RNA–Protein interactions for RNA: ENST00000635917.1

CACNA1A-219, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 1,832 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-219ENST00000635917 KRT79Q5XKE5 535 aa14.06□□□□□ -0.16
CACNA1A-219ENST00000635917 KLHL10Q6JEL2 608 aa14.06□□□□□ -0.16
CACNA1A-219ENST00000635917 CYP2W1Q8TAV3 490 aa14.06□□□□□ -0.16
CACNA1A-219ENST00000635917 LARP4BQ92615 738 aaKnown RBP14.06□□□□□ -0.16
CACNA1A-219ENST00000635917 RAD54LQ92698 747 aa14.06□□□□□ -0.16
CACNA1A-219ENST00000635917 KLRG1Q96E93 195 aa14.06□□□□□ -0.16
CACNA1A-219ENST00000635917 FEZ1Q99689 392 aa14.06□□□□□ -0.16
CACNA1A-219ENST00000635917 SLF1Q9BQI6 1058 aa14.06□□□□□ -0.16
CACNA1A-219ENST00000635917 SLC38A10Q9HBR0 1119 aa14.06□□□□□ -0.16
CACNA1A-219ENST00000635917 PPP2R3BQ9Y5P8 575 aa14.06□□□□□ -0.16
CACNA1A-219ENST00000635917 WDR90Q96KV7 1748 aa14.06□□□□□ -0.16
CACNA1A-219ENST00000635917 PITPNM2Q9BZ72 1349 aa14.05□□□□□ -0.16
CACNA1A-219ENST00000635917 A0A1B0GTH6 734 aa14.05□□□□□ -0.16
CACNA1A-219ENST00000635917 MYMKA6NI61 221 aa14.05□□□□□ -0.16
CACNA1A-219ENST00000635917 LRRC10BA6NIK2 292 aa14.05□□□□□ -0.16
CACNA1A-219ENST00000635917 CFBP00751 764 aa14.05□□□□□ -0.16
CACNA1A-219ENST00000635917 SERPINC1P01008 464 aa14.05□□□□□ -0.16
CACNA1A-219ENST00000635917 PTPRAP18433 802 aa14.05□□□□□ -0.16
CACNA1A-219ENST00000635917 VCAM1P19320 739 aa14.05□□□□□ -0.16
CACNA1A-219ENST00000635917 STX17P56962 302 aa14.05□□□□□ -0.16
CACNA1A-219ENST00000635917 CCZ1BP86790 482 aa14.05□□□□□ -0.16
CACNA1A-219ENST00000635917 CCZ1P86791 482 aaPredicted RBP14.05□□□□□ -0.16
CACNA1A-219ENST00000635917 MTMR2Q13614 643 aa14.05□□□□□ -0.16
CACNA1A-219ENST00000635917 MCM6Q14566 821 aa14.05□□□□□ -0.16
CACNA1A-219ENST00000635917 PRR16Q569H4 304 aa14.05□□□□□ -0.16
CACNA1A-219ENST00000635917 HSP90AA4PQ58FG1 418 aa14.05□□□□□ -0.16
CACNA1A-219ENST00000635917 FILIP1Q7Z7B0 1213 aa14.05□□□□□ -0.16
CACNA1A-219ENST00000635917 VSTM4Q8IW00 320 aa14.05□□□□□ -0.16
CACNA1A-219ENST00000635917 CLEC4DQ8WXI8 215 aa14.05□□□□□ -0.16
CACNA1A-219ENST00000635917 ZKSCAN4Q969J2 545 aaPredicted RBP14.05□□□□□ -0.16
CACNA1A-219ENST00000635917 AGBL1Q96MI9 1066 aa14.05□□□□□ -0.16
CACNA1A-219ENST00000635917 FAM20AQ96MK3 541 aa14.05□□□□□ -0.16
CACNA1A-219ENST00000635917 SYT17Q9BSW7 474 aa14.05□□□□□ -0.16
CACNA1A-219ENST00000635917 FZD1Q9UP38 647 aa14.05□□□□□ -0.16
CACNA1A-219ENST00000635917 CTNND2Q9UQB3 1225 aa14.05□□□□□ -0.16
CACNA1A-219ENST00000635917 OTOFQ9HC10 1997 aa14.04□□□□□ -0.16
CACNA1A-219ENST00000635917 GCOM1H8Y6P7 765 aaPredicted RBP14.04□□□□□ -0.16
CACNA1A-219ENST00000635917 MSH4O15457 936 aa14.04□□□□□ -0.16
CACNA1A-219ENST00000635917 CBFA2T2O43439 604 aa14.04□□□□□ -0.16
CACNA1A-219ENST00000635917 OFD1O75665 1012 aa14.04□□□□□ -0.16
CACNA1A-219ENST00000635917 POLR2MP0CAP2 368 aa14.04□□□□□ -0.16
CACNA1A-219ENST00000635917 BACE1P56817 501 aa14.04□□□□□ -0.16
CACNA1A-219ENST00000635917 GSDMDP57764 484 aa14.04□□□□□ -0.16
CACNA1A-219ENST00000635917 AMPD3Q01432 767 aa14.04□□□□□ -0.16
CACNA1A-219ENST00000635917 PAK1Q13153 545 aa14.04□□□□□ -0.16
CACNA1A-219ENST00000635917 NOLC1Q14978 699 aaKnown RBP eCLIP14.04□□□□□ -0.16
CACNA1A-219ENST00000635917 NR1I3Q14994 352 aa14.04□□□□□ -0.16
CACNA1A-219ENST00000635917 ARMCX5Q6P1M9 558 aa14.04□□□□□ -0.16
CACNA1A-219ENST00000635917 SV2BQ7L1I2 683 aa14.04□□□□□ -0.16
CACNA1A-219ENST00000635917 C17orf53Q8N3J3 647 aaPredicted RBP14.04□□□□□ -0.16
CACNA1A-219ENST00000635917 HOOK2Q96ED9 719 aa14.04□□□□□ -0.16
CACNA1A-219ENST00000635917 C12orf42Q96LP6 360 aa14.04□□□□□ -0.16
CACNA1A-219ENST00000635917 WRNIP1Q96S55 665 aa14.04□□□□□ -0.16
CACNA1A-219ENST00000635917 VAV3Q9UKW4 847 aa14.04□□□□□ -0.16
CACNA1A-219ENST00000635917 DDNO94850 711 aaPredicted RBP14.04□□□□□ -0.16
CACNA1A-219ENST00000635917 YBX3P16989 372 aaKnown RBP eCLIP14.04□□□□□ -0.16
CACNA1A-219ENST00000635917 PMS1P54277 932 aaKnown RBP14.04□□□□□ -0.16
CACNA1A-219ENST00000635917 USP14P54578 494 aa14.04□□□□□ -0.16
CACNA1A-219ENST00000635917 STK4Q13043 487 aa14.04□□□□□ -0.16
CACNA1A-219ENST00000635917 SPP2Q13103 211 aa14.04□□□□□ -0.16
CACNA1A-219ENST00000635917 TBX2Q13207 712 aaPredicted RBP14.04□□□□□ -0.16
CACNA1A-219ENST00000635917 NOL9Q5SY16 702 aaKnown RBP14.04□□□□□ -0.16
CACNA1A-219ENST00000635917 TMC6Q7Z403 805 aa14.04□□□□□ -0.16
CACNA1A-219ENST00000635917 FCHSD1Q86WN1 690 aa14.04□□□□□ -0.16
CACNA1A-219ENST00000635917 IRF2BP1Q8IU81 584 aa14.04□□□□□ -0.16
CACNA1A-219ENST00000635917 NELFBQ8WX92 580 aa14.04□□□□□ -0.16
CACNA1A-219ENST00000635917 DNAJC19Q96DA6 116 aa14.04□□□□□ -0.16
CACNA1A-219ENST00000635917 ADD3Q9UEY8 706 aaKnown RBP14.04□□□□□ -0.16
CACNA1A-219ENST00000635917 PPP1R9AQ9ULJ8 1098 aa14.04□□□□□ -0.16
CACNA1A-219ENST00000635917 RPTORQ8N122 1335 aa14.03□□□□□ -0.16
CACNA1A-219ENST00000635917 KDM3AQ9Y4C1 1321 aa14.03□□□□□ -0.16
CACNA1A-219ENST00000635917 PVALEFA0A1B0GWK0 134 aa14.03□□□□□ -0.16
CACNA1A-219ENST00000635917 SPATA31C1P0DKV0 1188 aa14.03□□□□□ -0.16
CACNA1A-219ENST00000635917 PBX1P40424 430 aa14.03□□□□□ -0.16
CACNA1A-219ENST00000635917 KIAA0895Q8NCT3 520 aa14.03□□□□□ -0.16
CACNA1A-219ENST00000635917 ZNF280CQ8ND82 737 aa14.03□□□□□ -0.16
CACNA1A-219ENST00000635917 NT5C3AQ9H0P0 336 aa14.03□□□□□ -0.16
CACNA1A-219ENST00000635917 COL20A1Q9P218 1284 aa14.03□□□□□ -0.16
CACNA1A-219ENST00000635917 NFIBO00712 420 aa14.02□□□□□ -0.16
CACNA1A-219ENST00000635917 MED24O75448 989 aa14.02□□□□□ -0.16
CACNA1A-219ENST00000635917 FCER1AP12319 257 aa14.02□□□□□ -0.16
CACNA1A-219ENST00000635917 STAT3P40763 770 aa14.02□□□□□ -0.16
CACNA1A-219ENST00000635917 ASIC1P78348 528 aa14.02□□□□□ -0.16
CACNA1A-219ENST00000635917 TTI2Q6NXR4 508 aa14.02□□□□□ -0.16
CACNA1A-219ENST00000635917 UNC13DQ70J99 1090 aa14.02□□□□□ -0.16
CACNA1A-219ENST00000635917 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.02□□□□□ -0.16
CACNA1A-219ENST00000635917 SPOCK2Q92563 424 aa14.02□□□□□ -0.16
CACNA1A-219ENST00000635917 CDK5RAP3Q96JB5 506 aa14.02□□□□□ -0.16
CACNA1A-219ENST00000635917 UIMC1Q96RL1 719 aa14.02□□□□□ -0.16
CACNA1A-219ENST00000635917 CCPG1Q9ULG6 757 aa14.02□□□□□ -0.16
CACNA1A-219ENST00000635917 ADAMTS5Q9UNA0 930 aa14.02□□□□□ -0.16
CACNA1A-219ENST00000635917 MAPK8IP1Q9UQF2 711 aa14.02□□□□□ -0.16
CACNA1A-219ENST00000635917 FRMPD4Q14CM0 1322 aa14.02□□□□□ -0.17
CACNA1A-219ENST00000635917 LOC285556D6RIA3 1793 aa14.02□□□□□ -0.17
CACNA1A-219ENST00000635917 POTEB3A0JP26 581 aa14.01□□□□□ -0.17
CACNA1A-219ENST00000635917 POTECB2RU33 542 aa14.01□□□□□ -0.17
CACNA1A-219ENST00000635917 COBLO75128 1261 aa14.01□□□□□ -0.17
CACNA1A-219ENST00000635917 PSMD10O75832 226 aa14.01□□□□□ -0.17
CACNA1A-219ENST00000635917 ECM2O94769 699 aaPredicted RBP14.01□□□□□ -0.17
CACNA1A-219ENST00000635917 RPA1P27694 616 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms