RNA–Protein interactions for RNA: ENST00000636768.1

CACNA1A-230, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 1,034 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-230ENST00000636768 C16orf59Q7L2K0 433 aa17.36■□□□□ 0.37
CACNA1A-230ENST00000636768 CCDC136Q96JN2 1154 aa17.36■□□□□ 0.37
CACNA1A-230ENST00000636768 LZTS2Q9BRK4 669 aa17.36■□□□□ 0.37
CACNA1A-230ENST00000636768 SPZ1Q9BXG8 430 aa17.36■□□□□ 0.37
CACNA1A-230ENST00000636768 IL23AQ9NPF7 189 aa17.36■□□□□ 0.37
CACNA1A-230ENST00000636768 HSFX4A0A1B0GTS1 333 aaPredicted RBP17.35■□□□□ 0.37
CACNA1A-230ENST00000636768 HSFX3A0A1B0GWH4 333 aaPredicted RBP17.35■□□□□ 0.37
CACNA1A-230ENST00000636768 CALM1P0DP23 149 aa17.35■□□□□ 0.37
CACNA1A-230ENST00000636768 CALM2P0DP24 149 aa17.35■□□□□ 0.37
CACNA1A-230ENST00000636768 CALM3P0DP25 149 aa17.35■□□□□ 0.37
CACNA1A-230ENST00000636768 CYP2C9P11712 490 aa17.35■□□□□ 0.37
CACNA1A-230ENST00000636768 RXRAP19793 462 aa17.35■□□□□ 0.37
CACNA1A-230ENST00000636768 CCND2P30279 289 aa17.35■□□□□ 0.37
CACNA1A-230ENST00000636768 NFRKBQ6P4R8 1299 aa17.35■□□□□ 0.37
CACNA1A-230ENST00000636768 ZNF365Q70YC5 407 aa17.35■□□□□ 0.37
CACNA1A-230ENST00000636768 PPP1R13LQ8WUF5 828 aa17.35■□□□□ 0.37
CACNA1A-230ENST00000636768 GUCD1Q96NT3 240 aa17.35■□□□□ 0.37
CACNA1A-230ENST00000636768 LRRC2Q9BYS8 371 aa17.35■□□□□ 0.37
CACNA1A-230ENST00000636768 DDX41Q9UJV9 622 aaKnown RBP17.35■□□□□ 0.37
CACNA1A-230ENST00000636768 NOD1Q9Y239 953 aa17.35■□□□□ 0.37
CACNA1A-230ENST00000636768 SLC12A7Q9Y666 1083 aa17.35■□□□□ 0.37
CACNA1A-230ENST00000636768 PLEKHA8P1O95397 391 aa17.34■□□□□ 0.37
CACNA1A-230ENST00000636768 CASTP20810 708 aaKnown RBP17.34■□□□□ 0.37
CACNA1A-230ENST00000636768 LIFRP42702 1097 aa17.34■□□□□ 0.37
CACNA1A-230ENST00000636768 COL9A3Q14050 684 aaPredicted RBP17.34■□□□□ 0.37
CACNA1A-230ENST00000636768 DGKDQ16760 1214 aa17.34■□□□□ 0.37
CACNA1A-230ENST00000636768 RAB11FIP4Q86YS3 637 aa17.34■□□□□ 0.37
CACNA1A-230ENST00000636768 DHX37Q8IY37 1157 aaKnown RBP17.34■□□□□ 0.37
CACNA1A-230ENST00000636768 IL31RAQ8NI17 732 aa17.34■□□□□ 0.37
CACNA1A-230ENST00000636768 WNT8AQ9H1J5 351 aa17.34■□□□□ 0.37
CACNA1A-230ENST00000636768 MTIF3Q9H2K0 278 aaKnown RBP17.34■□□□□ 0.37
CACNA1A-230ENST00000636768 FGBP02675 491 aa17.33■□□□□ 0.36
CACNA1A-230ENST00000636768 SMARCA1P28370 1054 aa17.33■□□□□ 0.36
CACNA1A-230ENST00000636768 PTPN11Q06124 597 aaPredicted RBP17.33■□□□□ 0.36
CACNA1A-230ENST00000636768 LAMC2Q13753 1193 aa17.33■□□□□ 0.36
CACNA1A-230ENST00000636768 KCNV1Q6PIU1 500 aa17.33■□□□□ 0.36
CACNA1A-230ENST00000636768 VSIG10LQ86VR7 867 aa17.33■□□□□ 0.36
CACNA1A-230ENST00000636768 SLC17A8Q8NDX2 589 aa17.33■□□□□ 0.36
CACNA1A-230ENST00000636768 CUL5Q93034 780 aa17.33■□□□□ 0.36
CACNA1A-230ENST00000636768 EMID1Q96A84 441 aaPredicted RBP17.33■□□□□ 0.36
CACNA1A-230ENST00000636768 SCLYQ96I15 445 aa17.33■□□□□ 0.36
CACNA1A-230ENST00000636768 SEMA6BQ9H3T3 888 aa17.33■□□□□ 0.36
CACNA1A-230ENST00000636768 RGS20O76081 388 aa17.32■□□□□ 0.36
CACNA1A-230ENST00000636768 DNAJB2P25686 324 aa17.32■□□□□ 0.36
CACNA1A-230ENST00000636768 SYNE3Q6ZMZ3 975 aa17.32■□□□□ 0.36
CACNA1A-230ENST00000636768 MICU3Q86XE3 530 aa17.32■□□□□ 0.36
CACNA1A-230ENST00000636768 RPUSD2Q8IZ73 545 aaKnown RBP17.32■□□□□ 0.36
CACNA1A-230ENST00000636768 CMTR1Q8N1G2 835 aaKnown RBP17.32■□□□□ 0.36
CACNA1A-230ENST00000636768 SRBD1Q8N5C6 995 aaKnown RBP17.32■□□□□ 0.36
CACNA1A-230ENST00000636768 PPTC7Q8NI37 304 aa17.32■□□□□ 0.36
CACNA1A-230ENST00000636768 SMARCC2Q8TAQ2 1214 aa17.32■□□□□ 0.36
CACNA1A-230ENST00000636768 HERVK_113Q902F9 699 aa17.32■□□□□ 0.36
CACNA1A-230ENST00000636768 ZFP91Q96JP5 570 aaPredicted RBP17.32■□□□□ 0.36
CACNA1A-230ENST00000636768 NEK1Q96PY6 1258 aa17.32■□□□□ 0.36
CACNA1A-230ENST00000636768 LAMA2P24043 3122 aaKnown RBP17.32■□□□□ 0.36
CACNA1A-230ENST00000636768 TMEM265A0A087WTH1 108 aa17.31■□□□□ 0.36
CACNA1A-230ENST00000636768 SORBS3O60504 671 aa17.31■□□□□ 0.36
CACNA1A-230ENST00000636768 GGPS1O95749 300 aa17.31■□□□□ 0.36
CACNA1A-230ENST00000636768 GNPTABQ3T906 1256 aa17.31■□□□□ 0.36
CACNA1A-230ENST00000636768 RASIP1Q5U651 963 aa17.31■□□□□ 0.36
CACNA1A-230ENST00000636768 OTOP2Q7RTS6 562 aa17.31■□□□□ 0.36
CACNA1A-230ENST00000636768 RETREG2Q8NC44 543 aa17.31■□□□□ 0.36
CACNA1A-230ENST00000636768 SPATA33Q96N06 139 aa17.31■□□□□ 0.36
CACNA1A-230ENST00000636768 CDX2Q99626 313 aaPredicted RBP17.31■□□□□ 0.36
CACNA1A-230ENST00000636768 KATNAL1Q9BW62 490 aa17.31■□□□□ 0.36
CACNA1A-230ENST00000636768 TTYH1Q9H313 450 aaPredicted RBP17.31■□□□□ 0.36
CACNA1A-230ENST00000636768 ZNF286BP0CG31 522 aa17.3■□□□□ 0.36
CACNA1A-230ENST00000636768 TGFB3P10600 412 aa17.3■□□□□ 0.36
CACNA1A-230ENST00000636768 UBA1P22314 1058 aaKnown RBP17.3■□□□□ 0.36
CACNA1A-230ENST00000636768 BFSP2Q13515 415 aa17.3■□□□□ 0.36
CACNA1A-230ENST00000636768 KRT32Q14532 448 aa17.3■□□□□ 0.36
CACNA1A-230ENST00000636768 PTGISQ16647 500 aa17.3■□□□□ 0.36
CACNA1A-230ENST00000636768 CELF3Q5SZQ8 465 aaKnown RBP17.3■□□□□ 0.36
CACNA1A-230ENST00000636768 USP17L6PQ6QN14 398 aa17.3■□□□□ 0.36
CACNA1A-230ENST00000636768 SGMS1Q86VZ5 419 aa17.3■□□□□ 0.36
CACNA1A-230ENST00000636768 CCDC82Q8N4S0 544 aa17.3■□□□□ 0.36
CACNA1A-230ENST00000636768 C7orf31Q8N865 590 aa17.3■□□□□ 0.36
CACNA1A-230ENST00000636768 FANCBQ8NB91 859 aa17.3■□□□□ 0.36
CACNA1A-230ENST00000636768 KAT2BQ92831 832 aa17.3■□□□□ 0.36
CACNA1A-230ENST00000636768 TIFAQ96CG3 184 aa17.3■□□□□ 0.36
CACNA1A-230ENST00000636768 ALG1Q9BT22 464 aa17.3■□□□□ 0.36
CACNA1A-230ENST00000636768 MLXIPQ9HAP2 919 aa17.3■□□□□ 0.36
CACNA1A-230ENST00000636768 MYH6P13533 1939 aa17.29■□□□□ 0.36
CACNA1A-230ENST00000636768 FRMPD4Q14CM0 1322 aa17.29■□□□□ 0.36
CACNA1A-230ENST00000636768 ZBBXA8MT70 800 aa17.29■□□□□ 0.36
CACNA1A-230ENST00000636768 GRXCR1A8MXD5 290 aa17.29■□□□□ 0.36
CACNA1A-230ENST00000636768 PITPNM1O00562 1244 aa17.29■□□□□ 0.36
CACNA1A-230ENST00000636768 STAM2O75886 525 aa17.29■□□□□ 0.36
CACNA1A-230ENST00000636768 PFKMP08237 780 aa17.29■□□□□ 0.36
CACNA1A-230ENST00000636768 PSEN2P49810 448 aa17.29■□□□□ 0.36
CACNA1A-230ENST00000636768 MFSD10Q14728 455 aa17.29■□□□□ 0.36
CACNA1A-230ENST00000636768 MYSM1Q5VVJ2 828 aa17.29■□□□□ 0.36
CACNA1A-230ENST00000636768 TMTC3Q6ZXV5 915 aa17.29■□□□□ 0.36
CACNA1A-230ENST00000636768 DHX32Q7L7V1 743 aaKnown RBP17.29■□□□□ 0.36
CACNA1A-230ENST00000636768 DEFB128Q7Z7B8 93 aa17.29■□□□□ 0.36
CACNA1A-230ENST00000636768 CCDC155Q8N6L0 562 aa17.29■□□□□ 0.36
CACNA1A-230ENST00000636768 GPKOWQ92917 476 aaPredicted RBP eCLIP17.29■□□□□ 0.36
CACNA1A-230ENST00000636768 TCEANC2Q96MN5 208 aa17.29■□□□□ 0.36
CACNA1A-230ENST00000636768 CXXC1Q9P0U4 656 aaPredicted RBP17.29■□□□□ 0.36
CACNA1A-230ENST00000636768 hCG_1642624A0A1W2PR95 340 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms