa	Known RBP	11.13	□□□□□ -0.63
SPIN3-222	ENST00000639482	PAPD7	Q5XG87	772 aa	Known RBP	11.13	□□□□□ -0.63
SPIN3-222	ENST00000639482	PPAN	Q9NQ55	473 aa	Known RBP	11.13	□□□□□ -0.63
SPIN3-222	ENST00000639482	RBM28	Q9NW13	759 aa	Known RBP	11.13	□□□□□ -0.63
SPIN3-222	ENST00000639482	PCDHA13	Q9Y5I0	950 aa		11.13	□□□□□ -0.63
SPIN3-222	ENST00000639482	RAD21	O60216	631 aa		11.13	□□□□□ -0.63
SPIN3-222	ENST00000639482	FAM153B	P0C7A2	387 aa		11.13	□□□□□ -0.63
SPIN3-222	ENST00000639482	NNT	Q13423	1086 aa		11.13	□□□□□ -0.63
SPIN3-222	ENST00000639482	FAM153C	Q494X1	144 aa		11.13	□□□□□ -0.63
SPIN3-222	ENST00000639482	CFAP58	Q5T655	872 aa		11.13	□□□□□ -0.63
SPIN3-222	ENST00000639482	CABP7	Q86V35	215 aa		11.13	□□□□□ -0.63
SPIN3-222	ENST00000639482	LRRC15	Q8TF66	581 aa		11.13	□□□□□ -0.63
SPIN3-222	ENST00000639482	OSBPL9	Q96SU4	736 aa		11.13	□□□□□ -0.63
SPIN3-222	ENST00000639482	FAM153A	Q9UHL3	310 aa		11.13	□□□□□ -0.63
SPIN3-222	ENST00000639482	LRRC53	A6NM62	1247 aa		11.12	□□□□□ -0.63
SPIN3-222	ENST00000639482	PPEF1	O14829	653 aa	Predicted RBP	11.12	□□□□□ -0.63
SPIN3-222	ENST00000639482	VAV2	P52735	878 aa		11.12	□□□□□ -0.63
SPIN3-222	ENST00000639482	ZBED6	P86452	979 aa		11.12	□□□□□ -0.63
SPIN3-222	ENST00000639482	CRY2	Q49AN0	593 aa		11.12	□□□□□ -0.63
SPIN3-222	ENST00000639482	P2RX5	Q93086	422 aa		11.12	□□□□□ -0.63
SPIN3-222	ENST00000639482	GJA10	Q969M2	543 aa		11.12	□□□□□ -0.63
SPIN3-222	ENST00000639482	ALS2CR12	Q96Q35	445 aa		11.12	□□□□□ -0.63
SPIN3-222	ENST00000639482	DUSP9	Q99956	384 aa	Known RBP	11.12	□□□□□ -0.63
SPIN3-222	ENST00000639482	SNX12	Q9UMY4	172 aa		11.12	□□□□□ -0.63
SPIN3-222	ENST00000639482	LEMD3	Q9Y2U8	911 aa		11.12	□□□□□ -0.63
SPIN3-222	ENST00000639482	EEF1G	P26641	437 aa	Known RBP	11.12	□□□□□ -0.63
SPIN3-222	ENST00000639482	CACNB1	Q02641	598 aa	Predicted RBP	11.12	□□□□□ -0.63
SPIN3-222	ENST00000639482	PPFIA1	Q13136	1202 aa		11.12	□□□□□ -0.63
SPIN3-222	ENST00000639482	SHROOM1	Q2M3G4	852 aa	Predicted RBP	11.12	□□□□□ -0.63
SPIN3-222	ENST00000639482	RCSD1	Q6JBY9	416 aa		11.12	□□□□□ -0.63
SPIN3-222	ENST00000639482	TTI2	Q6NXR4	508 aa		11.12	□□□□□ -0.63
SPIN3-222	ENST00000639482	CREG2	Q8IUH2	290 aa		11.12	□□□□□ -0.63
SPIN3-222	ENST00000639482	TEX11	Q8IYF3	940 aa		11.12	□□□□□ -0.63
SPIN3-222	ENST00000639482	KRT12	Q99456	494 aa		11.12	□□□□□ -0.63
SPIN3-222	ENST00000639482	ARHGAP20	Q9P2F6	1191 aa		11.12	□□□□□ -0.63
SPIN3-222	ENST00000639482	SALL4	Q9UJQ4	1053 aa		11.12	□□□□□ -0.63
SPIN3-222	ENST00000639482		A0A1B0GUL6	1792 aa		11.12	□□□□□ -0.63
SPIN3-222	ENST00000639482	MARCH6	O60337	910 aa		11.12	□□□□□ -0.63
SPIN3-222	ENST00000639482	SRGN	P10124	158 aa		11.12	□□□□□ -0.63
SPIN3-222	ENST00000639482	SLC1A4	P43007	532 aa		11.12	□□□□□ -0.63
SPIN3-222	ENST00000639482	EN1	Q05925	392 aa	Predicted RBP	11.12	□□□□□ -0.63
SPIN3-222	ENST00000639482	EHHADH	Q08426	723 aa		11.12	□□□□□ -0.63
SPIN3-222	ENST00000639482	CERS5	Q8N5B7	392 aa		11.12	□□□□□ -0.63
SPIN3-222	ENST00000639482	OR2W6P	Q8NHA6	318 aa		11.12	□□□□□ -0.63
SPIN3-222	ENST00000639482	WDR66	Q8TBY9	1149 aa		11.12	□□□□□ -0.63
SPIN3-222	ENST00000639482	ZNF507	Q8TCN5	953 aa		11.12	□□□□□ -0.63
SPIN3-222	ENST00000639482	TNFRSF25	Q93038	417 aa		11.12	□□□□□ -0.63
SPIN3-222	ENST00000639482	ZIM3	Q96PE6	472 aa		11.12	□□□□□ -0.63
SPIN3-222	ENST00000639482	RASSF10	A6NK89	507 aa		11.11	□□□□□ -0.63
SPIN3-222	ENST00000639482	HEXIM1	O94992	359 aa	Known RBP	11.11	□□□□□ -0.63
SPIN3-222	ENST00000639482	LONP1	P36776	959 aa	Known RBP	11.11	□□□□□ -0.63
SPIN3-222	ENST00000639482	AARS	P49588	968 aa	Known RBP eCLIP	11.11	□□□□□ -0.63
SPIN3-222	ENST00000639482	NAPA	P54920	295 aa		11.11	□□□□□ -0.63
SPIN3-222	ENST00000639482	ODF2	Q5BJF6	829 aa		11.11	□□□□□ -0.63
SPIN3-222	ENST00000639482	TTMP	Q5BVD1	217 aa		11.11	□□□□□ -0.63
SPIN3-222	ENST00000639482	PAXIP1	Q6ZW49	1069 aa	Predicted RBP	11.11	□□□□□ -0.63
SPIN3-222	ENST00000639482	PNMA1	Q8ND90	353 aa		11.11	□□□□□ -0.63
SPIN3-222	ENST00000639482	TRIM58	Q8NG06	486 aa		11.11	□□□□□ -0.63
SPIN3-222	ENST00000639482	CDK5RAP3	Q96JB5	506 aa		11.11	□□□□□ -0.63
SPIN3-222	ENST00000639482	RTFDC1	Q9BY42	306 aa	Predicted RBP	11.11	□□□□□ -0.63
SPIN3-222	ENST00000639482	VIPAS39	Q9H9C1	493 aa		11.11	□□□□□ -0.63
SPIN3-222	ENST00000639482	ANAPC4	Q9UJX5	808 aa		11.11	□□□□□ -0.63
SPIN3-222	ENST00000639482	DDX52	Q9Y2R4	599 aa	Known RBP eCLIP	11.11	□□□□□ -0.63
SPIN3-222	ENST00000639482	TSPY3	P0CV98	308 aa		11.11	□□□□□ -0.63
SPIN3-222	ENST00000639482	TSPY8	P0CW00	308 aa		11.11	□□□□□ -0.63
SPIN3-222	ENST00000639482	C12orf60	Q5U649	245 aa		11.11	□□□□□ -0.63
SPIN3-222	ENST00000639482	NELFCD	Q8IXH7	590 aa		11.11	□□□□□ -0.63
SPIN3-222	ENST00000639482	GLIS3	Q8NEA6	775 aa		11.11	□□□□□ -0.63
SPIN3-222	ENST00000639482	JPH2	Q9BR39	696 aa	Predicted RBP	11.11	□□□□□ -0.63
SPIN3-222	ENST00000639482	STIM2	Q9P246	746 aa		11.11	□□□□□ -0.63
SPIN3-222	ENST00000639482	BIN2	Q9UBW5	565 aa	Predicted RBP	11.11	□□□□□ -0.63
SPIN3-222	ENST00000639482	PDS5A	Q29RF7	1337 aa	Known RBP	11.11	□□□□□ -0.63
SPIN3-222	ENST00000639482	ZC3H4	Q9UPT8	1303 aa	Known RBP	11.11	□□□□□ -0.63
SPIN3-222	ENST00000639482		G3V3G9	751 aa		11.11	□□□□□ -0.63
SPIN3-222	ENST00000639482	EIF3H	O15372	352 aa	Known RBP eCLIP	11.11	□□□□□ -0.63
SPIN3-222	ENST00000639482	OPA1	O60313	960 aa		11.11	□□□□□ -0.63
SPIN3-222	ENST00000639482	GLI1	P08151	1106 aa		11.11	□□□□□ -0.63
SPIN3-222	ENST00000639482	CALM1	P0DP23	149 aa		11.11	□□□□□ -0.63
SPIN3-222	ENST00000639482	CALM2	P0DP24	149 aa		11.11	□□□□□ -0.63
SPIN3-222	ENST00000639482	CALM3	P0DP25	149 aa		11.11	□□□□□ -0.63

Retrieved 100 of 20,778 RNA–protein pairs in 23 ms