RNA–Protein interactions for RNA: ENST00000629104.1

CHD2-216, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 649 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-216ENST00000629104 NECAB2Q7Z6G3 386 aa10.18□□□□□ -0.78
CHD2-216ENST00000629104 RNF180Q86T96 592 aa10.18□□□□□ -0.78
CHD2-216ENST00000629104 VSIG10LQ86VR7 867 aa10.18□□□□□ -0.78
CHD2-216ENST00000629104 IL27Q8NEV9 243 aa10.18□□□□□ -0.78
CHD2-216ENST00000629104 CCDC148Q8NFR7 591 aa10.18□□□□□ -0.78
CHD2-216ENST00000629104 WDR11Q9BZH6 1224 aa10.18□□□□□ -0.78
CHD2-216ENST00000629104 ZMYND12Q9H0C1 365 aa10.18□□□□□ -0.78
CHD2-216ENST00000629104 GLT8D2Q9H1C3 349 aa10.18□□□□□ -0.78
CHD2-216ENST00000629104 UPF3AQ9H1J1 476 aaKnown RBP10.18□□□□□ -0.78
CHD2-216ENST00000629104 SH3GLB2Q9NR46 395 aa10.18□□□□□ -0.78
CHD2-216ENST00000629104 VPS54Q9P1Q0 977 aa10.18□□□□□ -0.78
CHD2-216ENST00000629104 PCDHA6Q9UN73 950 aa10.18□□□□□ -0.78
CHD2-216ENST00000629104 PCDHA8Q9Y5H6 950 aa10.18□□□□□ -0.78
CHD2-216ENST00000629104 MYADML2A6NDP7 307 aa10.17□□□□□ -0.78
CHD2-216ENST00000629104 SPDYE3A6NKU9 549 aa10.17□□□□□ -0.78
CHD2-216ENST00000629104 KBTBD13C9JR72 458 aa10.17□□□□□ -0.78
CHD2-216ENST00000629104 ST18O60284 1047 aa10.17□□□□□ -0.78
CHD2-216ENST00000629104 STAM2O75886 525 aa10.17□□□□□ -0.78
CHD2-216ENST00000629104 RGS20O76081 388 aa10.17□□□□□ -0.78
CHD2-216ENST00000629104 PTGS1P23219 599 aa10.17□□□□□ -0.78
CHD2-216ENST00000629104 CST5P28325 142 aaPredicted RBP10.17□□□□□ -0.78
CHD2-216ENST00000629104 CLK2P49760 499 aaKnown RBP10.17□□□□□ -0.78
CHD2-216ENST00000629104 NKX3-2P78367 333 aa10.17□□□□□ -0.78
CHD2-216ENST00000629104 IRX5P78411 483 aaPredicted RBP10.17□□□□□ -0.78
CHD2-216ENST00000629104 MRPS9P82933 396 aaKnown RBP10.17□□□□□ -0.78
CHD2-216ENST00000629104 ST3GAL1Q11201 340 aa10.17□□□□□ -0.78
CHD2-216ENST00000629104 TTLL4Q14679 1199 aa10.17□□□□□ -0.78
CHD2-216ENST00000629104 PCNX4Q63HM2 1172 aa10.17□□□□□ -0.78
CHD2-216ENST00000629104 SEPT14Q6ZU15 432 aa10.17□□□□□ -0.78
CHD2-216ENST00000629104 TLK2Q86UE8 772 aa10.17□□□□□ -0.78
CHD2-216ENST00000629104 KLHDC9Q8NEP7 349 aa10.17□□□□□ -0.78
CHD2-216ENST00000629104 SCFD2Q8WU76 684 aa10.17□□□□□ -0.78
CHD2-216ENST00000629104 ZSCAN31Q96LW9 406 aaPredicted RBP10.17□□□□□ -0.78
CHD2-216ENST00000629104 C11orf49Q9H6J7 331 aa10.17□□□□□ -0.78
CHD2-216ENST00000629104 SPC25Q9HBM1 224 aa10.17□□□□□ -0.78
CHD2-216ENST00000629104 C6orf50Q9HD87 102 aa10.17□□□□□ -0.78
CHD2-216ENST00000629104 Q9Y3F1 56 aa10.17□□□□□ -0.78
CHD2-216ENST00000629104 DOCK5Q9H7D0 1870 aa10.17□□□□□ -0.78
CHD2-216ENST00000629104 TNRC18O15417 2968 aaPredicted RBP10.17□□□□□ -0.78
CHD2-216ENST00000629104 ADAMTS3O15072 1205 aa10.16□□□□□ -0.78
CHD2-216ENST00000629104 NKRFO15226 690 aaKnown RBP eCLIP10.16□□□□□ -0.78
CHD2-216ENST00000629104 CTAGE5O15320 804 aa10.16□□□□□ -0.78
CHD2-216ENST00000629104 DTNBO60941 627 aa10.16□□□□□ -0.78
CHD2-216ENST00000629104 ARIH2O95376 493 aa10.16□□□□□ -0.78
CHD2-216ENST00000629104 FOSP01100 380 aaPredicted RBP10.16□□□□□ -0.78
CHD2-216ENST00000629104 C6orf222P0C671 652 aaPredicted RBP10.16□□□□□ -0.78
CHD2-216ENST00000629104 TXNP10599 105 aaKnown RBP10.16□□□□□ -0.78
CHD2-216ENST00000629104 FDPSP14324 419 aaKnown RBP10.16□□□□□ -0.78
CHD2-216ENST00000629104 GNA11P29992 359 aa10.16□□□□□ -0.78
CHD2-216ENST00000629104 AP3B2Q13367 1082 aa10.16□□□□□ -0.78
CHD2-216ENST00000629104 CCSAPQ6IQ19 270 aaPredicted RBP10.16□□□□□ -0.78
CHD2-216ENST00000629104 XRRA1Q6P2D8 792 aa10.16□□□□□ -0.78
CHD2-216ENST00000629104 CCDC62Q6P9F0 684 aa10.16□□□□□ -0.78
CHD2-216ENST00000629104 FAM177A1Q8N128 213 aaPredicted RBP10.16□□□□□ -0.78
CHD2-216ENST00000629104 NSUN7Q8NE18 718 aaKnown RBP10.16□□□□□ -0.78
CHD2-216ENST00000629104 ZFP91Q96JP5 570 aaPredicted RBP10.16□□□□□ -0.78
CHD2-216ENST00000629104 PGBD1Q96JS3 809 aa10.16□□□□□ -0.78
CHD2-216ENST00000629104 AIFM3Q96NN9 605 aa10.16□□□□□ -0.78
CHD2-216ENST00000629104 TSEN34Q9BSV6 310 aaKnown RBP10.16□□□□□ -0.78
CHD2-216ENST00000629104 AP5M1Q9H0R1 490 aa10.16□□□□□ -0.78
CHD2-216ENST00000629104 EHMT1Q9H9B1 1298 aa10.16□□□□□ -0.78
CHD2-216ENST00000629104 SH2B1Q9NRF2 756 aaPredicted RBP10.16□□□□□ -0.78
CHD2-216ENST00000629104 TMEM260Q9NX78 707 aa10.16□□□□□ -0.78
CHD2-216ENST00000629104 ORC3Q9UBD5 711 aaPredicted RBP10.16□□□□□ -0.78
CHD2-216ENST00000629104 PHF24Q9UPV7 400 aa10.16□□□□□ -0.78
CHD2-216ENST00000629104 MOXD2PA6NHM9 499 aa10.15□□□□□ -0.78
CHD2-216ENST00000629104 DYNC1LI2O43237 492 aaPredicted RBP10.15□□□□□ -0.78
CHD2-216ENST00000629104 CD2BP2O95400 341 aaKnown RBP10.15□□□□□ -0.78
CHD2-216ENST00000629104 NLRP5P59047 1200 aa10.15□□□□□ -0.78
CHD2-216ENST00000629104 KCNA10Q16322 511 aa10.15□□□□□ -0.78
CHD2-216ENST00000629104 LY6KQ17RY6 165 aa10.15□□□□□ -0.78
CHD2-216ENST00000629104 GNPTABQ3T906 1256 aa10.15□□□□□ -0.78
CHD2-216ENST00000629104 GNASQ5JWF2 1037 aa10.15□□□□□ -0.78
CHD2-216ENST00000629104 JAKMIP3Q5VZ66 844 aa10.15□□□□□ -0.78
CHD2-216ENST00000629104 MCTP2Q6DN12 878 aa10.15□□□□□ -0.78
CHD2-216ENST00000629104 KCNV1Q6PIU1 500 aa10.15□□□□□ -0.78
CHD2-216ENST00000629104 CCDC83Q8IWF9 413 aa10.15□□□□□ -0.78
CHD2-216ENST00000629104 REXO1Q8N1G1 1221 aaKnown RBP10.15□□□□□ -0.78
CHD2-216ENST00000629104 OR6J1Q8NGC5 347 aa10.15□□□□□ -0.78
CHD2-216ENST00000629104 BICD2Q8TD16 824 aa10.15□□□□□ -0.78
CHD2-216ENST00000629104 WASF1Q92558 559 aa10.15□□□□□ -0.78
CHD2-216ENST00000629104 COPS5Q92905 334 aa10.15□□□□□ -0.78
CHD2-216ENST00000629104 INPP4AQ96PE3 977 aaPredicted RBP10.15□□□□□ -0.78
CHD2-216ENST00000629104 HTATIP2Q9BUP3 242 aa10.15□□□□□ -0.78
CHD2-216ENST00000629104 ANO3Q9BYT9 981 aa10.15□□□□□ -0.78
CHD2-216ENST00000629104 SENP6Q9GZR1 1112 aaPredicted RBP10.15□□□□□ -0.78
CHD2-216ENST00000629104 RTEL1Q9NZ71 1219 aa10.15□□□□□ -0.78
CHD2-216ENST00000629104 DDX41Q9UJV9 622 aaKnown RBP10.15□□□□□ -0.78
CHD2-216ENST00000629104 PCDHA4Q9UN74 947 aa10.15□□□□□ -0.78
CHD2-216ENST00000629104 MRVI1Q9Y6F6 885 aa10.15□□□□□ -0.78
CHD2-216ENST00000629104 A0A1W2PQ45 241 aaPredicted RBP10.14□□□□□ -0.79
CHD2-216ENST00000629104 A0A1W2PQY0 241 aa10.14□□□□□ -0.79
CHD2-216ENST00000629104 FIBPO43427 364 aa10.14□□□□□ -0.79
CHD2-216ENST00000629104 JAK2O60674 1132 aa10.14□□□□□ -0.79
CHD2-216ENST00000629104 GH1P01241 217 aa10.14□□□□□ -0.79
CHD2-216ENST00000629104 ASGR1P07306 291 aa10.14□□□□□ -0.79
CHD2-216ENST00000629104 TGFB3P10600 412 aa10.14□□□□□ -0.79
CHD2-216ENST00000629104 XBP1P17861 261 aa10.14□□□□□ -0.79
CHD2-216ENST00000629104 ICAM3P32942 547 aa10.14□□□□□ -0.79
CHD2-216ENST00000629104 SREBF1P36956 1147 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms