RNA–Protein interactions for RNA: ENST00000637156.1

CLN8-213, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLN8, Length 1,897 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-213ENST00000637156 AK8Q96MA6 479 aa23.82■■□□□ 1.4
CLN8-213ENST00000637156 PCDHA12Q9UN75 941 aa23.82■■□□□ 1.4
CLN8-213ENST00000637156 TESPA1A2RU30 521 aaPredicted RBP23.81■■□□□ 1.4
CLN8-213ENST00000637156 MEIS1O00470 390 aa23.81■■□□□ 1.4
CLN8-213ENST00000637156 MSH4O15457 936 aa23.81■■□□□ 1.4
CLN8-213ENST00000637156 NCAPG2Q86XI2 1143 aa23.81■■□□□ 1.4
CLN8-213ENST00000637156 ERCC4Q92889 916 aaPredicted RBP23.81■■□□□ 1.4
CLN8-213ENST00000637156 MAF1Q9H063 256 aa23.81■■□□□ 1.4
CLN8-213ENST00000637156 FRMPD4Q14CM0 1322 aa23.81■■□□□ 1.4
CLN8-213ENST00000637156 TBX3O15119 743 aa23.81■■□□□ 1.4
CLN8-213ENST00000637156 CTAGE5O15320 804 aa23.81■■□□□ 1.4
CLN8-213ENST00000637156 MARCH6O60337 910 aa23.81■■□□□ 1.4
CLN8-213ENST00000637156 ERCC3P19447 782 aa23.81■■□□□ 1.4
CLN8-213ENST00000637156 EIF2AK2P19525 551 aaKnown RBP23.81■■□□□ 1.4
CLN8-213ENST00000637156 MRPS9P82933 396 aaKnown RBP23.81■■□□□ 1.4
CLN8-213ENST00000637156 CCSER1Q9C0I3 900 aa23.81■■□□□ 1.4
CLN8-213ENST00000637156 PXMP2Q9NR77 195 aa23.81■■□□□ 1.4
CLN8-213ENST00000637156 SERTAD1Q9UHV2 236 aa23.81■■□□□ 1.4
CLN8-213ENST00000637156 TLL2Q9Y6L7 1015 aa23.81■■□□□ 1.4
CLN8-213ENST00000637156 TRPM7Q96QT4 1865 aa23.8■■□□□ 1.4
CLN8-213ENST00000637156 ITGB5P18084 799 aa23.8■■□□□ 1.4
CLN8-213ENST00000637156 UBA7P41226 1012 aa23.8■■□□□ 1.4
CLN8-213ENST00000637156 PGM5Q15124 567 aa23.8■■□□□ 1.4
CLN8-213ENST00000637156 PCNX4Q63HM2 1172 aa23.8■■□□□ 1.4
CLN8-213ENST00000637156 CNNM3Q8NE01 707 aa23.8■■□□□ 1.4
CLN8-213ENST00000637156 PDCD2LQ9BRP1 358 aa23.8■■□□□ 1.4
CLN8-213ENST00000637156 FUCA2Q9BTY2 467 aa23.8■■□□□ 1.4
CLN8-213ENST00000637156 MMTAG2Q9BU76 263 aaKnown RBP23.8■■□□□ 1.4
CLN8-213ENST00000637156 FBXO40Q9UH90 709 aa23.8■■□□□ 1.4
CLN8-213ENST00000637156 ACTN4O43707 911 aaKnown RBP23.79■■□□□ 1.4
CLN8-213ENST00000637156 TOMM70O94826 608 aa23.79■■□□□ 1.4
CLN8-213ENST00000637156 SLC25A27O95847 323 aa23.79■■□□□ 1.4
CLN8-213ENST00000637156 ARHGEF16Q5VV41 709 aa23.79■■□□□ 1.4
CLN8-213ENST00000637156 ANKRD35Q8N283 1001 aa23.79■■□□□ 1.4
CLN8-213ENST00000637156 DHX58Q96C10 678 aa23.79■■□□□ 1.4
CLN8-213ENST00000637156 FAM20AQ96MK3 541 aa23.79■■□□□ 1.4
CLN8-213ENST00000637156 MXRA8Q9BRK3 442 aa23.79■■□□□ 1.4
CLN8-213ENST00000637156 LRWD1Q9UFC0 647 aa23.79■■□□□ 1.4
CLN8-213ENST00000637156 A0A0G2JMZ2 1700 aa23.79■■□□□ 1.4
CLN8-213ENST00000637156 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP23.79■■□□□ 1.4
CLN8-213ENST00000637156 POTEMA6NI47 508 aa23.79■■□□□ 1.4
CLN8-213ENST00000637156 ERVK-9P63128 1117 aa23.79■■□□□ 1.4
CLN8-213ENST00000637156 ERVK-24P63145 666 aa23.79■■□□□ 1.4
CLN8-213ENST00000637156 MDM2Q00987 491 aaPredicted RBP23.79■■□□□ 1.4
CLN8-213ENST00000637156 KARSQ15046 597 aaKnown RBP23.79■■□□□ 1.4
CLN8-213ENST00000637156 E2F4Q16254 413 aa23.79■■□□□ 1.4
CLN8-213ENST00000637156 TMEM266Q2M3C6 531 aa23.79■■□□□ 1.4
CLN8-213ENST00000637156 PLA2G4DQ86XP0 818 aa23.79■■□□□ 1.4
CLN8-213ENST00000637156 SLFN12Q8IYM2 578 aa23.79■■□□□ 1.4
CLN8-213ENST00000637156 SMCR8Q8TEV9 937 aaPredicted RBP23.79■■□□□ 1.4
CLN8-213ENST00000637156 FOXN1O15353 648 aa23.78■■□□□ 1.4
CLN8-213ENST00000637156 ARP10275 920 aa23.78■■□□□ 1.4
CLN8-213ENST00000637156 ELOA2Q8IYF1 753 aaPredicted RBP23.78■■□□□ 1.4
CLN8-213ENST00000637156 SLFN14P0C7P3 912 aa23.77■■□□□ 1.4
CLN8-213ENST00000637156 VSIG10LQ86VR7 867 aa23.77■■□□□ 1.4
CLN8-213ENST00000637156 NSUN6Q8TEA1 469 aaKnown RBP23.77■■□□□ 1.4
CLN8-213ENST00000637156 UBIAD1Q9Y5Z9 338 aa23.77■■□□□ 1.4
CLN8-213ENST00000637156 CNTN2Q02246 1040 aa23.77■■□□□ 1.4
CLN8-213ENST00000637156 CABP7Q86V35 215 aa23.77■■□□□ 1.4
CLN8-213ENST00000637156 ANKRD13CQ8N6S4 541 aa23.77■■□□□ 1.4
CLN8-213ENST00000637156 IQUBQ8NA54 791 aa23.77■■□□□ 1.4
CLN8-213ENST00000637156 GTF3C2Q8WUA4 911 aaPredicted RBP23.77■■□□□ 1.4
CLN8-213ENST00000637156 NUDT12Q9BQG2 462 aa23.77■■□□□ 1.4
CLN8-213ENST00000637156 RAB34Q9BZG1 259 aa23.77■■□□□ 1.4
CLN8-213ENST00000637156 WDR11Q9BZH6 1224 aa23.77■■□□□ 1.4
CLN8-213ENST00000637156 KIAA1468Q9P260 1216 aa23.77■■□□□ 1.4
CLN8-213ENST00000637156 FAM155AB1AL88 458 aaPredicted RBP23.76■■□□□ 1.39
CLN8-213ENST00000637156 NR3C2P08235 984 aa23.76■■□□□ 1.39
CLN8-213ENST00000637156 MYCLP12524 364 aaPredicted RBP23.76■■□□□ 1.39
CLN8-213ENST00000637156 TXLNAP40222 546 aa23.76■■□□□ 1.39
CLN8-213ENST00000637156 SPIRE1Q08AE8 756 aa23.76■■□□□ 1.39
CLN8-213ENST00000637156 GPRC5AQ8NFJ5 357 aa23.76■■□□□ 1.39
CLN8-213ENST00000637156 DISC1Q9NRI5 854 aa23.76■■□□□ 1.39
CLN8-213ENST00000637156 FSD2A1L4K1 749 aa23.75■■□□□ 1.39
CLN8-213ENST00000637156 TMEM88BA6NKF7 163 aa23.75■■□□□ 1.39
CLN8-213ENST00000637156 SLC10A3P09131 477 aa23.75■■□□□ 1.39
CLN8-213ENST00000637156 NAALADL2Q58DX5 795 aa23.75■■□□□ 1.39
CLN8-213ENST00000637156 PLIN2Q99541 437 aa23.75■■□□□ 1.39
CLN8-213ENST00000637156 PORCNQ9H237 461 aa23.75■■□□□ 1.39
CLN8-213ENST00000637156 ABT1Q9ULW3 272 aaKnown RBP23.75■■□□□ 1.39
CLN8-213ENST00000637156 ASTN1O14525 1302 aa23.75■■□□□ 1.39
CLN8-213ENST00000637156 PFASO15067 1338 aa23.75■■□□□ 1.39
CLN8-213ENST00000637156 MANSC4A6NHS7 340 aaPredicted RBP23.75■■□□□ 1.39
CLN8-213ENST00000637156 IGF2BP3O00425 579 aaKnown RBP eCLIP23.75■■□□□ 1.39
CLN8-213ENST00000637156 BCRP11274 1271 aa23.75■■□□□ 1.39
CLN8-213ENST00000637156 PNOCQ13519 176 aa23.75■■□□□ 1.39
CLN8-213ENST00000637156 ZRSR1Q15695 479 aaKnown RBP23.75■■□□□ 1.39
CLN8-213ENST00000637156 SH3RF1Q7Z6J0 888 aa23.75■■□□□ 1.39
CLN8-213ENST00000637156 GRAMD1CQ8IYS0 662 aa23.75■■□□□ 1.39
CLN8-213ENST00000637156 LRRC15Q8TF66 581 aa23.75■■□□□ 1.39
CLN8-213ENST00000637156 SLC5A5Q92911 643 aa23.75■■□□□ 1.39
CLN8-213ENST00000637156 JADE2Q9NQC1 790 aa23.75■■□□□ 1.39
CLN8-213ENST00000637156 KCNH7Q9NS40 1196 aa23.75■■□□□ 1.39
CLN8-213ENST00000637156 GCLCP48506 637 aaPredicted RBP23.74■■□□□ 1.39
CLN8-213ENST00000637156 PDXDC2PQ6P474 469 aa23.74■■□□□ 1.39
CLN8-213ENST00000637156 DHX30Q7L2E3 1194 aaKnown RBP eCLIP23.74■■□□□ 1.39
CLN8-213ENST00000637156 NIPA1Q7RTP0 329 aa23.74■■□□□ 1.39
CLN8-213ENST00000637156 PAGE5Q96GU1 130 aa23.74■■□□□ 1.39
CLN8-213ENST00000637156 PYM1Q9BRP8 204 aaKnown RBP23.74■■□□□ 1.39
CLN8-213ENST00000637156 MROH8Q9H579 483 aa23.74■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms