RNA–Protein interactions for RNA: ENST00000624009.3

LINC00963-217, long intergenic non-protein coding RNA 963, humanhuman

TSL 5 BASIC

Gene LINC00963, Length 663 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-217ENST00000624009 TBX21Q9UL17 535 aa14.35□□□□□ -0.11
LINC00963-217ENST00000624009 TRIP12Q14669 1992 aaPredicted RBP14.34□□□□□ -0.11
LINC00963-217ENST00000624009 TRIM43BA6NCK2 446 aa14.34□□□□□ -0.11
LINC00963-217ENST00000624009 MEIS2O14770 477 aa14.34□□□□□ -0.11
LINC00963-217ENST00000624009 GH1P01241 217 aa14.34□□□□□ -0.11
LINC00963-217ENST00000624009 CD4P01730 458 aa14.34□□□□□ -0.11
LINC00963-217ENST00000624009 CCND2P30279 289 aa14.34□□□□□ -0.11
LINC00963-217ENST00000624009 HOXA13P31271 388 aaPredicted RBP14.34□□□□□ -0.11
LINC00963-217ENST00000624009 FGD1P98174 961 aa14.34□□□□□ -0.11
LINC00963-217ENST00000624009 FUT2Q10981 343 aa14.34□□□□□ -0.11
LINC00963-217ENST00000624009 ITGA7Q13683 1181 aa14.34□□□□□ -0.11
LINC00963-217ENST00000624009 CXCL17Q6UXB2 119 aa14.34□□□□□ -0.11
LINC00963-217ENST00000624009 OR6J1Q8NGC5 347 aa14.34□□□□□ -0.11
LINC00963-217ENST00000624009 VTI1AQ96AJ9 217 aa14.34□□□□□ -0.11
LINC00963-217ENST00000624009 TRIM43Q96BQ3 446 aaPredicted RBP14.34□□□□□ -0.11
LINC00963-217ENST00000624009 MTG1Q9BT17 334 aaPredicted RBP14.34□□□□□ -0.11
LINC00963-217ENST00000624009 PSTPIP2Q9H939 334 aa14.34□□□□□ -0.11
LINC00963-217ENST00000624009 BRPF3Q9ULD4 1205 aa14.34□□□□□ -0.11
LINC00963-217ENST00000624009 CNTNAP5Q8WYK1 1306 aa14.34□□□□□ -0.11
LINC00963-217ENST00000624009 KLF18A0A0U1RQI7 1052 aa14.33□□□□□ -0.12
LINC00963-217ENST00000624009 RGS20O76081 388 aa14.33□□□□□ -0.12
LINC00963-217ENST00000624009 ARIH2O95376 493 aa14.33□□□□□ -0.12
LINC00963-217ENST00000624009 TIMP1P01033 207 aa14.33□□□□□ -0.12
LINC00963-217ENST00000624009 HOXD8P13378 290 aaPredicted RBP14.33□□□□□ -0.12
LINC00963-217ENST00000624009 RXRAP19793 462 aa14.33□□□□□ -0.12
LINC00963-217ENST00000624009 RPS6KB1P23443 525 aa14.33□□□□□ -0.12
LINC00963-217ENST00000624009 IRX5P78411 483 aaPredicted RBP14.33□□□□□ -0.12
LINC00963-217ENST00000624009 PTPN11Q06124 597 aaPredicted RBP14.33□□□□□ -0.12
LINC00963-217ENST00000624009 LAMC2Q13753 1193 aa14.33□□□□□ -0.12
LINC00963-217ENST00000624009 GNPTABQ3T906 1256 aa14.33□□□□□ -0.12
LINC00963-217ENST00000624009 PCNX4Q63HM2 1172 aa14.33□□□□□ -0.12
LINC00963-217ENST00000624009 NFRKBQ6P4R8 1299 aa14.33□□□□□ -0.12
LINC00963-217ENST00000624009 SEPT14Q6ZU15 432 aa14.33□□□□□ -0.12
LINC00963-217ENST00000624009 INPP4AQ96PE3 977 aaPredicted RBP14.33□□□□□ -0.12
LINC00963-217ENST00000624009 ZSWIM6Q9HCJ5 1215 aa14.33□□□□□ -0.12
LINC00963-217ENST00000624009 TMEM39AQ9NV64 488 aa14.33□□□□□ -0.12
LINC00963-217ENST00000624009 GOLGA8AA7E2F4 631 aa14.32□□□□□ -0.12
LINC00963-217ENST00000624009 GOLGA8BA8MQT2 603 aa14.32□□□□□ -0.12
LINC00963-217ENST00000624009 SUPT20HL2P0C7V6 817 aa14.32□□□□□ -0.12
LINC00963-217ENST00000624009 RAG1P15918 1043 aa14.32□□□□□ -0.12
LINC00963-217ENST00000624009 CASTP20810 708 aaKnown RBP14.32□□□□□ -0.12
LINC00963-217ENST00000624009 ICAM3P32942 547 aa14.32□□□□□ -0.12
LINC00963-217ENST00000624009 MDM2Q00987 491 aaPredicted RBP14.32□□□□□ -0.12
LINC00963-217ENST00000624009 ARHGAP1Q07960 439 aa14.32□□□□□ -0.12
LINC00963-217ENST00000624009 TMEM63BQ5T3F8 832 aa14.32□□□□□ -0.12
LINC00963-217ENST00000624009 Q6ZUG5 572 aa14.32□□□□□ -0.12
LINC00963-217ENST00000624009 RUFY3Q7L099 469 aa14.32□□□□□ -0.12
LINC00963-217ENST00000624009 SH3RF1Q7Z6J0 888 aa14.32□□□□□ -0.12
LINC00963-217ENST00000624009 PPTC7Q8NI37 304 aa14.32□□□□□ -0.12
LINC00963-217ENST00000624009 SMARCC2Q8TAQ2 1214 aa14.32□□□□□ -0.12
LINC00963-217ENST00000624009 TCEANC2Q96MN5 208 aa14.32□□□□□ -0.12
LINC00963-217ENST00000624009 PRDM5Q9NQX1 630 aaPredicted RBP14.32□□□□□ -0.12
LINC00963-217ENST00000624009 MRVI1Q9Y6F6 885 aa14.32□□□□□ -0.12
LINC00963-217ENST00000624009 GRIN2DO15399 1336 aa14.32□□□□□ -0.12
LINC00963-217ENST00000624009 MMP3P08254 477 aa14.31□□□□□ -0.12
LINC00963-217ENST00000624009 METAP2P50579 478 aaKnown RBP eCLIP14.31□□□□□ -0.12
LINC00963-217ENST00000624009 ANAPC15P60006 121 aa14.31□□□□□ -0.12
LINC00963-217ENST00000624009 DGKDQ16760 1214 aa14.31□□□□□ -0.12
LINC00963-217ENST00000624009 MFSD5Q6N075 450 aa14.31□□□□□ -0.12
LINC00963-217ENST00000624009 SESTD1Q86VW0 696 aa14.31□□□□□ -0.12
LINC00963-217ENST00000624009 FCHSD1Q86WN1 690 aa14.31□□□□□ -0.12
LINC00963-217ENST00000624009 BADQ92934 168 aa14.31□□□□□ -0.12
LINC00963-217ENST00000624009 BRF1Q92994 677 aa14.31□□□□□ -0.12
LINC00963-217ENST00000624009 IL17RAQ96F46 866 aa14.31□□□□□ -0.12
LINC00963-217ENST00000624009 SENP7Q9BQF6 1050 aa14.31□□□□□ -0.12
LINC00963-217ENST00000624009 FAM217BQ9NTX9 383 aaPredicted RBP14.31□□□□□ -0.12
LINC00963-217ENST00000624009 DOCK5Q9H7D0 1870 aa14.31□□□□□ -0.12
LINC00963-217ENST00000624009 MAFGO15525 162 aa14.3□□□□□ -0.12
LINC00963-217ENST00000624009 PPFIA4O75335 1185 aa14.3□□□□□ -0.12
LINC00963-217ENST00000624009 FOSP01100 380 aaPredicted RBP14.3□□□□□ -0.12
LINC00963-217ENST00000624009 MYCLP12524 364 aaPredicted RBP14.3□□□□□ -0.12
LINC00963-217ENST00000624009 MRPS9P82933 396 aaKnown RBP14.3□□□□□ -0.12
LINC00963-217ENST00000624009 NEDD9Q14511 834 aa14.3□□□□□ -0.12
LINC00963-217ENST00000624009 LY6KQ17RY6 165 aa14.3□□□□□ -0.12
LINC00963-217ENST00000624009 CELF3Q5SZQ8 465 aaKnown RBP14.3□□□□□ -0.12
LINC00963-217ENST00000624009 MYSM1Q5VVJ2 828 aa14.3□□□□□ -0.12
LINC00963-217ENST00000624009 USP17L6PQ6QN14 398 aa14.3□□□□□ -0.12
LINC00963-217ENST00000624009 FAM177A1Q8N128 213 aaPredicted RBP14.3□□□□□ -0.12
LINC00963-217ENST00000624009 CMTR1Q8N1G2 835 aaKnown RBP14.3□□□□□ -0.12
LINC00963-217ENST00000624009 IL31RAQ8NI17 732 aa14.3□□□□□ -0.12
LINC00963-217ENST00000624009 PIBF1Q8WXW3 757 aa14.3□□□□□ -0.12
LINC00963-217ENST00000624009 COPS5Q92905 334 aa14.3□□□□□ -0.12
LINC00963-217ENST00000624009 CDHR1Q96JP9 859 aa14.3□□□□□ -0.12
LINC00963-217ENST00000624009 KATNAL1Q9BW62 490 aa14.3□□□□□ -0.12
LINC00963-217ENST00000624009 ALDH8A1Q9H2A2 487 aaPredicted RBP14.3□□□□□ -0.12
LINC00963-217ENST00000624009 EHMT1Q9H9B1 1298 aa14.3□□□□□ -0.12
LINC00963-217ENST00000624009 BARHL2Q9NY43 387 aa14.3□□□□□ -0.12
LINC00963-217ENST00000624009 CYP46A1Q9Y6A2 500 aa14.3□□□□□ -0.12
LINC00963-217ENST00000624009 ESYT2A0FGR8 921 aa14.29□□□□□ -0.12
LINC00963-217ENST00000624009 SPDYE3A6NKU9 549 aa14.29□□□□□ -0.12
LINC00963-217ENST00000624009 SPATA31C2B4DYI2 1134 aa14.29□□□□□ -0.12
LINC00963-217ENST00000624009 FIBPO43427 364 aa14.29□□□□□ -0.12
LINC00963-217ENST00000624009 MYL3P08590 195 aa14.29□□□□□ -0.12
LINC00963-217ENST00000624009 PTGS1P23219 599 aa14.29□□□□□ -0.12
LINC00963-217ENST00000624009 ITGB8P26012 769 aa14.29□□□□□ -0.12
LINC00963-217ENST00000624009 CDC27P30260 824 aa14.29□□□□□ -0.12
LINC00963-217ENST00000624009 FPGSQ05932 587 aa14.29□□□□□ -0.12
LINC00963-217ENST00000624009 PPIGQ13427 754 aaKnown RBP eCLIP14.29□□□□□ -0.12
LINC00963-217ENST00000624009 PFKFB3Q16875 520 aaPredicted RBP14.29□□□□□ -0.12
LINC00963-217ENST00000624009 WWC2Q6AWC2 1192 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms