RNA–Protein interactions for RNA: ENST00000626948.2

SOX2-OT-241, SOX2 overlapping transcript, humanhuman

TSL 5

Gene SOX2-OT, Length 836 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-241ENST00000626948 HOXA13P31271 388 aaPredicted RBP15.76■□□□□ 0.11
SOX2-OT-241ENST00000626948 RABGGTBP53611 331 aa15.76■□□□□ 0.11
SOX2-OT-241ENST00000626948 MB21D2Q8IYB1 491 aaPredicted RBP15.76■□□□□ 0.11
SOX2-OT-241ENST00000626948 IGDCC4Q8TDY8 1250 aa15.76■□□□□ 0.11
SOX2-OT-241ENST00000626948 GPKOWQ92917 476 aaPredicted RBP eCLIP15.76■□□□□ 0.117e-17■■■■■ 29.7
SOX2-OT-241ENST00000626948 MAP4K1Q92918 833 aa15.76■□□□□ 0.11
SOX2-OT-241ENST00000626948 PIGSQ96S52 555 aa15.76■□□□□ 0.11
SOX2-OT-241ENST00000626948 AMNQ9BXJ7 453 aa15.76■□□□□ 0.11
SOX2-OT-241ENST00000626948 BCAS3Q9H6U6 928 aa15.76■□□□□ 0.11
SOX2-OT-241ENST00000626948 PRDM6Q9NQX0 595 aa15.76■□□□□ 0.11
SOX2-OT-241ENST00000626948 MRPL11Q9Y3B7 192 aaKnown RBP15.76■□□□□ 0.11
SOX2-OT-241ENST00000626948 SP2Q02086 613 aa15.75■□□□□ 0.11
SOX2-OT-241ENST00000626948 HIC1Q14526 733 aa15.75■□□□□ 0.11
SOX2-OT-241ENST00000626948 STXBP2Q15833 593 aa15.75■□□□□ 0.11
SOX2-OT-241ENST00000626948 GDF6Q6KF10 455 aaPredicted RBP15.75■□□□□ 0.11
SOX2-OT-241ENST00000626948 NFRKBQ6P4R8 1299 aa15.75■□□□□ 0.11
SOX2-OT-241ENST00000626948 DHX38Q92620 1227 aaKnown RBP15.75■□□□□ 0.11
SOX2-OT-241ENST00000626948 IWS1Q96ST2 819 aa15.75■□□□□ 0.11
SOX2-OT-241ENST00000626948 PDCD2LQ9BRP1 358 aa15.75■□□□□ 0.11
SOX2-OT-241ENST00000626948 NKX2-4Q9H2Z4 354 aa15.75■□□□□ 0.11
SOX2-OT-241ENST00000626948 PRDM12Q9H4Q4 367 aa15.75■□□□□ 0.11
SOX2-OT-241ENST00000626948 IFIT3O14879 490 aaKnown RBP15.74■□□□□ 0.11
SOX2-OT-241ENST00000626948 ARHGEF15O94989 841 aa15.74■□□□□ 0.11
SOX2-OT-241ENST00000626948 GH1P01241 217 aa15.74■□□□□ 0.11
SOX2-OT-241ENST00000626948 TCTN1Q2MV58 587 aa15.74■□□□□ 0.11
SOX2-OT-241ENST00000626948 FAM47CQ5HY64 1035 aa15.74■□□□□ 0.11
SOX2-OT-241ENST00000626948 ARHGEF16Q5VV41 709 aa15.74■□□□□ 0.11
SOX2-OT-241ENST00000626948 DEFB128Q7Z7B8 93 aa15.74■□□□□ 0.11
SOX2-OT-241ENST00000626948 HOMER1Q86YM7 354 aa15.74■□□□□ 0.11
SOX2-OT-241ENST00000626948 MCF2L2Q86YR7 1114 aa15.74■□□□□ 0.11
SOX2-OT-241ENST00000626948 PCDHA1Q9Y5I3 950 aa15.74■□□□□ 0.11
SOX2-OT-241ENST00000626948 U3KPZ7 1027 aaPredicted RBP15.74■□□□□ 0.11
SOX2-OT-241ENST00000626948 IQCF3P0C7M6 154 aa15.73■□□□□ 0.11
SOX2-OT-241ENST00000626948 SUPT20HL2P0C7V6 817 aa15.73■□□□□ 0.11
SOX2-OT-241ENST00000626948 PGM5Q15124 567 aa15.73■□□□□ 0.11
SOX2-OT-241ENST00000626948 VSIG10LQ86VR7 867 aa15.73■□□□□ 0.11
SOX2-OT-241ENST00000626948 WNT8BQ93098 351 aa15.73■□□□□ 0.11
SOX2-OT-241ENST00000626948 EMID1Q96A84 441 aaPredicted RBP15.73■□□□□ 0.11
SOX2-OT-241ENST00000626948 MYL10Q9BUA6 226 aa15.73■□□□□ 0.11
SOX2-OT-241ENST00000626948 LSG1Q9H089 658 aaKnown RBP15.73■□□□□ 0.11
SOX2-OT-241ENST00000626948 TELO2Q9Y4R8 837 aa15.73■□□□□ 0.11
SOX2-OT-241ENST00000626948 RBM8AQ9Y5S9 174 aaKnown RBP15.73■□□□□ 0.11
SOX2-OT-241ENST00000626948 DOCK5Q9H7D0 1870 aa15.73■□□□□ 0.11
SOX2-OT-241ENST00000626948 HAS3O00219 553 aa15.72■□□□□ 0.11
SOX2-OT-241ENST00000626948 SORBS3O60504 671 aa15.72■□□□□ 0.11
SOX2-OT-241ENST00000626948 KPNA6O60684 536 aa15.72■□□□□ 0.11
SOX2-OT-241ENST00000626948 EIF3JO75822 258 aaKnown RBP15.72■□□□□ 0.11
SOX2-OT-241ENST00000626948 HOXD8P13378 290 aaPredicted RBP15.72■□□□□ 0.11
SOX2-OT-241ENST00000626948 PTPN11Q06124 597 aaPredicted RBP15.72■□□□□ 0.11
SOX2-OT-241ENST00000626948 TRAF7Q6Q0C0 670 aa15.72■□□□□ 0.11
SOX2-OT-241ENST00000626948 SESTD1Q86VW0 696 aa15.72■□□□□ 0.11
SOX2-OT-241ENST00000626948 NCOA7Q8NI08 942 aa15.72■□□□□ 0.11
SOX2-OT-241ENST00000626948 MPHOSPH6Q99547 160 aaKnown RBP15.72■□□□□ 0.11
SOX2-OT-241ENST00000626948 LY9Q9HBG7 655 aa15.72■□□□□ 0.11
SOX2-OT-241ENST00000626948 B4DLN1 442 aa15.71■□□□□ 0.11
SOX2-OT-241ENST00000626948 PITPNM1O00562 1244 aa15.71■□□□□ 0.11
SOX2-OT-241ENST00000626948 ZNF286BP0CG31 522 aa15.71■□□□□ 0.11
SOX2-OT-241ENST00000626948 MYCLP12524 364 aaPredicted RBP15.71■□□□□ 0.11
SOX2-OT-241ENST00000626948 MRPL12P52815 198 aaKnown RBP15.71■□□□□ 0.11
SOX2-OT-241ENST00000626948 CHMP4BP1P59074 171 aa15.71■□□□□ 0.11
SOX2-OT-241ENST00000626948 MRPS9P82933 396 aaKnown RBP15.71■□□□□ 0.11
SOX2-OT-241ENST00000626948 ZNF200P98182 395 aaPredicted RBP15.71■□□□□ 0.11
SOX2-OT-241ENST00000626948 SEMA3FQ13275 785 aa15.71■□□□□ 0.11
SOX2-OT-241ENST00000626948 WTAPQ15007 396 aa15.71■□□□□ 0.11
SOX2-OT-241ENST00000626948 PTGISQ16647 500 aa15.71■□□□□ 0.11
SOX2-OT-241ENST00000626948 HSDL1Q3SXM5 330 aa15.71■□□□□ 0.11
SOX2-OT-241ENST00000626948 MYSM1Q5VVJ2 828 aa15.71■□□□□ 0.11
SOX2-OT-241ENST00000626948 SPRED2Q7Z698 418 aa15.71■□□□□ 0.11
SOX2-OT-241ENST00000626948 RUFY2Q8WXA3 655 aa15.71■□□□□ 0.11
SOX2-OT-241ENST00000626948 HDAC6Q9UBN7 1215 aa15.71■□□□□ 0.11
SOX2-OT-241ENST00000626948 SLC4A7Q9Y6M7 1214 aa15.71■□□□□ 0.11
SOX2-OT-241ENST00000626948 PNMA6FA0A0J9YX94 578 aa15.7■□□□□ 0.1
SOX2-OT-241ENST00000626948 F2P00734 622 aa15.7■□□□□ 0.1
SOX2-OT-241ENST00000626948 TRDNQ13061 729 aa15.7■□□□□ 0.1
SOX2-OT-241ENST00000626948 TRIM71Q2Q1W2 868 aaKnown RBP15.7■□□□□ 0.1
SOX2-OT-241ENST00000626948 BRDTQ58F21 947 aaPredicted RBP15.7■□□□□ 0.1
SOX2-OT-241ENST00000626948 TMEM67Q5HYA8 995 aa15.7■□□□□ 0.1
SOX2-OT-241ENST00000626948 RPUSD2Q8IZ73 545 aaKnown RBP15.7■□□□□ 0.1
SOX2-OT-241ENST00000626948 PIBF1Q8WXW3 757 aa15.7■□□□□ 0.1
SOX2-OT-241ENST00000626948 MAP3K20Q9NYL2 800 aaKnown RBP15.7■□□□□ 0.1
SOX2-OT-241ENST00000626948 GTF2IRD1Q9UHL9 959 aa15.7■□□□□ 0.1
SOX2-OT-241ENST00000626948 MRVI1Q9Y6F6 885 aa15.7■□□□□ 0.1
SOX2-OT-241ENST00000626948 TTC28Q96AY4 2481 aa15.7■□□□□ 0.1
SOX2-OT-241ENST00000626948 FRMPD4Q14CM0 1322 aa15.69■□□□□ 0.1
SOX2-OT-241ENST00000626948 EPOPA6NHQ4 379 aa15.69■□□□□ 0.1
SOX2-OT-241ENST00000626948 ZBBXA8MT70 800 aa15.69■□□□□ 0.1
SOX2-OT-241ENST00000626948 PLEKHA8P1O95397 391 aa15.69■□□□□ 0.1
SOX2-OT-241ENST00000626948 ATP2A2P16615 1042 aaKnown RBP15.69■□□□□ 0.1
SOX2-OT-241ENST00000626948 UBA1P22314 1058 aaKnown RBP15.69■□□□□ 0.1
SOX2-OT-241ENST00000626948 PSEN2P49810 448 aa15.69■□□□□ 0.1
SOX2-OT-241ENST00000626948 RBL2Q08999 1139 aa15.69■□□□□ 0.1
SOX2-OT-241ENST00000626948 MBTPS1Q14703 1052 aa15.69■□□□□ 0.1
SOX2-OT-241ENST00000626948 RAB30Q15771 203 aa15.69■□□□□ 0.1
SOX2-OT-241ENST00000626948 CELF3Q5SZQ8 465 aaKnown RBP15.69■□□□□ 0.1
SOX2-OT-241ENST00000626948 TMCO2Q7Z6W1 182 aaPredicted RBP15.69■□□□□ 0.1
SOX2-OT-241ENST00000626948 RALYLQ86SE5 291 aaKnown RBP15.69■□□□□ 0.1
SOX2-OT-241ENST00000626948 FCHSD1Q86WN1 690 aa15.69■□□□□ 0.1
SOX2-OT-241ENST00000626948 PPTC7Q8NI37 304 aa15.69■□□□□ 0.1
SOX2-OT-241ENST00000626948 C16orf70Q9BSU1 422 aa15.69■□□□□ 0.1
SOX2-OT-241ENST00000626948 MSRAQ9UJ68 235 aa15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms