RNA–Protein interactions for RNA: ENST00000635251.1

PSPC1-207, Transcript of paraspeckle component 1, humanhuman

TSL 2

Gene PSPC1, Length 2,285 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-207ENST00000635251 TRAPPC3LQ5T215 181 aa11.89□□□□□ -0.51
PSPC1-207ENST00000635251 CACNA2D4Q7Z3S7 1137 aa11.89□□□□□ -0.51
PSPC1-207ENST00000635251 CCDC84Q86UT8 332 aaPredicted RBP11.89□□□□□ -0.51
PSPC1-207ENST00000635251 GSPT2Q8IYD1 628 aaKnown RBP11.89□□□□□ -0.51
PSPC1-207ENST00000635251 LRRC47Q8N1G4 583 aaKnown RBP11.89□□□□□ -0.51
PSPC1-207ENST00000635251 FNBP4Q8N3X1 1017 aaPredicted RBP11.89□□□□□ -0.51
PSPC1-207ENST00000635251 GUF1Q8N442 669 aaKnown RBP11.89□□□□□ -0.51
PSPC1-207ENST00000635251 RAD54LQ92698 747 aa11.89□□□□□ -0.51
PSPC1-207ENST00000635251 CRACR2AQ9BSW2 395 aa11.89□□□□□ -0.51
PSPC1-207ENST00000635251 LRRC27Q9C0I9 530 aa11.89□□□□□ -0.51
PSPC1-207ENST00000635251 SH2D4AQ9H788 454 aa11.89□□□□□ -0.51
PSPC1-207ENST00000635251 FAM204AQ9H8W3 233 aa11.89□□□□□ -0.51
PSPC1-207ENST00000635251 MLXIPQ9HAP2 919 aa11.89□□□□□ -0.51
PSPC1-207ENST00000635251 GPCPD1Q9NPB8 672 aa11.89□□□□□ -0.51
PSPC1-207ENST00000635251 GGA1Q9UJY5 639 aa11.89□□□□□ -0.51
PSPC1-207ENST00000635251 HPCAL4Q9UM19 191 aa11.89□□□□□ -0.51
PSPC1-207ENST00000635251 ATP2B4P23634 1241 aa11.88□□□□□ -0.51
PSPC1-207ENST00000635251 LRRC63Q05C16 580 aa11.88□□□□□ -0.51
PSPC1-207ENST00000635251 LRRC41Q15345 812 aa11.88□□□□□ -0.51
PSPC1-207ENST00000635251 C15orf52Q6ZUT6 534 aaKnown RBP11.88□□□□□ -0.51
PSPC1-207ENST00000635251 DDX12PQ92771 950 aa11.88□□□□□ -0.51
PSPC1-207ENST00000635251 SNX12Q9UMY4 172 aa11.88□□□□□ -0.51
PSPC1-207ENST00000635251 SIK3Q9Y2K2 1263 aa11.88□□□□□ -0.51
PSPC1-207ENST00000635251 CAPN6Q9Y6Q1 641 aa11.88□□□□□ -0.51
PSPC1-207ENST00000635251 DDX60LQ5H9U9 1706 aaKnown RBP11.88□□□□□ -0.51
PSPC1-207ENST00000635251 HNRNPH3P31942 346 aaKnown RBP11.88□□□□□ -0.51
PSPC1-207ENST00000635251 RHBDL3P58872 404 aa11.88□□□□□ -0.51
PSPC1-207ENST00000635251 CCDC181Q5TID7 509 aa11.88□□□□□ -0.51
PSPC1-207ENST00000635251 AFAP1L1Q8TED9 768 aa11.88□□□□□ -0.51
PSPC1-207ENST00000635251 COG1Q8WTW3 980 aa11.88□□□□□ -0.51
PSPC1-207ENST00000635251 TULP2O00295 520 aa11.87□□□□□ -0.51
PSPC1-207ENST00000635251 IVLP07476 585 aa11.87□□□□□ -0.51
PSPC1-207ENST00000635251 MATR3P43243 847 aaKnown RBP eCLIP11.87□□□□□ -0.51
PSPC1-207ENST00000635251 MAGEA1P43355 309 aa11.87□□□□□ -0.51
PSPC1-207ENST00000635251 NAP1L1P55209 391 aaKnown RBP11.87□□□□□ -0.51
PSPC1-207ENST00000635251 ATP2B2Q01814 1243 aa11.87□□□□□ -0.51
PSPC1-207ENST00000635251 PSMD2Q13200 908 aa11.87□□□□□ -0.51
PSPC1-207ENST00000635251 PDIA5Q14554 519 aa11.87□□□□□ -0.51
PSPC1-207ENST00000635251 CCDC40Q4G0X9 1142 aa11.87□□□□□ -0.51
PSPC1-207ENST00000635251 ASPRV1Q53RT3 343 aa11.87□□□□□ -0.51
PSPC1-207ENST00000635251 TDRD12Q587J7 1177 aaKnown RBP11.87□□□□□ -0.51
PSPC1-207ENST00000635251 FAM182BQ5T319 152 aa11.87□□□□□ -0.51
PSPC1-207ENST00000635251 C8orf37Q96NL8 207 aa11.87□□□□□ -0.51
PSPC1-207ENST00000635251 HINFPQ9BQA5 517 aa11.87□□□□□ -0.51
PSPC1-207ENST00000635251 NUDT12Q9BQG2 462 aa11.87□□□□□ -0.51
PSPC1-207ENST00000635251 SELENOOQ9BVL4 669 aa11.87□□□□□ -0.51
PSPC1-207ENST00000635251 SSBP05455 408 aaKnown RBP eCLIP11.86□□□□□ -0.51
PSPC1-207ENST00000635251 IL1R1P14778 569 aa11.86□□□□□ -0.51
PSPC1-207ENST00000635251 AARSP49588 968 aaKnown RBP eCLIP11.86□□□□□ -0.51
PSPC1-207ENST00000635251 UBE2SQ16763 222 aa11.86□□□□□ -0.51
PSPC1-207ENST00000635251 CCNI2Q6ZMN8 369 aaPredicted RBP11.86□□□□□ -0.51
PSPC1-207ENST00000635251 NGLY1Q96IV0 654 aa11.86□□□□□ -0.51
PSPC1-207ENST00000635251 PSMB7Q99436 277 aa11.86□□□□□ -0.51
PSPC1-207ENST00000635251 RIC8AQ9NPQ8 531 aa11.86□□□□□ -0.51
PSPC1-207ENST00000635251 MTMR4Q9NYA4 1195 aa11.86□□□□□ -0.51
PSPC1-207ENST00000635251 ABCB11O95342 1321 aa11.86□□□□□ -0.51
PSPC1-207ENST00000635251 SYF2O95926 243 aaKnown RBP11.86□□□□□ -0.51
PSPC1-207ENST00000635251 MYBL2P10244 700 aa11.86□□□□□ -0.51
PSPC1-207ENST00000635251 DPP8Q6V1X1 898 aaPredicted RBP11.86□□□□□ -0.51
PSPC1-207ENST00000635251 KCNK18Q7Z418 384 aa11.86□□□□□ -0.51
PSPC1-207ENST00000635251 CREG2Q8IUH2 290 aa11.86□□□□□ -0.51
PSPC1-207ENST00000635251 MYOCDQ8IZQ8 938 aa11.86□□□□□ -0.51
PSPC1-207ENST00000635251 DDX25Q9UHL0 483 aaKnown RBP11.86□□□□□ -0.51
PSPC1-207ENST00000635251 HYOU1Q9Y4L1 999 aa11.86□□□□□ -0.51
PSPC1-207ENST00000635251 TRAF5O00463 557 aa11.85□□□□□ -0.51
PSPC1-207ENST00000635251 AKR1B1P15121 316 aa11.85□□□□□ -0.51
PSPC1-207ENST00000635251 TCP1P17987 556 aaKnown RBP11.85□□□□□ -0.51
PSPC1-207ENST00000635251 PAFAH1B1P43034 410 aa11.85□□□□□ -0.51
PSPC1-207ENST00000635251 GFPT1Q06210 699 aaPredicted RBP11.85□□□□□ -0.51
PSPC1-207ENST00000635251 COASYQ13057 564 aa11.85□□□□□ -0.51
PSPC1-207ENST00000635251 NFRKBQ6P4R8 1299 aa11.85□□□□□ -0.51
PSPC1-207ENST00000635251 PDXDC1Q6P996 788 aa11.85□□□□□ -0.51
PSPC1-207ENST00000635251 LRRC55Q6ZSA7 311 aa11.85□□□□□ -0.51
PSPC1-207ENST00000635251 CLEC10AQ8IUN9 316 aa11.85□□□□□ -0.51
PSPC1-207ENST00000635251 MMGT1Q8N4V1 131 aa11.85□□□□□ -0.51
PSPC1-207ENST00000635251 CCDC155Q8N6L0 562 aa11.85□□□□□ -0.51
PSPC1-207ENST00000635251 ANKRD13CQ8N6S4 541 aa11.85□□□□□ -0.51
PSPC1-207ENST00000635251 TBC1D22AQ8WUA7 517 aa11.85□□□□□ -0.51
PSPC1-207ENST00000635251 RIN2Q8WYP3 895 aaPredicted RBP11.85□□□□□ -0.51
PSPC1-207ENST00000635251 RBM17Q96I25 401 aaKnown RBP11.85□□□□□ -0.51
PSPC1-207ENST00000635251 OSBPL9Q96SU4 736 aa11.85□□□□□ -0.51
PSPC1-207ENST00000635251 TSPYL1Q9H0U9 437 aa11.85□□□□□ -0.51
PSPC1-207ENST00000635251 NLRC4Q9NPP4 1024 aa11.85□□□□□ -0.51
PSPC1-207ENST00000635251 BMP2KQ9NSY1 1161 aaPredicted RBP11.85□□□□□ -0.51
PSPC1-207ENST00000635251 PNMA6FA0A0J9YX94 578 aa11.85□□□□□ -0.51
PSPC1-207ENST00000635251 C6orf229H3BNL8 230 aa11.85□□□□□ -0.51
PSPC1-207ENST00000635251 HOXA7P31268 230 aaPredicted RBP11.85□□□□□ -0.51
PSPC1-207ENST00000635251 CXCR5P32302 372 aa11.85□□□□□ -0.51
PSPC1-207ENST00000635251 GGCXP38435 758 aa11.85□□□□□ -0.51
PSPC1-207ENST00000635251 RASSF7Q02833 373 aa11.85□□□□□ -0.51
PSPC1-207ENST00000635251 TMEM119Q4V9L6 283 aa11.85□□□□□ -0.51
PSPC1-207ENST00000635251 PRR5LQ6MZQ0 368 aa11.85□□□□□ -0.51
PSPC1-207ENST00000635251 FAM196AQ6ZSG2 479 aa11.85□□□□□ -0.51
PSPC1-207ENST00000635251 GLIS3Q8NEA6 775 aa11.85□□□□□ -0.51
PSPC1-207ENST00000635251 FAM163AQ96GL9 167 aaPredicted RBP11.85□□□□□ -0.51
PSPC1-207ENST00000635251 ZFP91Q96JP5 570 aaPredicted RBP11.85□□□□□ -0.51
PSPC1-207ENST00000635251 LRRC1Q9BTT6 524 aa11.85□□□□□ -0.51
PSPC1-207ENST00000635251 PANK4Q9NVE7 773 aa11.85□□□□□ -0.51
PSPC1-207ENST00000635251 TBC1D7Q9P0N9 293 aa11.85□□□□□ -0.51
PSPC1-207ENST00000635251 FAM184BQ9ULE4 1060 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 96.4 ms