RNA–Protein interactions for RNA: ENST00000635675.2

LINC00339-210, long intergenic non-protein coding RNA 339, humanhuman

TSL 5 BASIC

Gene LINC00339, Length 1,404 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-210ENST00000635675 GJA9P57773 515 aa11.17□□□□□ -0.62
LINC00339-210ENST00000635675 MRPS9P82933 396 aaKnown RBP11.17□□□□□ -0.62
LINC00339-210ENST00000635675 MLLT1Q03111 559 aaPredicted RBP11.17□□□□□ -0.62
LINC00339-210ENST00000635675 GJC2Q5T442 439 aaPredicted RBP11.17□□□□□ -0.62
LINC00339-210ENST00000635675 CCSAPQ6IQ19 270 aaPredicted RBP11.17□□□□□ -0.62
LINC00339-210ENST00000635675 XRRA1Q6P2D8 792 aa11.17□□□□□ -0.62
LINC00339-210ENST00000635675 CCDC62Q6P9F0 684 aa11.17□□□□□ -0.62
LINC00339-210ENST00000635675 SEPT14Q6ZU15 432 aa11.17□□□□□ -0.62
LINC00339-210ENST00000635675 NECAB2Q7Z6G3 386 aa11.17□□□□□ -0.62
LINC00339-210ENST00000635675 KLHDC9Q8NEP7 349 aa11.17□□□□□ -0.62
LINC00339-210ENST00000635675 ZSCAN31Q96LW9 406 aaPredicted RBP11.17□□□□□ -0.62
LINC00339-210ENST00000635675 VPS54Q9P1Q0 977 aa11.17□□□□□ -0.62
LINC00339-210ENST00000635675 PCDHA6Q9UN73 950 aa11.17□□□□□ -0.62
LINC00339-210ENST00000635675 Q9Y3F1 56 aa11.17□□□□□ -0.62
LINC00339-210ENST00000635675 PCDHA8Q9Y5H6 950 aa11.17□□□□□ -0.62
LINC00339-210ENST00000635675 SPDYE3A6NKU9 549 aa11.16□□□□□ -0.62
LINC00339-210ENST00000635675 ST18O60284 1047 aa11.16□□□□□ -0.62
LINC00339-210ENST00000635675 STAM2O75886 525 aa11.16□□□□□ -0.62
LINC00339-210ENST00000635675 ARIH2O95376 493 aa11.16□□□□□ -0.62
LINC00339-210ENST00000635675 FOSP01100 380 aaPredicted RBP11.16□□□□□ -0.62
LINC00339-210ENST00000635675 TXNP10599 105 aaKnown RBP11.16□□□□□ -0.62
LINC00339-210ENST00000635675 FDPSP14324 419 aaKnown RBP11.16□□□□□ -0.62
LINC00339-210ENST00000635675 CST5P28325 142 aaPredicted RBP11.16□□□□□ -0.62
LINC00339-210ENST00000635675 GNA11P29992 359 aa11.16□□□□□ -0.62
LINC00339-210ENST00000635675 IRX5P78411 483 aaPredicted RBP11.16□□□□□ -0.62
LINC00339-210ENST00000635675 TTLL4Q14679 1199 aa11.16□□□□□ -0.62
LINC00339-210ENST00000635675 PCNX4Q63HM2 1172 aa11.16□□□□□ -0.62
LINC00339-210ENST00000635675 RNF180Q86T96 592 aa11.16□□□□□ -0.62
LINC00339-210ENST00000635675 FAM177A1Q8N128 213 aaPredicted RBP11.16□□□□□ -0.62
LINC00339-210ENST00000635675 NSUN7Q8NE18 718 aaKnown RBP11.16□□□□□ -0.62
LINC00339-210ENST00000635675 CCDC148Q8NFR7 591 aa11.16□□□□□ -0.62
LINC00339-210ENST00000635675 ZFP91Q96JP5 570 aaPredicted RBP11.16□□□□□ -0.62
LINC00339-210ENST00000635675 AIFM3Q96NN9 605 aa11.16□□□□□ -0.62
LINC00339-210ENST00000635675 C6orf50Q9HD87 102 aa11.16□□□□□ -0.62
LINC00339-210ENST00000635675 TMEM260Q9NX78 707 aa11.16□□□□□ -0.62
LINC00339-210ENST00000635675 MYADML2A6NDP7 307 aa11.15□□□□□ -0.62
LINC00339-210ENST00000635675 KBTBD13C9JR72 458 aa11.15□□□□□ -0.62
LINC00339-210ENST00000635675 NKRFO15226 690 aaKnown RBP eCLIP11.15□□□□□ -0.62
LINC00339-210ENST00000635675 DYNC1LI2O43237 492 aaPredicted RBP11.15□□□□□ -0.62
LINC00339-210ENST00000635675 CD2BP2O95400 341 aaKnown RBP11.15□□□□□ -0.62
LINC00339-210ENST00000635675 MYCNP04198 464 aaPredicted RBP11.15□□□□□ -0.62
LINC00339-210ENST00000635675 C6orf222P0C671 652 aaPredicted RBP11.15□□□□□ -0.62
LINC00339-210ENST00000635675 AP3B2Q13367 1082 aa11.15□□□□□ -0.62
LINC00339-210ENST00000635675 GNASQ5JWF2 1037 aa11.15□□□□□ -0.62
LINC00339-210ENST00000635675 TLK2Q86UE8 772 aa11.15□□□□□ -0.62
LINC00339-210ENST00000635675 INPP4AQ96PE3 977 aaPredicted RBP11.15□□□□□ -0.62
LINC00339-210ENST00000635675 TSEN34Q9BSV6 310 aaKnown RBP11.15□□□□□ -0.62
LINC00339-210ENST00000635675 AP5M1Q9H0R1 490 aa11.15□□□□□ -0.62
LINC00339-210ENST00000635675 C11orf49Q9H6J7 331 aa11.15□□□□□ -0.62
LINC00339-210ENST00000635675 SPC25Q9HBM1 224 aa11.15□□□□□ -0.62
LINC00339-210ENST00000635675 SH2B1Q9NRF2 756 aaPredicted RBP11.15□□□□□ -0.62
LINC00339-210ENST00000635675 ORC3Q9UBD5 711 aaPredicted RBP11.15□□□□□ -0.62
LINC00339-210ENST00000635675 DDX41Q9UJV9 622 aaKnown RBP11.15□□□□□ -0.62
LINC00339-210ENST00000635675 PHF24Q9UPV7 400 aa11.15□□□□□ -0.62
LINC00339-210ENST00000635675 MKI67P46013 3256 aaKnown RBP11.14□□□□□ -0.63
LINC00339-210ENST00000635675 SPATA31C2B4DYI2 1134 aa11.14□□□□□ -0.63
LINC00339-210ENST00000635675 JAK2O60674 1132 aa11.14□□□□□ -0.63
LINC00339-210ENST00000635675 TGFB3P10600 412 aa11.14□□□□□ -0.63
LINC00339-210ENST00000635675 ICAM3P32942 547 aa11.14□□□□□ -0.63
LINC00339-210ENST00000635675 SREBF1P36956 1147 aa11.14□□□□□ -0.63
LINC00339-210ENST00000635675 NLRP5P59047 1200 aa11.14□□□□□ -0.63
LINC00339-210ENST00000635675 NPY5RQ15761 445 aa11.14□□□□□ -0.63
LINC00339-210ENST00000635675 KCNA10Q16322 511 aa11.14□□□□□ -0.63
LINC00339-210ENST00000635675 LY6KQ17RY6 165 aa11.14□□□□□ -0.63
LINC00339-210ENST00000635675 JAKMIP3Q5VZ66 844 aa11.14□□□□□ -0.63
LINC00339-210ENST00000635675 MCTP2Q6DN12 878 aa11.14□□□□□ -0.63
LINC00339-210ENST00000635675 KCNV1Q6PIU1 500 aa11.14□□□□□ -0.63
LINC00339-210ENST00000635675 CCDC83Q8IWF9 413 aa11.14□□□□□ -0.63
LINC00339-210ENST00000635675 REXO1Q8N1G1 1221 aaKnown RBP11.14□□□□□ -0.63
LINC00339-210ENST00000635675 BICD2Q8TD16 824 aa11.14□□□□□ -0.63
LINC00339-210ENST00000635675 CRYGNQ8WXF5 182 aa11.14□□□□□ -0.63
LINC00339-210ENST00000635675 COPS5Q92905 334 aa11.14□□□□□ -0.63
LINC00339-210ENST00000635675 PGBD1Q96JS3 809 aa11.14□□□□□ -0.63
LINC00339-210ENST00000635675 LLPHQ9BRT6 129 aaKnown RBP11.14□□□□□ -0.63
LINC00339-210ENST00000635675 ANO3Q9BYT9 981 aa11.14□□□□□ -0.63
LINC00339-210ENST00000635675 SENP6Q9GZR1 1112 aaPredicted RBP11.14□□□□□ -0.63
LINC00339-210ENST00000635675 RTEL1Q9NZ71 1219 aa11.14□□□□□ -0.63
LINC00339-210ENST00000635675 MRVI1Q9Y6F6 885 aa11.14□□□□□ -0.63
LINC00339-210ENST00000635675 M0R2N6 131 aa11.13□□□□□ -0.63
LINC00339-210ENST00000635675 ITGB5P18084 799 aa11.13□□□□□ -0.63
LINC00339-210ENST00000635675 MCM2P49736 904 aa11.13□□□□□ -0.63
LINC00339-210ENST00000635675 ACLYP53396 1101 aa11.13□□□□□ -0.63
LINC00339-210ENST00000635675 BEX3Q00994 111 aa11.13□□□□□ -0.63
LINC00339-210ENST00000635675 SP2Q02086 613 aa11.13□□□□□ -0.63
LINC00339-210ENST00000635675 ARHGAP1Q07960 439 aa11.13□□□□□ -0.63
LINC00339-210ENST00000635675 FSCN1Q16658 493 aaKnown RBP11.13□□□□□ -0.63
LINC00339-210ENST00000635675 GALNT17Q6IS24 598 aa11.13□□□□□ -0.63
LINC00339-210ENST00000635675 PCSK9Q8NBP7 692 aaKnown RBP11.13□□□□□ -0.63
LINC00339-210ENST00000635675 DAGLBQ8NCG7 672 aa11.13□□□□□ -0.63
LINC00339-210ENST00000635675 WASF1Q92558 559 aa11.13□□□□□ -0.63
LINC00339-210ENST00000635675 ALG1Q9BT22 464 aa11.13□□□□□ -0.63
LINC00339-210ENST00000635675 PHF20Q9BVI0 1012 aa11.13□□□□□ -0.63
LINC00339-210ENST00000635675 EHMT1Q9H9B1 1298 aa11.13□□□□□ -0.63
LINC00339-210ENST00000635675 GJB4Q9NTQ9 266 aa11.13□□□□□ -0.63
LINC00339-210ENST00000635675 PCDHA4Q9UN74 947 aa11.13□□□□□ -0.63
LINC00339-210ENST00000635675 UBIAD1Q9Y5Z9 338 aa11.13□□□□□ -0.63
LINC00339-210ENST00000635675 TNRC18O15417 2968 aaPredicted RBP11.13□□□□□ -0.63
LINC00339-210ENST00000635675 PDE4DIPQ5VU43 2346 aa11.12□□□□□ -0.63
LINC00339-210ENST00000635675 A0A1W2PQ45 241 aaPredicted RBP11.12□□□□□ -0.63
LINC00339-210ENST00000635675 A0A1W2PQY0 241 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms