RNA–Protein interactions for RNA: ENST00000636840.1

PNKP-226, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 117 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-226ENST00000636840 CPT1AP50416 773 aa9.41□□□□□ -0.9
PNKP-226ENST00000636840 GJA9P57773 515 aa9.41□□□□□ -0.9
PNKP-226ENST00000636840 SCRN1Q12765 414 aa9.41□□□□□ -0.9
PNKP-226ENST00000636840 TRIM29Q14134 588 aa9.41□□□□□ -0.9
PNKP-226ENST00000636840 PKN1Q16512 942 aa9.41□□□□□ -0.9
PNKP-226ENST00000636840 ME3Q16798 604 aa9.41□□□□□ -0.9
PNKP-226ENST00000636840 TBC1D32Q96NH3 1257 aa9.41□□□□□ -0.9
PNKP-226ENST00000636840 SENP6Q9GZR1 1112 aaPredicted RBP9.41□□□□□ -0.9
PNKP-226ENST00000636840 ZMYND12Q9H0C1 365 aa9.41□□□□□ -0.9
PNKP-226ENST00000636840 BRMS1Q9HCU9 246 aa9.41□□□□□ -0.9
PNKP-226ENST00000636840 PDGFCQ9NRA1 345 aa9.41□□□□□ -0.9
PNKP-226ENST00000636840 COL20A1Q9P218 1284 aa9.41□□□□□ -0.9
PNKP-226ENST00000636840 ORC3Q9UBD5 711 aaPredicted RBP9.41□□□□□ -0.9
PNKP-226ENST00000636840 KIF3AQ9Y496 699 aa9.41□□□□□ -0.9
PNKP-226ENST00000636840 MRVI1Q9Y6F6 885 aa9.41□□□□□ -0.9
PNKP-226ENST00000636840 ASTN1O14525 1302 aa9.4□□□□□ -0.9
PNKP-226ENST00000636840 GH1P01241 217 aa9.4□□□□□ -0.9
PNKP-226ENST00000636840 SMPD1P17405 629 aa9.4□□□□□ -0.9
PNKP-226ENST00000636840 LAMC2Q13753 1193 aa9.4□□□□□ -0.9
PNKP-226ENST00000636840 NEDD9Q14511 834 aa9.4□□□□□ -0.9
PNKP-226ENST00000636840 KCNA10Q16322 511 aa9.4□□□□□ -0.9
PNKP-226ENST00000636840 UBE2SQ16763 222 aa9.4□□□□□ -0.9
PNKP-226ENST00000636840 PCNX4Q63HM2 1172 aa9.4□□□□□ -0.9
PNKP-226ENST00000636840 TLK2Q86UE8 772 aa9.4□□□□□ -0.9
PNKP-226ENST00000636840 DHX37Q8IY37 1157 aaKnown RBP9.4□□□□□ -0.9
PNKP-226ENST00000636840 REXO1Q8N1G1 1221 aaKnown RBP9.4□□□□□ -0.9
PNKP-226ENST00000636840 NECAB1Q8N987 351 aa9.4□□□□□ -0.9
PNKP-226ENST00000636840 FAM184AQ8NB25 1140 aa9.4□□□□□ -0.9
PNKP-226ENST00000636840 GIMAP8Q8ND71 665 aaPredicted RBP9.4□□□□□ -0.9
PNKP-226ENST00000636840 OR6J1Q8NGC5 347 aa9.4□□□□□ -0.9
PNKP-226ENST00000636840 GTF3C6Q969F1 213 aa9.4□□□□□ -0.9
PNKP-226ENST00000636840 SHISA4Q96DD7 197 aa9.4□□□□□ -0.9
PNKP-226ENST00000636840 GLT1D1Q96MS3 346 aa9.4□□□□□ -0.9
PNKP-226ENST00000636840 LLPHQ9BRT6 129 aaKnown RBP9.4□□□□□ -0.9
PNKP-226ENST00000636840 SEZ6LQ9BYH1 1024 aa9.4□□□□□ -0.9
PNKP-226ENST00000636840 KATNBL1Q9H079 304 aa9.4□□□□□ -0.9
PNKP-226ENST00000636840 MLXIPQ9HAP2 919 aa9.4□□□□□ -0.9
PNKP-226ENST00000636840 POLR3EQ9NVU0 708 aa9.4□□□□□ -0.9
PNKP-226ENST00000636840 RTEL1Q9NZ71 1219 aa9.4□□□□□ -0.9
PNKP-226ENST00000636840 GNEQ9Y223 722 aaKnown RBP9.4□□□□□ -0.9
PNKP-226ENST00000636840 HTTP42858 3142 aa9.39□□□□□ -0.91
PNKP-226ENST00000636840 STK36Q9NRP7 1315 aa9.39□□□□□ -0.91
PNKP-226ENST00000636840 C11orf97A0A1B0GVM6 126 aaPredicted RBP9.39□□□□□ -0.91
PNKP-226ENST00000636840 FIBPO43427 364 aa9.39□□□□□ -0.91
PNKP-226ENST00000636840 EVI5O60447 810 aa9.39□□□□□ -0.91
PNKP-226ENST00000636840 PPFIA3O75145 1194 aa9.39□□□□□ -0.91
PNKP-226ENST00000636840 ADAMTS4O75173 837 aa9.39□□□□□ -0.91
PNKP-226ENST00000636840 CST5P28325 142 aaPredicted RBP9.39□□□□□ -0.91
PNKP-226ENST00000636840 ACLYP53396 1101 aa9.39□□□□□ -0.91
PNKP-226ENST00000636840 HMGN5P82970 282 aaKnown RBP9.39□□□□□ -0.91
PNKP-226ENST00000636840 FSCN1Q16658 493 aaKnown RBP9.39□□□□□ -0.91
PNKP-226ENST00000636840 JAKMIP3Q5VZ66 844 aa9.39□□□□□ -0.91
PNKP-226ENST00000636840 KLHDC9Q8NEP7 349 aa9.39□□□□□ -0.91
PNKP-226ENST00000636840 GPRASP2Q96D09 838 aa9.39□□□□□ -0.91
PNKP-226ENST00000636840 KIF2CQ99661 725 aa9.39□□□□□ -0.91
PNKP-226ENST00000636840 ALG1Q9BT22 464 aa9.39□□□□□ -0.91
PNKP-226ENST00000636840 ANO3Q9BYT9 981 aa9.39□□□□□ -0.91
PNKP-226ENST00000636840 UPF3AQ9H1J1 476 aaKnown RBP9.39□□□□□ -0.91
PNKP-226ENST00000636840 STARD7Q9NQZ5 370 aa9.39□□□□□ -0.91
PNKP-226ENST00000636840 VPS54Q9P1Q0 977 aa9.39□□□□□ -0.91
PNKP-226ENST00000636840 ELP1O95163 1332 aa9.38□□□□□ -0.91
PNKP-226ENST00000636840 SYNRGQ9UMZ2 1314 aa9.38□□□□□ -0.91
PNKP-226ENST00000636840 CENPFP49454 3210 aa9.38□□□□□ -0.91
PNKP-226ENST00000636840 MCM3APO60318 1980 aa9.38□□□□□ -0.91
PNKP-226ENST00000636840 ASGR1P07306 291 aa9.38□□□□□ -0.91
PNKP-226ENST00000636840 ICAM3P32942 547 aa9.38□□□□□ -0.91
PNKP-226ENST00000636840 NKX3-2P78367 333 aa9.38□□□□□ -0.91
PNKP-226ENST00000636840 SAFBQ15424 915 aaKnown RBP eCLIP9.38□□□□□ -0.91
PNKP-226ENST00000636840 LY6KQ17RY6 165 aa9.38□□□□□ -0.91
PNKP-226ENST00000636840 TYW1BQ6NUM6 668 aa9.38□□□□□ -0.91
PNKP-226ENST00000636840 CCDC62Q6P9F0 684 aa9.38□□□□□ -0.91
PNKP-226ENST00000636840 SLC39A5Q6ZMH5 540 aa9.38□□□□□ -0.91
PNKP-226ENST00000636840 UBE2Q1Q7Z7E8 422 aa9.38□□□□□ -0.91
PNKP-226ENST00000636840 CCDC83Q8IWF9 413 aa9.38□□□□□ -0.91
PNKP-226ENST00000636840 BLIDQ8IZY5 108 aa9.38□□□□□ -0.91
PNKP-226ENST00000636840 FERMT2Q96AC1 680 aa9.38□□□□□ -0.91
PNKP-226ENST00000636840 INPP4AQ96PE3 977 aaPredicted RBP9.38□□□□□ -0.91
PNKP-226ENST00000636840 SENP7Q9BQF6 1050 aa9.38□□□□□ -0.91
PNKP-226ENST00000636840 PRKAG2Q9UGJ0 569 aa9.38□□□□□ -0.91
PNKP-226ENST00000636840 TCEAL9Q9UHQ7 104 aa9.38□□□□□ -0.91
PNKP-226ENST00000636840 DDX41Q9UJV9 622 aaKnown RBP9.38□□□□□ -0.91
PNKP-226ENST00000636840 PCDHA4Q9UN74 947 aa9.38□□□□□ -0.91
PNKP-226ENST00000636840 PHF24Q9UPV7 400 aa9.38□□□□□ -0.91
PNKP-226ENST00000636840 DDX49Q9Y6V7 483 aaKnown RBP9.38□□□□□ -0.91
PNKP-226ENST00000636840 FRMPD4Q14CM0 1322 aa9.37□□□□□ -0.91
PNKP-226ENST00000636840 CCDC194A0A1B0GVG4 234 aa9.37□□□□□ -0.91
PNKP-226ENST00000636840 A6NJR5 290 aa9.37□□□□□ -0.91
PNKP-226ENST00000636840 DCDC2CA8MYV0 355 aa9.37□□□□□ -0.91
PNKP-226ENST00000636840 SPATA31C2B4DYI2 1134 aa9.37□□□□□ -0.91
PNKP-226ENST00000636840 NOP56O00567 594 aaKnown RBP9.37□□□□□ -0.91
PNKP-226ENST00000636840 TLR3O15455 904 aaKnown RBP9.37□□□□□ -0.91
PNKP-226ENST00000636840 PPFIA4O75335 1185 aa9.37□□□□□ -0.91
PNKP-226ENST00000636840 GGPS1O95749 300 aa9.37□□□□□ -0.91
PNKP-226ENST00000636840 MYL3P08590 195 aa9.37□□□□□ -0.91
PNKP-226ENST00000636840 COL6A1P12109 1028 aa9.37□□□□□ -0.91
PNKP-226ENST00000636840 SREBF1P36956 1147 aa9.37□□□□□ -0.91
PNKP-226ENST00000636840 CLK2P49760 499 aaKnown RBP9.37□□□□□ -0.91
PNKP-226ENST00000636840 USP11P51784 963 aa9.37□□□□□ -0.91
PNKP-226ENST00000636840 ATN1P54259 1190 aaPredicted RBP9.37□□□□□ -0.91
PNKP-226ENST00000636840 MRPS9P82933 396 aaKnown RBP9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms