RNA–Protein interactions for RNA: ENST00000637981.1

CACNA1A-256, Transcript of calcium voltage-gated channel subunit alpha1 A, human

TSL 5

Gene CACNA1A, Length 1,346 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNA1A-256	ENST00000637981	HLA-C	Q95604	372 aa		11.03	□□□□□ -0.64
CACNA1A-256	ENST00000637981	LRFN3	Q9BTN0	628 aa		11.03	□□□□□ -0.64
CACNA1A-256	ENST00000637981	RANBP17	Q9H2T7	1088 aa	Known RBP	11.03	□□□□□ -0.64
CACNA1A-256	ENST00000637981	IL17RB	Q9NRM6	502 aa		11.03	□□□□□ -0.64
CACNA1A-256	ENST00000637981	LOC102724159	A0A0B4J2E5	919 aa		11.02	□□□□□ -0.65
CACNA1A-256	ENST00000637981	RBM47	A0AV96	593 aa	Known RBP	11.02	□□□□□ -0.65
CACNA1A-256	ENST00000637981	ERICH2	A1L162	156 aa		11.02	□□□□□ -0.65
CACNA1A-256	ENST00000637981	NFIB	O00712	420 aa		11.02	□□□□□ -0.65
CACNA1A-256	ENST00000637981	SLC16A2	P36021	539 aa		11.02	□□□□□ -0.65
CACNA1A-256	ENST00000637981	NOV	P48745	357 aa		11.02	□□□□□ -0.65
CACNA1A-256	ENST00000637981	ANAPC15	P60006	121 aa		11.02	□□□□□ -0.65
CACNA1A-256	ENST00000637981	PPP2R5B	Q15173	497 aa		11.02	□□□□□ -0.65
CACNA1A-256	ENST00000637981	PWP2	Q15269	919 aa	Known RBP	11.02	□□□□□ -0.65
CACNA1A-256	ENST00000637981	TMEM31	Q5JXX7	168 aa		11.02	□□□□□ -0.65
CACNA1A-256	ENST00000637981	NFRKB	Q6P4R8	1299 aa		11.02	□□□□□ -0.65
CACNA1A-256	ENST00000637981	TTC14	Q96N46	770 aa		11.02	□□□□□ -0.65
CACNA1A-256	ENST00000637981	UBAC1	Q9BSL1	405 aa		11.02	□□□□□ -0.65
CACNA1A-256	ENST00000637981	MTA3	Q9BTC8	594 aa		11.02	□□□□□ -0.65
CACNA1A-256	ENST00000637981	INCENP	Q9NQS7	918 aa		11.02	□□□□□ -0.65
CACNA1A-256	ENST00000637981	TCP11L1	Q9NUJ3	509 aa		11.02	□□□□□ -0.65
CACNA1A-256	ENST00000637981	ARIH1	Q9Y4X5	557 aa	Predicted RBP	11.02	□□□□□ -0.65
CACNA1A-256	ENST00000637981	TANC1	Q9C0D5	1861 aa		11.01	□□□□□ -0.65
CACNA1A-256	ENST00000637981	PRRC2B	Q5JSZ5	2229 aa	Known RBP	11.01	□□□□□ -0.65
CACNA1A-256	ENST00000637981	NKRF	O15226	690 aa	Known RBP eCLIP	11.01	□□□□□ -0.65
CACNA1A-256	ENST00000637981	KPNA6	O60684	536 aa		11.01	□□□□□ -0.65
CACNA1A-256	ENST00000637981	KDM4A	O75164	1064 aa		11.01	□□□□□ -0.65
CACNA1A-256	ENST00000637981	BAIAP3	O94812	1187 aa		11.01	□□□□□ -0.65
CACNA1A-256	ENST00000637981	CALML3	P27482	149 aa		11.01	□□□□□ -0.65
CACNA1A-256	ENST00000637981	MCM5	P33992	734 aa		11.01	□□□□□ -0.65
CACNA1A-256	ENST00000637981	PDE4D	Q08499	809 aa		11.01	□□□□□ -0.65
CACNA1A-256	ENST00000637981	GRB10	Q13322	594 aa		11.01	□□□□□ -0.65
CACNA1A-256	ENST00000637981	BFSP2	Q13515	415 aa		11.01	□□□□□ -0.65
CACNA1A-256	ENST00000637981	SYDE2	Q5VT97	1194 aa		11.01	□□□□□ -0.65
CACNA1A-256	ENST00000637981	TTBK2	Q6IQ55	1244 aa		11.01	□□□□□ -0.65
CACNA1A-256	ENST00000637981	SLC30A10	Q6XR72	485 aa		11.01	□□□□□ -0.65
CACNA1A-256	ENST00000637981	SPRED2	Q7Z698	418 aa		11.01	□□□□□ -0.65
CACNA1A-256	ENST00000637981	DCAF4	Q8WV16	495 aa		11.01	□□□□□ -0.65
CACNA1A-256	ENST00000637981	KCNB2	Q92953	911 aa		11.01	□□□□□ -0.65
CACNA1A-256	ENST00000637981	NEK1	Q96PY6	1258 aa		11.01	□□□□□ -0.65
CACNA1A-256	ENST00000637981	NOD1	Q9Y239	953 aa		11.01	□□□□□ -0.65
CACNA1A-256	ENST00000637981	COL4A4	P53420	1690 aa	Predicted RBP	11	□□□□□ -0.65
CACNA1A-256	ENST00000637981	SCN10A	Q9Y5Y9	1956 aa		11	□□□□□ -0.65
CACNA1A-256	ENST00000637981	NEDD4	P46934	1319 aa		11	□□□□□ -0.65
CACNA1A-256	ENST00000637981	FRMPD2	Q68DX3	1309 aa	Predicted RBP	11	□□□□□ -0.65
CACNA1A-256	ENST00000637981		A6NJR5	290 aa		11	□□□□□ -0.65
CACNA1A-256	ENST00000637981		B4E1Z4	1266 aa		11	□□□□□ -0.65
CACNA1A-256	ENST00000637981	KCNJ6	P48051	423 aa		11	□□□□□ -0.65
CACNA1A-256	ENST00000637981	CHMP4BP1	P59074	171 aa		11	□□□□□ -0.65
CACNA1A-256	ENST00000637981	PTPN11	Q06124	597 aa	Predicted RBP	11	□□□□□ -0.65
CACNA1A-256	ENST00000637981	BTNL9	Q6UXG8	535 aa		11	□□□□□ -0.65
CACNA1A-256	ENST00000637981	RNF207	Q6ZRF8	634 aa		11	□□□□□ -0.65
CACNA1A-256	ENST00000637981	DGKH	Q86XP1	1220 aa		11	□□□□□ -0.65
CACNA1A-256	ENST00000637981	TMTC2	Q8N394	836 aa		11	□□□□□ -0.65
CACNA1A-256	ENST00000637981	SCFD2	Q8WU76	684 aa		11	□□□□□ -0.65
CACNA1A-256	ENST00000637981	COPS5	Q92905	334 aa		11	□□□□□ -0.65
CACNA1A-256	ENST00000637981	KHSRP	Q92945	711 aa	Known RBP eCLIP	11	□□□□□ -0.65
CACNA1A-256	ENST00000637981	MPHOSPH6	Q99547	160 aa	Known RBP	11	□□□□□ -0.65
CACNA1A-256	ENST00000637981	ZSWIM5	Q9P217	1185 aa		11	□□□□□ -0.65
CACNA1A-256	ENST00000637981	WDR19	Q8NEZ3	1342 aa		10.99	□□□□□ -0.65
CACNA1A-256	ENST00000637981	LPXN	O60711	386 aa		10.99	□□□□□ -0.65
CACNA1A-256	ENST00000637981	PTGIS	Q16647	500 aa		10.99	□□□□□ -0.65
CACNA1A-256	ENST00000637981	BLOC1S2	Q6QNY1	142 aa		10.99	□□□□□ -0.65
CACNA1A-256	ENST00000637981	GDPD5	Q8WTR4	605 aa		10.99	□□□□□ -0.65
CACNA1A-256	ENST00000637981	CLEC4D	Q8WXI8	215 aa		10.99	□□□□□ -0.65
CACNA1A-256	ENST00000637981	TMEM87B	Q96K49	555 aa		10.99	□□□□□ -0.65
CACNA1A-256	ENST00000637981	ZSCAN10	Q96SZ4	725 aa	Predicted RBP	10.99	□□□□□ -0.65
CACNA1A-256	ENST00000637981	ZBED2	Q9BTP6	218 aa		10.99	□□□□□ -0.65
CACNA1A-256	ENST00000637981	BACH2	Q9BYV9	841 aa		10.99	□□□□□ -0.65
CACNA1A-256	ENST00000637981	TM6SF1	Q9BZW5	370 aa		10.99	□□□□□ -0.65
CACNA1A-256	ENST00000637981	GPCPD1	Q9NPB8	672 aa		10.99	□□□□□ -0.65
CACNA1A-256	ENST00000637981	SNX14	Q9Y5W7	946 aa		10.99	□□□□□ -0.65
CACNA1A-256	ENST00000637981	NCOR1	O75376	2440 aa		10.98	□□□□□ -0.65
CACNA1A-256	ENST00000637981	LCHN	A4D1U4	455 aa		10.98	□□□□□ -0.65
CACNA1A-256	ENST00000637981	FAM86C2P	A6NEL3	165 aa		10.98	□□□□□ -0.65
CACNA1A-256	ENST00000637981	IFIT3	O14879	490 aa	Known RBP	10.98	□□□□□ -0.65
CACNA1A-256	ENST00000637981	GPR37L1	O60883	481 aa		10.98	□□□□□ -0.65
CACNA1A-256	ENST00000637981	TXN	P10599	105 aa	Known RBP	10.98	□□□□□ -0.65
CACNA1A-256	ENST00000637981	TOP1	P11387	765 aa	Known RBP	10.98	□□□□□ -0.65
CACNA1A-256	ENST00000637981	EDNRB	P24530	442 aa		10.98	□□□□□ -0.65
CACNA1A-256	ENST00000637981	WDR5	P61964	334 aa	Known RBP	10.98	□□□□□ -0.65
CACNA1A-256	ENST00000637981	RPS6	P62753	249 aa	Known RBP	10.98	□□□□□ -0.65
CACNA1A-256	ENST00000637981	STOX1	Q6ZVD7	989 aa		10.98	□□□□□ -0.65
CACNA1A-256	ENST00000637981	DHX32	Q7L7V1	743 aa	Known RBP	10.98	□□□□□ -0.65
CACNA1A-256	ENST00000637981	TMCO2	Q7Z6W1	182 aa	Predicted RBP	10.98	□□□□□ -0.65
CACNA1A-256	ENST00000637981	MB21D2	Q8IYB1	491 aa	Predicted RBP	10.98	□□□□□ -0.65
CACNA1A-256	ENST00000637981	RASEF	Q8IZ41	740 aa		10.98	□□□□□ -0.65
CACNA1A-256	ENST00000637981	CCDC155	Q8N6L0	562 aa		10.98	□□□□□ -0.65
CACNA1A-256	ENST00000637981	DNER	Q8NFT8	737 aa		10.98	□□□□□ -0.65
CACNA1A-256	ENST00000637981	CAGE1	Q8TC20	777 aa		10.98	□□□□□ -0.65
CACNA1A-256	ENST00000637981	AFAP1L1	Q8TED9	768 aa		10.98	□□□□□ -0.65
CACNA1A-256	ENST00000637981	JAKMIP1	Q96N16	626 aa	Known RBP	10.98	□□□□□ -0.65
CACNA1A-256	ENST00000637981	C22orf23	Q9BZE7	217 aa		10.98	□□□□□ -0.65
CACNA1A-256	ENST00000637981	C11orf16	Q9NQ32	467 aa		10.98	□□□□□ -0.65
CACNA1A-256	ENST00000637981	PTPRS	Q13332	1948 aa		10.98	□□□□□ -0.65
CACNA1A-256	ENST00000637981		B4DLN1	442 aa		10.97	□□□□□ -0.65
CACNA1A-256	ENST00000637981	PI4K2B	G5E9Z4	385 aa		10.97	□□□□□ -0.65
CACNA1A-256	ENST00000637981	PRC1	O43663	620 aa		10.97	□□□□□ -0.65
CACNA1A-256	ENST00000637981	ARIH2	O95376	493 aa		10.97	□□□□□ -0.65
CACNA1A-256	ENST00000637981	SEC24B	O95487	1268 aa		10.97	□□□□□ -0.65
CACNA1A-256	ENST00000637981	MRPL12	P52815	198 aa	Known RBP	10.97	□□□□□ -0.65

Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms