RNA–Protein interactions for RNA: ENST00000631247.1

UBE3A-223, Transcript of ubiquitin protein ligase E3A, human

TSL 5

Gene UBE3A, Length 789 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBE3A-223	ENST00000631247	ZNF576	Q9H609	170 aa		12.11	□□□□□ -0.47
UBE3A-223	ENST00000631247	CNNM2	Q9H8M5	875 aa		12.11	□□□□□ -0.47
UBE3A-223	ENST00000631247	MSRA	Q9UJ68	235 aa		12.11	□□□□□ -0.47
UBE3A-223	ENST00000631247	XIRP2	A4UGR9	3374 aa		12.11	□□□□□ -0.47
UBE3A-223	ENST00000631247	GRIN2D	O15399	1336 aa		12.11	□□□□□ -0.47
UBE3A-223	ENST00000631247	TNKS	O95271	1327 aa		12.11	□□□□□ -0.47
UBE3A-223	ENST00000631247	ABCB11	O95342	1321 aa		12.11	□□□□□ -0.47
UBE3A-223	ENST00000631247	UMODL1	Q5DID0	1318 aa		12.11	□□□□□ -0.47
UBE3A-223	ENST00000631247	ZBBX	A8MT70	800 aa		12.1	□□□□□ -0.47
UBE3A-223	ENST00000631247	IGHD	P01880	384 aa		12.1	□□□□□ -0.47
UBE3A-223	ENST00000631247	PARP1	P09874	1014 aa	Known RBP	12.1	□□□□□ -0.47
UBE3A-223	ENST00000631247	CHMP4BP1	P59074	171 aa		12.1	□□□□□ -0.47
UBE3A-223	ENST00000631247	TTLL4	Q14679	1199 aa		12.1	□□□□□ -0.47
UBE3A-223	ENST00000631247	GRIN2C	Q14957	1233 aa		12.1	□□□□□ -0.47
UBE3A-223	ENST00000631247	C16orf59	Q7L2K0	433 aa		12.1	□□□□□ -0.47
UBE3A-223	ENST00000631247	OTOP2	Q7RTS6	562 aa		12.1	□□□□□ -0.47
UBE3A-223	ENST00000631247	RPUSD2	Q8IZ73	545 aa	Known RBP	12.1	□□□□□ -0.47
UBE3A-223	ENST00000631247	ZNF687	Q8N1G0	1237 aa		12.1	□□□□□ -0.47
UBE3A-223	ENST00000631247	DSCC1	Q9BVC3	393 aa		12.1	□□□□□ -0.47
UBE3A-223	ENST00000631247	NOC4L	Q9BVI4	516 aa	Known RBP	12.1	□□□□□ -0.47
UBE3A-223	ENST00000631247	PBX4	Q9BYU1	374 aa		12.1	□□□□□ -0.47
UBE3A-223	ENST00000631247	ALDH8A1	Q9H2A2	487 aa	Predicted RBP	12.1	□□□□□ -0.47
UBE3A-223	ENST00000631247	CPVL	Q9H3G5	476 aa		12.1	□□□□□ -0.47
UBE3A-223	ENST00000631247	NOD1	Q9Y239	953 aa		12.1	□□□□□ -0.47
UBE3A-223	ENST00000631247	REV3L	O60673	3130 aa		12.1	□□□□□ -0.47
UBE3A-223	ENST00000631247	GBF1	Q92538	1859 aa		12.1	□□□□□ -0.47
UBE3A-223	ENST00000631247	MUC3A	Q02505	3323 aa		12.09	□□□□□ -0.47
UBE3A-223	ENST00000631247	TANC1	Q9C0D5	1861 aa		12.09	□□□□□ -0.47
UBE3A-223	ENST00000631247	RBM47	A0AV96	593 aa	Known RBP	12.09	□□□□□ -0.47
UBE3A-223	ENST00000631247	GRXCR1	A8MXD5	290 aa		12.09	□□□□□ -0.47
UBE3A-223	ENST00000631247	KPNA6	O60684	536 aa		12.09	□□□□□ -0.47
UBE3A-223	ENST00000631247	TXN	P10599	105 aa	Known RBP	12.09	□□□□□ -0.47
UBE3A-223	ENST00000631247	EDNRB	P24530	442 aa		12.09	□□□□□ -0.47
UBE3A-223	ENST00000631247	PBX2	P40425	430 aa		12.09	□□□□□ -0.47
UBE3A-223	ENST00000631247	PURA	Q00577	322 aa	Known RBP	12.09	□□□□□ -0.47
UBE3A-223	ENST00000631247	IFIT1B	Q5T764	474 aa	Known RBP	12.09	□□□□□ -0.47
UBE3A-223	ENST00000631247	MCF2L2	Q86YR7	1114 aa		12.09	□□□□□ -0.47
UBE3A-223	ENST00000631247	ADGRF4	Q8IZF3	695 aa		12.09	□□□□□ -0.47
UBE3A-223	ENST00000631247	ENAH	Q8N8S7	591 aa	Predicted RBP	12.09	□□□□□ -0.47
UBE3A-223	ENST00000631247	HERVK_113	Q902F9	699 aa		12.09	□□□□□ -0.47
UBE3A-223	ENST00000631247	COL25A1	Q9BXS0	654 aa	Predicted RBP	12.09	□□□□□ -0.47
UBE3A-223	ENST00000631247	WNT8A	Q9H1J5	351 aa		12.09	□□□□□ -0.47
UBE3A-223	ENST00000631247	VAT1L	Q9HCJ6	419 aa		12.09	□□□□□ -0.47
UBE3A-223	ENST00000631247	TRMT13	Q9NUP7	481 aa	Known RBP	12.09	□□□□□ -0.47
UBE3A-223	ENST00000631247	PFKM	P08237	780 aa		12.08	□□□□□ -0.48
UBE3A-223	ENST00000631247	CYP2C9	P11712	490 aa		12.08	□□□□□ -0.48
UBE3A-223	ENST00000631247	TRDN	Q13061	729 aa		12.08	□□□□□ -0.48
UBE3A-223	ENST00000631247	RASIP1	Q5U651	963 aa		12.08	□□□□□ -0.48
UBE3A-223	ENST00000631247	FBXO11	Q86XK2	927 aa		12.08	□□□□□ -0.48
UBE3A-223	ENST00000631247	RGS22	Q8NE09	1264 aa		12.08	□□□□□ -0.48
UBE3A-223	ENST00000631247	NSUN6	Q8TEA1	469 aa	Known RBP	12.08	□□□□□ -0.48
UBE3A-223	ENST00000631247	SCLY	Q96I15	445 aa		12.08	□□□□□ -0.48
UBE3A-223	ENST00000631247	SLC28A3	Q9HAS3	691 aa		12.08	□□□□□ -0.48
UBE3A-223	ENST00000631247	ZSWIM5	Q9P217	1185 aa		12.08	□□□□□ -0.48
UBE3A-223	ENST00000631247	MRPL11	Q9Y3B7	192 aa	Known RBP	12.08	□□□□□ -0.48
UBE3A-223	ENST00000631247	SLC4A7	Q9Y6M7	1214 aa		12.08	□□□□□ -0.48
UBE3A-223	ENST00000631247		A6NJR5	290 aa		12.07	□□□□□ -0.48
UBE3A-223	ENST00000631247	ACTN1	P12814	892 aa		12.07	□□□□□ -0.48
UBE3A-223	ENST00000631247	STXBP2	Q15833	593 aa		12.07	□□□□□ -0.48
UBE3A-223	ENST00000631247	QRICH1	Q2TAL8	776 aa		12.07	□□□□□ -0.48
UBE3A-223	ENST00000631247	NBPF20	Q3BBV1	942 aa		12.07	□□□□□ -0.48
UBE3A-223	ENST00000631247	ARHGEF16	Q5VV41	709 aa		12.07	□□□□□ -0.48
UBE3A-223	ENST00000631247	SEPT14	Q6ZU15	432 aa		12.07	□□□□□ -0.48
UBE3A-223	ENST00000631247	RETREG2	Q8NC44	543 aa		12.07	□□□□□ -0.48
UBE3A-223	ENST00000631247	ANKS1A	Q92625	1134 aa		12.07	□□□□□ -0.48
UBE3A-223	ENST00000631247	COPS5	Q92905	334 aa		12.07	□□□□□ -0.48
UBE3A-223	ENST00000631247	KHSRP	Q92945	711 aa	Known RBP eCLIP	12.07	□□□□□ -0.48
UBE3A-223	ENST00000631247	RMDN3	Q96TC7	470 aa		12.07	□□□□□ -0.48
UBE3A-223	ENST00000631247	MAF1	Q9H063	256 aa		12.07	□□□□□ -0.48
UBE3A-223	ENST00000631247	PRDM12	Q9H4Q4	367 aa		12.07	□□□□□ -0.48
UBE3A-223	ENST00000631247	CXXC1	Q9P0U4	656 aa	Predicted RBP	12.07	□□□□□ -0.48
UBE3A-223	ENST00000631247	KIAA1217	Q5T5P2	1943 aa		12.07	□□□□□ -0.48
UBE3A-223	ENST00000631247	SCN10A	Q9Y5Y9	1956 aa		12.07	□□□□□ -0.48
UBE3A-223	ENST00000631247	ERICH2	A1L162	156 aa		12.06	□□□□□ -0.48
UBE3A-223	ENST00000631247	CFB	P00751	764 aa		12.06	□□□□□ -0.48
UBE3A-223	ENST00000631247	GH1	P01241	217 aa		12.06	□□□□□ -0.48
UBE3A-223	ENST00000631247	EIF2AK2	P19525	551 aa	Known RBP	12.06	□□□□□ -0.48
UBE3A-223	ENST00000631247	PPP2R2D	Q66LE6	453 aa		12.06	□□□□□ -0.48
UBE3A-223	ENST00000631247	NFRKB	Q6P4R8	1299 aa		12.06	□□□□□ -0.48
UBE3A-223	ENST00000631247	CHST3	Q7LGC8	479 aa		12.06	□□□□□ -0.48
UBE3A-223	ENST00000631247	DEFB128	Q7Z7B8	93 aa		12.06	□□□□□ -0.48
UBE3A-223	ENST00000631247	CCDC155	Q8N6L0	562 aa		12.06	□□□□□ -0.48
UBE3A-223	ENST00000631247	SYTL5	Q8TDW5	730 aa	Predicted RBP	12.06	□□□□□ -0.48
UBE3A-223	ENST00000631247	RUFY2	Q8WXA3	655 aa		12.06	□□□□□ -0.48
UBE3A-223	ENST00000631247	PPM1E	Q8WY54	764 aa		12.06	□□□□□ -0.48
UBE3A-223	ENST00000631247	IWS1	Q96ST2	819 aa		12.06	□□□□□ -0.48
UBE3A-223	ENST00000631247	AMN	Q9BXJ7	453 aa		12.06	□□□□□ -0.48
UBE3A-223	ENST00000631247	NKX2-4	Q9H2Z4	354 aa		12.06	□□□□□ -0.48
UBE3A-223	ENST00000631247	SCN5A	Q14524	2016 aa		12.05	□□□□□ -0.48
UBE3A-223	ENST00000631247	KLRF2	D3W0D1	207 aa		12.05	□□□□□ -0.48
UBE3A-223	ENST00000631247	ARIH2	O95376	493 aa		12.05	□□□□□ -0.48
UBE3A-223	ENST00000631247	ATP2A2	P16615	1042 aa	Known RBP	12.05	□□□□□ -0.48
UBE3A-223	ENST00000631247	IGFBP4	P22692	258 aa		12.05	□□□□□ -0.48
UBE3A-223	ENST00000631247	RFC2	P35250	354 aa		12.05	□□□□□ -0.48
UBE3A-223	ENST00000631247	PTPN11	Q06124	597 aa	Predicted RBP	12.05	□□□□□ -0.48
UBE3A-223	ENST00000631247	TRAF1	Q13077	416 aa		12.05	□□□□□ -0.48
UBE3A-223	ENST00000631247	BFSP2	Q13515	415 aa		12.05	□□□□□ -0.48
UBE3A-223	ENST00000631247	LY6K	Q17RY6	165 aa		12.05	□□□□□ -0.48
UBE3A-223	ENST00000631247	TTC22	Q5TAA0	569 aa		12.05	□□□□□ -0.48
UBE3A-223	ENST00000631247	RALYL	Q86SE5	291 aa	Known RBP	12.05	□□□□□ -0.48

Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms