RNA–Protein interactions for RNA: ENST00000628906.2

LINC00649-220, long intergenic non-protein coding RNA 649, humanhuman

TSL 5

Gene LINC00649, Length 625 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00649-220ENST00000628906 LARP1BQ659C4 914 aaKnown RBP7.4□□□□□ -1.22
LINC00649-220ENST00000628906 CCDC102BQ68D86 513 aa7.4□□□□□ -1.22
LINC00649-220ENST00000628906 RBM23Q86U06 439 aaKnown RBP7.4□□□□□ -1.22
LINC00649-220ENST00000628906 SIX5Q8N196 739 aa7.4□□□□□ -1.22
LINC00649-220ENST00000628906 ZBTB44Q8NCP5 570 aa7.4□□□□□ -1.22
LINC00649-220ENST00000628906 DBF4BQ8NFT6 615 aa7.4□□□□□ -1.22
LINC00649-220ENST00000628906 VN1R2Q8NFZ6 395 aa7.4□□□□□ -1.22
LINC00649-220ENST00000628906 KLHDC4Q8TBB5 520 aa7.4□□□□□ -1.22
LINC00649-220ENST00000628906 SPPL3Q8TCT6 385 aa7.4□□□□□ -1.22
LINC00649-220ENST00000628906 PIK3R5Q8WYR1 880 aa7.4□□□□□ -1.22
LINC00649-220ENST00000628906 DHX38Q92620 1227 aaKnown RBP7.4□□□□□ -1.22
LINC00649-220ENST00000628906 MAP4K1Q92918 833 aa7.4□□□□□ -1.22
LINC00649-220ENST00000628906 IL17RAQ96F46 866 aa7.4□□□□□ -1.22
LINC00649-220ENST00000628906 SUCLG2Q96I99 432 aa7.4□□□□□ -1.22
LINC00649-220ENST00000628906 NEK1Q96PY6 1258 aa7.4□□□□□ -1.22
LINC00649-220ENST00000628906 PHF12Q96QT6 1004 aa7.4□□□□□ -1.22
LINC00649-220ENST00000628906 PDGFCQ9NRA1 345 aa7.4□□□□□ -1.22
LINC00649-220ENST00000628906 RXFP3Q9NSD7 469 aa7.4□□□□□ -1.22
LINC00649-220ENST00000628906 C9orf78Q9NZ63 289 aaPredicted RBP7.4□□□□□ -1.22
LINC00649-220ENST00000628906 LIMD1Q9UGP4 676 aa7.4□□□□□ -1.22
LINC00649-220ENST00000628906 SMG5Q9UPR3 1016 aaKnown RBP7.4□□□□□ -1.22
LINC00649-220ENST00000628906 WASF3Q9UPY6 502 aa7.4□□□□□ -1.22
LINC00649-220ENST00000628906 RIPK3Q9Y572 518 aa7.4□□□□□ -1.22
LINC00649-220ENST00000628906 PCDHGA2Q9Y5H1 932 aa7.4□□□□□ -1.22
LINC00649-220ENST00000628906 SPTAN1Q13813 2472 aaKnown RBP7.4□□□□□ -1.23
LINC00649-220ENST00000628906 ADAMTS20P59510 1910 aa7.39□□□□□ -1.23
LINC00649-220ENST00000628906 FSD2A1L4K1 749 aa7.39□□□□□ -1.23
LINC00649-220ENST00000628906 WDR46O15213 610 aaKnown RBP7.39□□□□□ -1.23
LINC00649-220ENST00000628906 LRP3O75074 770 aa7.39□□□□□ -1.23
LINC00649-220ENST00000628906 PYGBP11216 843 aa7.39□□□□□ -1.23
LINC00649-220ENST00000628906 PLCG2P16885 1265 aa7.39□□□□□ -1.23
LINC00649-220ENST00000628906 RBM10P98175 930 aaKnown RBP7.39□□□□□ -1.23
LINC00649-220ENST00000628906 NAALADL2Q58DX5 795 aa7.39□□□□□ -1.23
LINC00649-220ENST00000628906 SYCE2Q6PIF2 218 aa7.39□□□□□ -1.23
LINC00649-220ENST00000628906 PDZD3Q86UT5 571 aa7.39□□□□□ -1.23
LINC00649-220ENST00000628906 FAM133AQ8N9E0 248 aa7.39□□□□□ -1.23
LINC00649-220ENST00000628906 GLIS3Q8NEA6 775 aa7.39□□□□□ -1.23
LINC00649-220ENST00000628906 PPP1R13LQ8WUF5 828 aa7.39□□□□□ -1.23
LINC00649-220ENST00000628906 GATA6Q92908 595 aa7.39□□□□□ -1.23
LINC00649-220ENST00000628906 TEX13BQ9BXU2 312 aa7.39□□□□□ -1.23
LINC00649-220ENST00000628906 EHD4Q9H223 541 aa7.39□□□□□ -1.23
LINC00649-220ENST00000628906 TLE6Q9H808 572 aa7.39□□□□□ -1.23
LINC00649-220ENST00000628906 GPR108Q9NPR9 543 aa7.39□□□□□ -1.23
LINC00649-220ENST00000628906 GPHNQ9NQX3 736 aaPredicted RBP7.39□□□□□ -1.23
LINC00649-220ENST00000628906 TSHZ2Q9NRE2 1034 aa7.39□□□□□ -1.23
LINC00649-220ENST00000628906 FBXO28Q9NVF7 368 aa7.39□□□□□ -1.23
LINC00649-220ENST00000628906 SERPINB13Q9UIV8 391 aa7.39□□□□□ -1.23
LINC00649-220ENST00000628906 LOC101059915A0A1B0GWI6 518 aaPredicted RBP7.38□□□□□ -1.23
LINC00649-220ENST00000628906 RBAK-RBAKDNI3L0D1 243 aa7.38□□□□□ -1.23
LINC00649-220ENST00000628906 EYA2O00167 538 aa7.38□□□□□ -1.23
LINC00649-220ENST00000628906 ATP2A1O14983 1001 aa7.38□□□□□ -1.23
LINC00649-220ENST00000628906 KPNA6O60684 536 aa7.38□□□□□ -1.23
LINC00649-220ENST00000628906 LILRB5O75023 590 aa7.38□□□□□ -1.23
LINC00649-220ENST00000628906 UPP2O95045 317 aa7.38□□□□□ -1.23
LINC00649-220ENST00000628906 BAG3O95817 575 aa7.38□□□□□ -1.23
LINC00649-220ENST00000628906 MYL3P08590 195 aa7.38□□□□□ -1.23
LINC00649-220ENST00000628906 HOXB8P17481 243 aaPredicted RBP7.38□□□□□ -1.23
LINC00649-220ENST00000628906 CPT1AP50416 773 aa7.38□□□□□ -1.23
LINC00649-220ENST00000628906 PLCD1P51178 756 aa7.38□□□□□ -1.23
LINC00649-220ENST00000628906 GSE1Q14687 1217 aa7.38□□□□□ -1.23
LINC00649-220ENST00000628906 ATP2B3Q16720 1220 aa7.38□□□□□ -1.23
LINC00649-220ENST00000628906 DUSP28Q4G0W2 176 aa7.38□□□□□ -1.23
LINC00649-220ENST00000628906 PLEKHG4Q58EX7 1191 aa7.38□□□□□ -1.23
LINC00649-220ENST00000628906 ANKRD54Q6NXT1 300 aa7.38□□□□□ -1.23
LINC00649-220ENST00000628906 ATG9AQ7Z3C6 839 aa7.38□□□□□ -1.23
LINC00649-220ENST00000628906 SESTD1Q86VW0 696 aa7.38□□□□□ -1.23
LINC00649-220ENST00000628906 SIAH1Q8IUQ4 282 aa7.38□□□□□ -1.23
LINC00649-220ENST00000628906 TMEFF1Q8IYR6 380 aa7.38□□□□□ -1.23
LINC00649-220ENST00000628906 ANKRD44Q8N8A2 993 aa7.38□□□□□ -1.23
LINC00649-220ENST00000628906 ATRIPQ8WXE1 791 aa7.38□□□□□ -1.23
LINC00649-220ENST00000628906 NELL1Q92832 810 aa7.38□□□□□ -1.23
LINC00649-220ENST00000628906 CDCA3Q99618 268 aaPredicted RBP7.38□□□□□ -1.23
LINC00649-220ENST00000628906 BICC1Q9H694 974 aaKnown RBP7.38□□□□□ -1.23
LINC00649-220ENST00000628906 RTN4Q9NQC3 1192 aaKnown RBP7.38□□□□□ -1.23
LINC00649-220ENST00000628906 WNT16Q9UBV4 365 aa7.38□□□□□ -1.23
LINC00649-220ENST00000628906 FBXO4Q9UKT5 387 aa7.38□□□□□ -1.23
LINC00649-220ENST00000628906 PPP1R9AQ9ULJ8 1098 aa7.38□□□□□ -1.23
LINC00649-220ENST00000628906 TMX2Q9Y320 296 aa7.38□□□□□ -1.23
LINC00649-220ENST00000628906 PARP14Q460N5 1801 aa7.38□□□□□ -1.23
LINC00649-220ENST00000628906 EMSYQ7Z589 1322 aa7.37□□□□□ -1.23
LINC00649-220ENST00000628906 KRBA1A5PL33 1030 aa7.37□□□□□ -1.23
LINC00649-220ENST00000628906 POTEMA6NI47 508 aa7.37□□□□□ -1.23
LINC00649-220ENST00000628906 ASB14A6NK59 587 aa7.37□□□□□ -1.23
LINC00649-220ENST00000628906 EIF4E1BA6NMX2 242 aaKnown RBP7.37□□□□□ -1.23
LINC00649-220ENST00000628906 STK25O00506 426 aa7.37□□□□□ -1.23
LINC00649-220ENST00000628906 PER2O15055 1255 aa7.37□□□□□ -1.23
LINC00649-220ENST00000628906 GDF9O60383 454 aa7.37□□□□□ -1.23
LINC00649-220ENST00000628906 CSPG5O95196 566 aa7.37□□□□□ -1.23
LINC00649-220ENST00000628906 ITGB1P05556 798 aa7.37□□□□□ -1.23
LINC00649-220ENST00000628906 SHMT1P34896 483 aa7.37□□□□□ -1.23
LINC00649-220ENST00000628906 CNTN2Q02246 1040 aa7.37□□□□□ -1.23
LINC00649-220ENST00000628906 SPEM2Q0P670 501 aa7.37□□□□□ -1.23
LINC00649-220ENST00000628906 C19orf57Q0VDD7 668 aa7.37□□□□□ -1.23
LINC00649-220ENST00000628906 TDGQ13569 410 aa7.37□□□□□ -1.23
LINC00649-220ENST00000628906 TRIM71Q2Q1W2 868 aaKnown RBP7.37□□□□□ -1.23
LINC00649-220ENST00000628906 SNRNP48Q6IEG0 339 aaKnown RBP7.37□□□□□ -1.23
LINC00649-220ENST00000628906 GDF6Q6KF10 455 aaPredicted RBP7.37□□□□□ -1.23
LINC00649-220ENST00000628906 POTEGQ6S5H5 508 aa7.37□□□□□ -1.23
LINC00649-220ENST00000628906 SPICE1Q8N0Z3 855 aa7.37□□□□□ -1.23
LINC00649-220ENST00000628906 ANKRD35Q8N283 1001 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms