RNA–Protein interactions for RNA: ENST00000635828.1

CDKL5-209, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 5 BASIC

Gene CDKL5, Length 3,823 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-209ENST00000635828 GHRHRQ02643 423 aa9.74□□□□□ -0.85
CDKL5-209ENST00000635828 CEBPZQ03701 1054 aaKnown RBP9.74□□□□□ -0.85
CDKL5-209ENST00000635828 LETM2Q2VYF4 491 aa9.74□□□□□ -0.85
CDKL5-209ENST00000635828 SLC9C1Q4G0N8 1177 aa9.74□□□□□ -0.85
CDKL5-209ENST00000635828 SOCS4Q8WXH5 440 aa9.74□□□□□ -0.85
CDKL5-209ENST00000635828 INTS4Q96HW7 963 aaKnown RBP9.74□□□□□ -0.85
CDKL5-209ENST00000635828 EDNRBP24530 442 aa9.74□□□□□ -0.85
CDKL5-209ENST00000635828 KRT2P35908 639 aa9.74□□□□□ -0.85
CDKL5-209ENST00000635828 MRPL12P52815 198 aaKnown RBP9.74□□□□□ -0.85
CDKL5-209ENST00000635828 ARHGAP4P98171 946 aa9.74□□□□□ -0.85
CDKL5-209ENST00000635828 SP4Q02446 784 aa9.74□□□□□ -0.85
CDKL5-209ENST00000635828 CCDC144BQ3MJ40 725 aa9.74□□□□□ -0.85
CDKL5-209ENST00000635828 SH3GLB2Q9NR46 395 aa9.74□□□□□ -0.85
CDKL5-209ENST00000635828 XIRP2A4UGR9 3374 aa9.74□□□□□ -0.85
CDKL5-209ENST00000635828 ESYT2A0FGR8 921 aa9.74□□□□□ -0.85
CDKL5-209ENST00000635828 H3BQV1 296 aa9.74□□□□□ -0.85
CDKL5-209ENST00000635828 IFFO2Q5TF58 517 aa9.74□□□□□ -0.85
CDKL5-209ENST00000635828 VSIG10LQ86VR7 867 aa9.74□□□□□ -0.85
CDKL5-209ENST00000635828 RGS22Q8NE09 1264 aa9.74□□□□□ -0.85
CDKL5-209ENST00000635828 LENG9Q96B70 501 aa9.74□□□□□ -0.85
CDKL5-209ENST00000635828 PCDHB6Q9Y5E3 794 aa9.74□□□□□ -0.85
CDKL5-209ENST00000635828 STX6O43752 255 aa9.73□□□□□ -0.85
CDKL5-209ENST00000635828 DDIT3P35638 169 aa9.73□□□□□ -0.85
CDKL5-209ENST00000635828 TPRNQ4KMQ1 711 aa9.73□□□□□ -0.85
CDKL5-209ENST00000635828 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.73□□□□□ -0.85
CDKL5-209ENST00000635828 NSUN6Q8TEA1 469 aaKnown RBP9.73□□□□□ -0.85
CDKL5-209ENST00000635828 DDX39AO00148 427 aaKnown RBP9.73□□□□□ -0.85
CDKL5-209ENST00000635828 PGK1P00558 417 aa9.73□□□□□ -0.85
CDKL5-209ENST00000635828 SMPD1P17405 629 aa9.73□□□□□ -0.85
CDKL5-209ENST00000635828 GNA11P29992 359 aa9.73□□□□□ -0.85
CDKL5-209ENST00000635828 ANP32AP39687 249 aaKnown RBP9.73□□□□□ -0.85
CDKL5-209ENST00000635828 ACVR2BQ13705 512 aa9.73□□□□□ -0.85
CDKL5-209ENST00000635828 CCDC148Q8NFR7 591 aa9.73□□□□□ -0.85
CDKL5-209ENST00000635828 IGLV3-22A0A075B6J6 115 aa9.73□□□□□ -0.85
CDKL5-209ENST00000635828 XRCC5P13010 732 aaKnown RBP9.73□□□□□ -0.85
CDKL5-209ENST00000635828 CYBAP13498 195 aa9.73□□□□□ -0.85
CDKL5-209ENST00000635828 TRIM29Q14134 588 aa9.73□□□□□ -0.85
CDKL5-209ENST00000635828 ZNF174Q15697 407 aa9.73□□□□□ -0.85
CDKL5-209ENST00000635828 PRR16Q569H4 304 aa9.73□□□□□ -0.85
CDKL5-209ENST00000635828 PPP1R18Q6NYC8 613 aa9.73□□□□□ -0.85
CDKL5-209ENST00000635828 POTEDQ86YR6 584 aa9.73□□□□□ -0.85
CDKL5-209ENST00000635828 TMEM60Q9H2L4 133 aa9.73□□□□□ -0.85
CDKL5-209ENST00000635828 CCNT1O60563 726 aaKnown RBP9.72□□□□□ -0.85
CDKL5-209ENST00000635828 SREBF1P36956 1147 aa9.72□□□□□ -0.85
CDKL5-209ENST00000635828 BEX3Q00994 111 aa9.72□□□□□ -0.85
CDKL5-209ENST00000635828 PDE4DQ08499 809 aa9.72□□□□□ -0.85
CDKL5-209ENST00000635828 IRF5Q13568 498 aa9.72□□□□□ -0.85
CDKL5-209ENST00000635828 TRMT1LQ7Z2T5 733 aaKnown RBP9.72□□□□□ -0.85
CDKL5-209ENST00000635828 DAGLBQ8NCG7 672 aa9.72□□□□□ -0.85
CDKL5-209ENST00000635828 RBM27Q9P2N5 1060 aaKnown RBP9.72□□□□□ -0.85
CDKL5-209ENST00000635828 FRMPD4Q14CM0 1322 aa9.72□□□□□ -0.85
CDKL5-209ENST00000635828 U2AF2P26368 475 aaKnown RBP eCLIP9.72□□□□□ -0.85
CDKL5-209ENST00000635828 MCM7P33993 719 aa9.72□□□□□ -0.85
CDKL5-209ENST00000635828 NOSTRINQ8IVI9 506 aa9.72□□□□□ -0.85
CDKL5-209ENST00000635828 WASF1Q92558 559 aa9.72□□□□□ -0.85
CDKL5-209ENST00000635828 PRDM10Q9NQV6 1147 aa9.72□□□□□ -0.85
CDKL5-209ENST00000635828 hCG_1984214I3L0E3 225 aa9.72□□□□□ -0.85
CDKL5-209ENST00000635828 GRIN1Q05586 938 aa9.72□□□□□ -0.85
CDKL5-209ENST00000635828 RESTQ13127 1097 aa9.72□□□□□ -0.85
CDKL5-209ENST00000635828 ITGB3BPQ13352 177 aaPredicted RBP9.72□□□□□ -0.85
CDKL5-209ENST00000635828 MAP3K21Q5TCX8 1036 aa9.72□□□□□ -0.85
CDKL5-209ENST00000635828 ZNF713Q8N859 430 aaPredicted RBP9.72□□□□□ -0.85
CDKL5-209ENST00000635828 DNERQ8NFT8 737 aa9.72□□□□□ -0.85
CDKL5-209ENST00000635828 TFIP11Q9UBB9 837 aaKnown RBP9.72□□□□□ -0.85
CDKL5-209ENST00000635828 A0A087WWV3 80 aa9.71□□□□□ -0.85
CDKL5-209ENST00000635828 HOXD10P28358 340 aa9.71□□□□□ -0.85
CDKL5-209ENST00000635828 HSDL1Q3SXM5 330 aa9.71□□□□□ -0.85
CDKL5-209ENST00000635828 FBXO46Q6PJ61 603 aaPredicted RBP9.71□□□□□ -0.85
CDKL5-209ENST00000635828 CCDC12Q8WUD4 166 aaPredicted RBP9.71□□□□□ -0.85
CDKL5-209ENST00000635828 DEFB118Q96PH6 123 aa9.71□□□□□ -0.85
CDKL5-209ENST00000635828 KCNH7Q9NS40 1196 aa9.71□□□□□ -0.85
CDKL5-209ENST00000635828 CLIC4Q9Y696 253 aa9.71□□□□□ -0.85
CDKL5-209ENST00000635828 FRMPD3Q5JV73 1810 aa9.71□□□□□ -0.85
CDKL5-209ENST00000635828 CCDC194A0A1B0GVG4 234 aa9.71□□□□□ -0.86
CDKL5-209ENST00000635828 HMGCRP04035 888 aa9.71□□□□□ -0.86
CDKL5-209ENST00000635828 COPB2P35606 906 aa9.71□□□□□ -0.86
CDKL5-209ENST00000635828 PCNX4Q63HM2 1172 aa9.71□□□□□ -0.86
CDKL5-209ENST00000635828 LHX8Q68G74 356 aa9.71□□□□□ -0.86
CDKL5-209ENST00000635828 ZNF333Q96JL9 665 aa9.71□□□□□ -0.86
CDKL5-209ENST00000635828 RNF208Q9H0X6 261 aa9.71□□□□□ -0.86
CDKL5-209ENST00000635828 GDPD2Q9HCC8 539 aa9.71□□□□□ -0.86
CDKL5-209ENST00000635828 REV3LO60673 3130 aa9.71□□□□□ -0.86
CDKL5-209ENST00000635828 CCL5P13501 91 aa9.71□□□□□ -0.86
CDKL5-209ENST00000635828 XBP1P17861 261 aa9.71□□□□□ -0.86
CDKL5-209ENST00000635828 CDC25AP30304 524 aa9.71□□□□□ -0.86
CDKL5-209ENST00000635828 BECN1Q14457 450 aa9.71□□□□□ -0.86
CDKL5-209ENST00000635828 NONOQ15233 471 aaKnown RBP eCLIP9.71□□□□□ -0.86
CDKL5-209ENST00000635828 STXBP2Q15833 593 aa9.71□□□□□ -0.86
CDKL5-209ENST00000635828 IL17AQ16552 155 aa9.71□□□□□ -0.86
CDKL5-209ENST00000635828 CYFIP1Q7L576 1253 aa9.71□□□□□ -0.86
CDKL5-209ENST00000635828 MORC4Q8TE76 937 aa9.71□□□□□ -0.86
CDKL5-209ENST00000635828 ADD3Q9UEY8 706 aaKnown RBP9.71□□□□□ -0.86
CDKL5-209ENST00000635828 MYH15Q9Y2K3 1946 aa9.71□□□□□ -0.86
CDKL5-209ENST00000635828 UBA1P22314 1058 aaKnown RBP9.7□□□□□ -0.86
CDKL5-209ENST00000635828 GNL2Q13823 731 aaKnown RBP9.7□□□□□ -0.86
CDKL5-209ENST00000635828 CCDC62Q6P9F0 684 aa9.7□□□□□ -0.86
CDKL5-209ENST00000635828 PXYLP1Q8TE99 480 aa9.7□□□□□ -0.86
CDKL5-209ENST00000635828 HAS1Q92839 578 aa9.7□□□□□ -0.86
CDKL5-209ENST00000635828 CTAGE5O15320 804 aa9.7□□□□□ -0.86
CDKL5-209ENST00000635828 MSH4O15457 936 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms