RNA–Protein interactions for RNA: ENST00000628857.1

CNOT1-223, Transcript of CCR4-NOT transcription complex subunit 1, human

TSL 5 BASIC

Gene CNOT1, Length 291 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CNOT1-223	ENST00000628857	BCL6	P41182	706 aa		4.64	□□□□□ -1.67
CNOT1-223	ENST00000628857	GABRE	P78334	506 aa		4.64	□□□□□ -1.67
CNOT1-223	ENST00000628857	NTRK3	Q16288	839 aa		4.64	□□□□□ -1.67
CNOT1-223	ENST00000628857	KCNA10	Q16322	511 aa		4.64	□□□□□ -1.67
CNOT1-223	ENST00000628857	PRSS53	Q2L4Q9	553 aa		4.64	□□□□□ -1.67
CNOT1-223	ENST00000628857	KIZ	Q2M2Z5	673 aa		4.64	□□□□□ -1.67
CNOT1-223	ENST00000628857	ZNF385B	Q569K4	471 aa		4.64	□□□□□ -1.67
CNOT1-223	ENST00000628857	EMC4	Q5J8M3	183 aa		4.64	□□□□□ -1.67
CNOT1-223	ENST00000628857	LBX2	Q6XYB7	198 aa		4.64	□□□□□ -1.67
CNOT1-223	ENST00000628857	TMC6	Q7Z403	805 aa		4.64	□□□□□ -1.67
CNOT1-223	ENST00000628857	IFNL3	Q8IZI9	196 aa		4.64	□□□□□ -1.67
CNOT1-223	ENST00000628857	ZSWIM2	Q8NEG5	633 aa		4.64	□□□□□ -1.67
CNOT1-223	ENST00000628857	DNAJC2	Q99543	621 aa	Known RBP	4.64	□□□□□ -1.67
CNOT1-223	ENST00000628857	DNAJC7	Q99615	494 aa		4.64	□□□□□ -1.67
CNOT1-223	ENST00000628857	CDC6	Q99741	560 aa		4.64	□□□□□ -1.67
CNOT1-223	ENST00000628857	NGRN	Q9NPE2	291 aa	Known RBP	4.64	□□□□□ -1.67
CNOT1-223	ENST00000628857	DBR1	Q9UK59	544 aa	Known RBP	4.64	□□□□□ -1.67
CNOT1-223	ENST00000628857	ZNF652	Q9Y2D9	606 aa		4.64	□□□□□ -1.67
CNOT1-223	ENST00000628857	COA3	Q9Y2R0	106 aa	Predicted RBP	4.64	□□□□□ -1.67
CNOT1-223	ENST00000628857	PCDHA2	Q9Y5H9	948 aa		4.64	□□□□□ -1.67
CNOT1-223	ENST00000628857	ZC3H12D	A2A288	527 aa	Known RBP	4.63	□□□□□ -1.67
CNOT1-223	ENST00000628857	RFXAP	O00287	272 aa		4.63	□□□□□ -1.67
CNOT1-223	ENST00000628857	DIAPH1	O60610	1272 aa	Known RBP	4.63	□□□□□ -1.67
CNOT1-223	ENST00000628857	EFCAB14	O75071	495 aa		4.63	□□□□□ -1.67
CNOT1-223	ENST00000628857	TADA3	O75528	432 aa		4.63	□□□□□ -1.67
CNOT1-223	ENST00000628857	DGKI	O75912	1065 aa		4.63	□□□□□ -1.67
CNOT1-223	ENST00000628857	NTRK1	P04629	796 aa		4.63	□□□□□ -1.67
CNOT1-223	ENST00000628857	FAM153B	P0C7A2	387 aa		4.63	□□□□□ -1.67
CNOT1-223	ENST00000628857	SDHB	P21912	280 aa		4.63	□□□□□ -1.67
CNOT1-223	ENST00000628857	TACR1	P25103	407 aa		4.63	□□□□□ -1.67
CNOT1-223	ENST00000628857	CDR1	P51861	262 aa		4.63	□□□□□ -1.67
CNOT1-223	ENST00000628857	C2orf27A	Q580R0	203 aa		4.63	□□□□□ -1.67
CNOT1-223	ENST00000628857	USP53	Q70EK8	1073 aa		4.63	□□□□□ -1.67
CNOT1-223	ENST00000628857	NLRP10	Q86W26	655 aa		4.63	□□□□□ -1.67
CNOT1-223	ENST00000628857	IGDCC3	Q8IVU1	814 aa		4.63	□□□□□ -1.67
CNOT1-223	ENST00000628857	TMEM151B	Q8IW70	566 aa		4.63	□□□□□ -1.67
CNOT1-223	ENST00000628857	TEX2	Q8IWB9	1127 aa		4.63	□□□□□ -1.67
CNOT1-223	ENST00000628857	NLGN1	Q8N2Q7	840 aa		4.63	□□□□□ -1.67
CNOT1-223	ENST00000628857	ZSCAN18	Q8TBC5	510 aa	Predicted RBP	4.63	□□□□□ -1.67
CNOT1-223	ENST00000628857	PMFBP1	Q8TBY8	1022 aa		4.63	□□□□□ -1.67
CNOT1-223	ENST00000628857	PHOSPHO1	Q8TCT1	267 aa		4.63	□□□□□ -1.67
CNOT1-223	ENST00000628857	MRFAP1L1	Q96HT8	127 aa		4.63	□□□□□ -1.67
CNOT1-223	ENST00000628857	PHF20	Q9BVI0	1012 aa		4.63	□□□□□ -1.67
CNOT1-223	ENST00000628857	EPB41L1	Q9H4G0	881 aa		4.63	□□□□□ -1.67
CNOT1-223	ENST00000628857	HSPBP1	Q9NZL4	362 aa		4.63	□□□□□ -1.67
CNOT1-223	ENST00000628857	FBLN5	Q9UBX5	448 aa		4.63	□□□□□ -1.67
CNOT1-223	ENST00000628857	NUB1	Q9Y5A7	615 aa		4.63	□□□□□ -1.67
CNOT1-223	ENST00000628857	IRAK3	Q9Y616	596 aa		4.63	□□□□□ -1.67
CNOT1-223	ENST00000628857	CCDC85C	A6NKD9	419 aa		4.62	□□□□□ -1.67
CNOT1-223	ENST00000628857	HGS	O14964	777 aa	Predicted RBP	4.62	□□□□□ -1.67
CNOT1-223	ENST00000628857	SGSM2	O43147	1006 aa		4.62	□□□□□ -1.67
CNOT1-223	ENST00000628857	LCP1	P13796	627 aa		4.62	□□□□□ -1.67
CNOT1-223	ENST00000628857	LINC00310	P59036	64 aa		4.62	□□□□□ -1.67
CNOT1-223	ENST00000628857	ZNF124	Q15973	351 aa		4.62	□□□□□ -1.67
CNOT1-223	ENST00000628857	TRIM61	Q5EBN2	209 aa		4.62	□□□□□ -1.67
CNOT1-223	ENST00000628857	YOD1	Q5VVQ6	348 aa	Predicted RBP	4.62	□□□□□ -1.67
CNOT1-223	ENST00000628857	MIB1	Q86YT6	1006 aa		4.62	□□□□□ -1.67
CNOT1-223	ENST00000628857	SYNPO	Q8N3V7	929 aa		4.62	□□□□□ -1.67
CNOT1-223	ENST00000628857	EXOC2	Q96KP1	924 aa		4.62	□□□□□ -1.67
CNOT1-223	ENST00000628857	LNPK	Q9C0E8	428 aa		4.62	□□□□□ -1.67
CNOT1-223	ENST00000628857	SMOC1	Q9H4F8	434 aa		4.62	□□□□□ -1.67
CNOT1-223	ENST00000628857	KCNK12	Q9HB15	430 aa		4.62	□□□□□ -1.67
CNOT1-223	ENST00000628857	SLC6A20	Q9NP91	592 aa		4.62	□□□□□ -1.67
CNOT1-223	ENST00000628857	PFDN2	Q9UHV9	154 aa		4.62	□□□□□ -1.67
CNOT1-223	ENST00000628857	CNOT6	Q9ULM6	557 aa	Known RBP	4.62	□□□□□ -1.67
CNOT1-223	ENST00000628857	KRIT1	O00522	736 aa		4.61	□□□□□ -1.67
CNOT1-223	ENST00000628857	BUB1B	O60566	1050 aa	Predicted RBP	4.61	□□□□□ -1.67
CNOT1-223	ENST00000628857	ASGR2	P07307	311 aa		4.61	□□□□□ -1.67
CNOT1-223	ENST00000628857	C6orf222	P0C671	652 aa	Predicted RBP	4.61	□□□□□ -1.67
CNOT1-223	ENST00000628857	CACNB2	Q08289	660 aa	Predicted RBP	4.61	□□□□□ -1.67
CNOT1-223	ENST00000628857	CCDC144B	Q3MJ40	725 aa		4.61	□□□□□ -1.67
CNOT1-223	ENST00000628857	HABP4	Q5JVS0	413 aa	Known RBP	4.61	□□□□□ -1.67
CNOT1-223	ENST00000628857	FAM209A	Q5JX71	171 aa		4.61	□□□□□ -1.67
CNOT1-223	ENST00000628857	FOXB2	Q5VYV0	432 aa		4.61	□□□□□ -1.67
CNOT1-223	ENST00000628857	B3GNT8	Q7Z7M8	397 aa		4.61	□□□□□ -1.67
CNOT1-223	ENST00000628857	C1QL4	Q86Z23	238 aa		4.61	□□□□□ -1.67
CNOT1-223	ENST00000628857	TRIM48	Q8IWZ4	208 aa		4.61	□□□□□ -1.67
CNOT1-223	ENST00000628857	PPIL4	Q8WUA2	492 aa	Known RBP eCLIP	4.61	□□□□□ -1.67
CNOT1-223	ENST00000628857	ALG3	Q92685	438 aa		4.61	□□□□□ -1.67
CNOT1-223	ENST00000628857	SGPP1	Q9BX95	441 aa		4.61	□□□□□ -1.67
CNOT1-223	ENST00000628857	MRPL4	Q9BYD3	311 aa	Known RBP	4.61	□□□□□ -1.67
CNOT1-223	ENST00000628857	CLDND1	Q9NY35	253 aa		4.61	□□□□□ -1.67
CNOT1-223	ENST00000628857	MRPS23	Q9Y3D9	190 aa	Known RBP	4.61	□□□□□ -1.67
CNOT1-223	ENST00000628857	KCTD3	Q9Y597	815 aa		4.61	□□□□□ -1.67
CNOT1-223	ENST00000628857	FAM47E-STBD1	D6RA91	191 aa		4.6	□□□□□ -1.67
CNOT1-223	ENST00000628857	NPIPB6	E9PJ23	425 aa		4.6	□□□□□ -1.67
CNOT1-223	ENST00000628857	GSTA4	O15217	222 aa		4.6	□□□□□ -1.67
CNOT1-223	ENST00000628857	MSC	O60682	206 aa		4.6	□□□□□ -1.67
CNOT1-223	ENST00000628857	NPTXR	O95502	500 aa		4.6	□□□□□ -1.67
CNOT1-223	ENST00000628857	APP	P05067	770 aa		4.6	□□□□□ -1.67
CNOT1-223	ENST00000628857	FPR2	P25090	351 aa		4.6	□□□□□ -1.67
CNOT1-223	ENST00000628857	CFP	P27918	469 aa		4.6	□□□□□ -1.67
CNOT1-223	ENST00000628857	JAG1	P78504	1218 aa		4.6	□□□□□ -1.67
CNOT1-223	ENST00000628857	ZNF200	P98182	395 aa	Predicted RBP	4.6	□□□□□ -1.67
CNOT1-223	ENST00000628857	SPIRE1	Q08AE8	756 aa		4.6	□□□□□ -1.67
CNOT1-223	ENST00000628857	STEAP3	Q658P3	488 aa		4.6	□□□□□ -1.67
CNOT1-223	ENST00000628857	CIAPIN1	Q6FI81	312 aa		4.6	□□□□□ -1.67
CNOT1-223	ENST00000628857	KCNT2	Q6UVM3	1135 aa		4.6	□□□□□ -1.67
CNOT1-223	ENST00000628857	OTOP3	Q7RTS5	596 aa		4.6	□□□□□ -1.67
CNOT1-223	ENST00000628857	FAM129C	Q86XR2	697 aa		4.6	□□□□□ -1.67

Retrieved 100 of 20,778 RNA–protein pairs in 23 ms