RNA–Protein interactions for RNA: ENST00000637552.1

CHRNA7-229, Transcript of cholinergic receptor nicotinic alpha 7 subunit, humanhuman

TSL 5

Gene CHRNA7, Length 955 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA7-229ENST00000637552 PIGSQ96S52 555 aa26.45■■□□□ 1.82
CHRNA7-229ENST00000637552 SENP2Q9HC62 589 aa26.45■■□□□ 1.82
CHRNA7-229ENST00000637552 RBM8AQ9Y5S9 174 aaKnown RBP26.45■■□□□ 1.82
CHRNA7-229ENST00000637552 ZBBXA8MT70 800 aa26.44■■□□□ 1.82
CHRNA7-229ENST00000637552 PFKMP08237 780 aa26.44■■□□□ 1.82
CHRNA7-229ENST00000637552 CASTP20810 708 aaKnown RBP26.44■■□□□ 1.82
CHRNA7-229ENST00000637552 HOXA13P31271 388 aaPredicted RBP26.44■■□□□ 1.82
CHRNA7-229ENST00000637552 TROAPQ12815 778 aa26.44■■□□□ 1.82
CHRNA7-229ENST00000637552 SAMD3Q8N6K7 520 aa26.44■■□□□ 1.82
CHRNA7-229ENST00000637552 PDCD2LQ9BRP1 358 aa26.44■■□□□ 1.82
CHRNA7-229ENST00000637552 RIOX1Q9H6W3 641 aa26.44■■□□□ 1.82
CHRNA7-229ENST00000637552 DDX41Q9UJV9 622 aaKnown RBP26.44■■□□□ 1.82
CHRNA7-229ENST00000637552 EYSQ5T1H1 3165 aa26.43■■□□□ 1.82
CHRNA7-229ENST00000637552 MYCLP12524 364 aaPredicted RBP26.43■■□□□ 1.82
CHRNA7-229ENST00000637552 DEFB128Q7Z7B8 93 aa26.43■■□□□ 1.82
CHRNA7-229ENST00000637552 RETREG2Q8NC44 543 aa26.43■■□□□ 1.82
CHRNA7-229ENST00000637552 SLC4A7Q9Y6M7 1214 aa26.43■■□□□ 1.82
CHRNA7-229ENST00000637552 PITPNM1O00562 1244 aa26.42■■□□□ 1.82
CHRNA7-229ENST00000637552 BFSP2Q13515 415 aa26.42■■□□□ 1.82
CHRNA7-229ENST00000637552 DGKDQ16760 1214 aa26.42■■□□□ 1.82
CHRNA7-229ENST00000637552 SLC35G1Q2M3R5 365 aa26.42■■□□□ 1.82
CHRNA7-229ENST00000637552 MB21D2Q8IYB1 491 aaPredicted RBP26.42■■□□□ 1.82
CHRNA7-229ENST00000637552 GBF1Q92538 1859 aa26.42■■□□□ 1.82
CHRNA7-229ENST00000637552 SCN5AQ14524 2016 aa26.41■■□□□ 1.82
CHRNA7-229ENST00000637552 TANC1Q9C0D5 1861 aa26.41■■□□□ 1.82
CHRNA7-229ENST00000637552 PNMA6FA0A0J9YX94 578 aa26.41■■□□□ 1.82
CHRNA7-229ENST00000637552 GCOM1H8Y6P7 765 aaPredicted RBP26.41■■□□□ 1.82
CHRNA7-229ENST00000637552 POLR2MP0CAP2 368 aa26.41■■□□□ 1.82
CHRNA7-229ENST00000637552 RFC2P35250 354 aa26.41■■□□□ 1.82
CHRNA7-229ENST00000637552 ANTXR2P58335 489 aa26.41■■□□□ 1.82
CHRNA7-229ENST00000637552 LAMC2Q13753 1193 aa26.41■■□□□ 1.82
CHRNA7-229ENST00000637552 CASC1Q6TDU7 716 aa26.41■■□□□ 1.82
CHRNA7-229ENST00000637552 DHX37Q8IY37 1157 aaKnown RBP26.41■■□□□ 1.82
CHRNA7-229ENST00000637552 EMID1Q96A84 441 aaPredicted RBP26.41■■□□□ 1.82
CHRNA7-229ENST00000637552 MYH7BA7E2Y1 1941 aa26.4■■□□□ 1.82
CHRNA7-229ENST00000637552 CYTH3O43739 400 aa26.4■■□□□ 1.82
CHRNA7-229ENST00000637552 PGM5Q15124 567 aa26.4■■□□□ 1.82
CHRNA7-229ENST00000637552 PTGISQ16647 500 aa26.4■■□□□ 1.82
CHRNA7-229ENST00000637552 KCNV1Q6PIU1 500 aa26.4■■□□□ 1.82
CHRNA7-229ENST00000637552 CCDC155Q8N6L0 562 aa26.4■■□□□ 1.82
CHRNA7-229ENST00000637552 GAS2L1Q99501 681 aaPredicted RBP26.4■■□□□ 1.82
CHRNA7-229ENST00000637552 SLC28A3Q9HAS3 691 aa26.4■■□□□ 1.82
CHRNA7-229ENST00000637552 ACTN1P12814 892 aa26.39■■□□□ 1.82
CHRNA7-229ENST00000637552 CCND2P30279 289 aa26.39■■□□□ 1.82
CHRNA7-229ENST00000637552 FCHSD1Q86WN1 690 aa26.39■■□□□ 1.82
CHRNA7-229ENST00000637552 PPTC7Q8NI37 304 aa26.39■■□□□ 1.82
CHRNA7-229ENST00000637552 CTCFLQ8NI51 663 aaPredicted RBP26.39■■□□□ 1.82
CHRNA7-229ENST00000637552 IGDCC4Q8TDY8 1250 aa26.39■■□□□ 1.82
CHRNA7-229ENST00000637552 PIBF1Q8WXW3 757 aa26.39■■□□□ 1.82
CHRNA7-229ENST00000637552 KAT2BQ92831 832 aa26.39■■□□□ 1.82
CHRNA7-229ENST00000637552 KATNAL1Q9BW62 490 aa26.39■■□□□ 1.82
CHRNA7-229ENST00000637552 NKX2-4Q9H2Z4 354 aa26.39■■□□□ 1.82
CHRNA7-229ENST00000637552 VSIG10LQ86VR7 867 aa26.38■■□□□ 1.81
CHRNA7-229ENST00000637552 SESTD1Q86VW0 696 aa26.38■■□□□ 1.81
CHRNA7-229ENST00000637552 ZNF654Q8IZM8 581 aa26.38■■□□□ 1.81
CHRNA7-229ENST00000637552 VWCEQ96DN2 955 aa26.38■■□□□ 1.81
CHRNA7-229ENST00000637552 PRDM12Q9H4Q4 367 aa26.38■■□□□ 1.81
CHRNA7-229ENST00000637552 LY9Q9HBG7 655 aa26.38■■□□□ 1.81
CHRNA7-229ENST00000637552 PRC1O43663 620 aa26.37■■□□□ 1.81
CHRNA7-229ENST00000637552 DDAH1O94760 285 aa26.37■■□□□ 1.81
CHRNA7-229ENST00000637552 IQCF3P0C7M6 154 aa26.37■■□□□ 1.81
CHRNA7-229ENST00000637552 ATP2A2P16615 1042 aaKnown RBP26.37■■□□□ 1.81
CHRNA7-229ENST00000637552 KIF5BP33176 963 aa26.37■■□□□ 1.81
CHRNA7-229ENST00000637552 GDF6Q6KF10 455 aaPredicted RBP26.37■■□□□ 1.81
CHRNA7-229ENST00000637552 C7orf31Q8N865 590 aa26.37■■□□□ 1.81
CHRNA7-229ENST00000637552 IL31RAQ8NI17 732 aa26.37■■□□□ 1.81
CHRNA7-229ENST00000637552 CAGE1Q8TC20 777 aa26.37■■□□□ 1.81
CHRNA7-229ENST00000637552 FTOQ9C0B1 505 aaKnown RBP eCLIP26.37■■□□□ 1.81
CHRNA7-229ENST00000637552 YBX2Q9Y2T7 364 aaKnown RBP26.37■■□□□ 1.81
CHRNA7-229ENST00000637552 PRUNE2Q8WUY3 3088 aa26.37■■□□□ 1.81
CHRNA7-229ENST00000637552 TRIP12Q14669 1992 aaPredicted RBP26.37■■□□□ 1.81
CHRNA7-229ENST00000637552 RGS20O76081 388 aa26.36■■□□□ 1.81
CHRNA7-229ENST00000637552 ZNF286BP0CG31 522 aa26.36■■□□□ 1.81
CHRNA7-229ENST00000637552 MCM5P33992 734 aa26.36■■□□□ 1.81
CHRNA7-229ENST00000637552 PSEN2P49810 448 aa26.36■■□□□ 1.81
CHRNA7-229ENST00000637552 RABGGTBP53611 331 aa26.36■■□□□ 1.81
CHRNA7-229ENST00000637552 NFXL1Q6ZNB6 911 aa26.36■■□□□ 1.81
CHRNA7-229ENST00000637552 MAP3K14Q99558 947 aa26.36■■□□□ 1.81
CHRNA7-229ENST00000637552 ALG1Q9BT22 464 aa26.36■■□□□ 1.81
CHRNA7-229ENST00000637552 MTA3Q9BTC8 594 aa26.36■■□□□ 1.81
CHRNA7-229ENST00000637552 MYL10Q9BUA6 226 aa26.36■■□□□ 1.81
CHRNA7-229ENST00000637552 LSG1Q9H089 658 aaKnown RBP26.36■■□□□ 1.81
CHRNA7-229ENST00000637552 CHD9Q3L8U1 2897 aa26.36■■□□□ 1.81
CHRNA7-229ENST00000637552 SORBS3O60504 671 aa26.35■■□□□ 1.81
CHRNA7-229ENST00000637552 GGPS1O95749 300 aa26.35■■□□□ 1.81
CHRNA7-229ENST00000637552 MFSD10Q14728 455 aa26.35■■□□□ 1.81
CHRNA7-229ENST00000637552 AFAP1L1Q8TED9 768 aa26.35■■□□□ 1.81
CHRNA7-229ENST00000637552 RRP36Q96EU6 259 aaKnown RBP26.35■■□□□ 1.81
CHRNA7-229ENST00000637552 SPATA33Q96N06 139 aa26.35■■□□□ 1.81
CHRNA7-229ENST00000637552 ESYT1Q9BSJ8 1104 aa26.35■■□□□ 1.81
CHRNA7-229ENST00000637552 SPZ1Q9BXG8 430 aa26.35■■□□□ 1.81
CHRNA7-229ENST00000637552 COL25A1Q9BXS0 654 aaPredicted RBP26.35■■□□□ 1.81
CHRNA7-229ENST00000637552 SEC63Q9UGP8 760 aaKnown RBP26.35■■□□□ 1.81
CHRNA7-229ENST00000637552 GTF2IRD1Q9UHL9 959 aa26.35■■□□□ 1.81
CHRNA7-229ENST00000637552 PCDHA11Q9Y5I1 949 aa26.35■■□□□ 1.81
CHRNA7-229ENST00000637552 CCDC69A6NI79 296 aa26.34■■□□□ 1.81
CHRNA7-229ENST00000637552 F2P00734 622 aa26.34■■□□□ 1.81
CHRNA7-229ENST00000637552 TGFB3P10600 412 aa26.34■■□□□ 1.81
CHRNA7-229ENST00000637552 UBA1P22314 1058 aaKnown RBP26.34■■□□□ 1.81
CHRNA7-229ENST00000637552 KIAA0753Q2KHM9 967 aa26.34■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms