RNA–Protein interactions for RNA: ENST00000625617.2

TUBB3-215, Transcript of tubulin beta 3 class III, humanhuman

TSL 4 BASIC

Gene TUBB3, Length 570 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-215ENST00000625617 KIF28PB7ZC32 967 aa16.87■□□□□ 0.29
TUBB3-215ENST00000625617 CASTP20810 708 aaKnown RBP16.87■□□□□ 0.29
TUBB3-215ENST00000625617 KCNJ6P48051 423 aa16.87■□□□□ 0.29
TUBB3-215ENST00000625617 SKIV2LQ15477 1246 aaKnown RBP16.87■□□□□ 0.29
TUBB3-215ENST00000625617 DGKDQ16760 1214 aa16.87■□□□□ 0.29
TUBB3-215ENST00000625617 IFIT1BQ5T764 474 aaKnown RBP16.87■□□□□ 0.29
TUBB3-215ENST00000625617 GDF6Q6KF10 455 aaPredicted RBP16.87■□□□□ 0.29
TUBB3-215ENST00000625617 HERC6Q8IVU3 1022 aa16.87■□□□□ 0.29
TUBB3-215ENST00000625617 JMJD4Q9H9V9 463 aa16.87■□□□□ 0.29
TUBB3-215ENST00000625617 VAT1LQ9HCJ6 419 aa16.87■□□□□ 0.29
TUBB3-215ENST00000625617 ZSWIM5Q9P217 1185 aa16.87■□□□□ 0.29
TUBB3-215ENST00000625617 MRVI1Q9Y6F6 885 aa16.87■□□□□ 0.29
TUBB3-215ENST00000625617 CFBP00751 764 aa16.86■□□□□ 0.29
TUBB3-215ENST00000625617 SELPP16109 830 aa16.86■□□□□ 0.29
TUBB3-215ENST00000625617 LRRC8DQ7L1W4 858 aa16.86■□□□□ 0.29
TUBB3-215ENST00000625617 KAT2BQ92831 832 aa16.86■□□□□ 0.29
TUBB3-215ENST00000625617 EMID1Q96A84 441 aaPredicted RBP16.86■□□□□ 0.29
TUBB3-215ENST00000625617 CTAGE1Q96RT6 745 aa16.86■□□□□ 0.29
TUBB3-215ENST00000625617 KATNAL1Q9BW62 490 aa16.86■□□□□ 0.29
TUBB3-215ENST00000625617 AMNQ9BXJ7 453 aa16.86■□□□□ 0.29
TUBB3-215ENST00000625617 CERS4Q9HA82 394 aa16.86■□□□□ 0.29
TUBB3-215ENST00000625617 PXMP2Q9NR77 195 aa16.86■□□□□ 0.29
TUBB3-215ENST00000625617 GBF1Q92538 1859 aa16.85■□□□□ 0.29
TUBB3-215ENST00000625617 EIF3JO75822 258 aaKnown RBP16.85■□□□□ 0.29
TUBB3-215ENST00000625617 IGHDP01880 384 aa16.85■□□□□ 0.29
TUBB3-215ENST00000625617 NR3C2P08235 984 aa16.85■□□□□ 0.29
TUBB3-215ENST00000625617 TAP1Q03518 808 aa16.85■□□□□ 0.29
TUBB3-215ENST00000625617 RBL2Q08999 1139 aa16.85■□□□□ 0.29
TUBB3-215ENST00000625617 C7orf31Q8N865 590 aa16.85■□□□□ 0.29
TUBB3-215ENST00000625617 PPTC7Q8NI37 304 aa16.85■□□□□ 0.29
TUBB3-215ENST00000625617 ARNTL2Q8WYA1 636 aa16.85■□□□□ 0.29
TUBB3-215ENST00000625617 GTF2IRD1Q9UHL9 959 aa16.85■□□□□ 0.29
TUBB3-215ENST00000625617 DDX41Q9UJV9 622 aaKnown RBP16.85■□□□□ 0.29
TUBB3-215ENST00000625617 CHD7Q9P2D1 2997 aa16.85■□□□□ 0.29
TUBB3-215ENST00000625617 EPOPA6NHQ4 379 aa16.84■□□□□ 0.29
TUBB3-215ENST00000625617 RFXAPO00287 272 aa16.84■□□□□ 0.29
TUBB3-215ENST00000625617 TLL1O43897 1013 aa16.84■□□□□ 0.29
TUBB3-215ENST00000625617 ARHGEF15O94989 841 aa16.84■□□□□ 0.29
TUBB3-215ENST00000625617 PARNO95453 639 aaKnown RBP16.84■□□□□ 0.29
TUBB3-215ENST00000625617 F2P00734 622 aa16.84■□□□□ 0.29
TUBB3-215ENST00000625617 ZNF286BP0CG31 522 aa16.84■□□□□ 0.29
TUBB3-215ENST00000625617 PSEN2P49810 448 aa16.84■□□□□ 0.29
TUBB3-215ENST00000625617 HSD17B4P51659 736 aa16.84■□□□□ 0.29
TUBB3-215ENST00000625617 WDR5P61964 334 aaKnown RBP16.84■□□□□ 0.29
TUBB3-215ENST00000625617 LAMC2Q13753 1193 aa16.84■□□□□ 0.29
TUBB3-215ENST00000625617 AAK1Q2M2I8 961 aa16.84■□□□□ 0.29
TUBB3-215ENST00000625617 STAG2Q8N3U4 1231 aa16.84■□□□□ 0.29
TUBB3-215ENST00000625617 DHX38Q92620 1227 aaKnown RBP16.84■□□□□ 0.29
TUBB3-215ENST00000625617 MTCH2Q9Y6C9 303 aa16.84■□□□□ 0.29
TUBB3-215ENST00000625617 KLRF2D3W0D1 207 aa16.83■□□□□ 0.28
TUBB3-215ENST00000625617 OPLAHO14841 1288 aa16.83■□□□□ 0.28
TUBB3-215ENST00000625617 POU3F3P20264 500 aaPredicted RBP16.83■□□□□ 0.28
TUBB3-215ENST00000625617 GHRHRQ02643 423 aa16.83■□□□□ 0.28
TUBB3-215ENST00000625617 TFF2Q03403 129 aa16.83■□□□□ 0.28
TUBB3-215ENST00000625617 MFSD10Q14728 455 aa16.83■□□□□ 0.28
TUBB3-215ENST00000625617 CNKSR3Q6P9H4 555 aa16.83■□□□□ 0.28
TUBB3-215ENST00000625617 PDCD2LQ9BRP1 358 aa16.83■□□□□ 0.28
TUBB3-215ENST00000625617 ALG1Q9BT22 464 aa16.83■□□□□ 0.28
TUBB3-215ENST00000625617 HDAC6Q9UBN7 1215 aa16.83■□□□□ 0.28
TUBB3-215ENST00000625617 MUC3AQ02505 3323 aa16.83■□□□□ 0.28
TUBB3-215ENST00000625617 ZBTB5O15062 677 aa16.82■□□□□ 0.28
TUBB3-215ENST00000625617 CKBP12277 381 aa16.82■□□□□ 0.28
TUBB3-215ENST00000625617 MYCLP12524 364 aaPredicted RBP16.82■□□□□ 0.28
TUBB3-215ENST00000625617 SEC23AQ15436 765 aa16.82■□□□□ 0.28
TUBB3-215ENST00000625617 KIAA0753Q2KHM9 967 aa16.82■□□□□ 0.28
TUBB3-215ENST00000625617 DHX37Q8IY37 1157 aaKnown RBP16.82■□□□□ 0.28
TUBB3-215ENST00000625617 MTMR8Q96EF0 704 aa16.82■□□□□ 0.28
TUBB3-215ENST00000625617 IL25Q9H293 177 aa16.82■□□□□ 0.28
TUBB3-215ENST00000625617 PCDHA1Q9Y5I3 950 aa16.82■□□□□ 0.28
TUBB3-215ENST00000625617 MYO9BQ13459 2157 aa16.82■□□□□ 0.28
TUBB3-215ENST00000625617 SCN5AQ14524 2016 aa16.82■□□□□ 0.28
TUBB3-215ENST00000625617 HAS3O00219 553 aa16.81■□□□□ 0.28
TUBB3-215ENST00000625617 PPP1R11O60927 126 aaPredicted RBP16.81■□□□□ 0.28
TUBB3-215ENST00000625617 CXCL10P02778 98 aa16.81■□□□□ 0.28
TUBB3-215ENST00000625617 HOXD8P13378 290 aaPredicted RBP16.81■□□□□ 0.28
TUBB3-215ENST00000625617 DEFB103AP81534 67 aa16.81■□□□□ 0.28
TUBB3-215ENST00000625617 TRDNQ13061 729 aa16.81■□□□□ 0.28
TUBB3-215ENST00000625617 PTK7Q13308 1070 aa16.81■□□□□ 0.28
TUBB3-215ENST00000625617 GPNMBQ14956 572 aa16.81■□□□□ 0.28
TUBB3-215ENST00000625617 KRT40Q6A162 431 aa16.81■□□□□ 0.28
TUBB3-215ENST00000625617 KCNV1Q6PIU1 500 aa16.81■□□□□ 0.28
TUBB3-215ENST00000625617 CYB5R4Q7L1T6 521 aa16.81■□□□□ 0.28
TUBB3-215ENST00000625617 HOMER1Q86YM7 354 aa16.81■□□□□ 0.28
TUBB3-215ENST00000625617 EXOC6Q8TAG9 804 aa16.81■□□□□ 0.28
TUBB3-215ENST00000625617 SPATA33Q96N06 139 aa16.81■□□□□ 0.28
TUBB3-215ENST00000625617 ZBED2Q9BTP6 218 aa16.81■□□□□ 0.28
TUBB3-215ENST00000625617 MAP3K20Q9NYL2 800 aaKnown RBP16.81■□□□□ 0.28
TUBB3-215ENST00000625617 MAD2L2Q9UI95 211 aa16.81■□□□□ 0.28
TUBB3-215ENST00000625617 LCHNA4D1U4 455 aa16.8■□□□□ 0.28
TUBB3-215ENST00000625617 NBNO60934 754 aa16.8■□□□□ 0.28
TUBB3-215ENST00000625617 EFCAB14O75071 495 aa16.8■□□□□ 0.28
TUBB3-215ENST00000625617 GGPS1O95749 300 aa16.8■□□□□ 0.28
TUBB3-215ENST00000625617 COL9A1P20849 921 aa16.8■□□□□ 0.28
TUBB3-215ENST00000625617 HOXA13P31271 388 aaPredicted RBP16.8■□□□□ 0.28
TUBB3-215ENST00000625617 KCNQ1P51787 676 aa16.8■□□□□ 0.28
TUBB3-215ENST00000625617 TRAF1Q13077 416 aa16.8■□□□□ 0.28
TUBB3-215ENST00000625617 GRB10Q13322 594 aa16.8■□□□□ 0.28
TUBB3-215ENST00000625617 PGM5Q15124 567 aa16.8■□□□□ 0.28
TUBB3-215ENST00000625617 STOX1Q6ZVD7 989 aa16.8■□□□□ 0.28
TUBB3-215ENST00000625617 TMCO2Q7Z6W1 182 aaPredicted RBP16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms