RNA–Protein interactions for RNA: ENST00000622829.4

GTF2IP1-210, Transcript of general transcription factor IIi pseudogene 1, humanhuman

TSL 1 (best) BASIC

Gene GTF2IP1, Length 3,605 nt, Biotype processed transcript, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2IP1-210ENST00000622829 TMTC3Q6ZXV5 915 aa20.2■□□□□ 0.82
GTF2IP1-210ENST00000622829 KLRF2D3W0D1 207 aa20.19■□□□□ 0.82
GTF2IP1-210ENST00000622829 MEIS1O00470 390 aa20.19■□□□□ 0.82
GTF2IP1-210ENST00000622829 PRPF3O43395 683 aaKnown RBP20.19■□□□□ 0.82
GTF2IP1-210ENST00000622829 RETREG2Q8NC44 543 aa20.19■□□□□ 0.82
GTF2IP1-210ENST00000622829 PHF20Q9BVI0 1012 aa20.19■□□□□ 0.82
GTF2IP1-210ENST00000622829 RAD51CO43502 376 aa20.19■□□□□ 0.82
GTF2IP1-210ENST00000622829 KLRC1P26715 233 aa20.19■□□□□ 0.82
GTF2IP1-210ENST00000622829 ASIC2Q16515 512 aa20.19■□□□□ 0.82
GTF2IP1-210ENST00000622829 PIGBQ92521 554 aa20.19■□□□□ 0.82
GTF2IP1-210ENST00000622829 TBCKQ8TEA7 893 aa20.19■□□□□ 0.82
GTF2IP1-210ENST00000622829 STAG1Q8WVM7 1258 aa20.19■□□□□ 0.82
GTF2IP1-210ENST00000622829 PRPF6O94906 941 aaKnown RBP20.18■□□□□ 0.82
GTF2IP1-210ENST00000622829 CALM1P0DP23 149 aa20.18■□□□□ 0.82
GTF2IP1-210ENST00000622829 CALM2P0DP24 149 aa20.18■□□□□ 0.82
GTF2IP1-210ENST00000622829 CALM3P0DP25 149 aa20.18■□□□□ 0.82
GTF2IP1-210ENST00000622829 IL17AQ16552 155 aa20.18■□□□□ 0.82
GTF2IP1-210ENST00000622829 GKAP1Q5VSY0 366 aaPredicted RBP20.18■□□□□ 0.82
GTF2IP1-210ENST00000622829 SUSD4Q5VX71 490 aa20.18■□□□□ 0.82
GTF2IP1-210ENST00000622829 CLTCQ00610 1675 aaKnown RBP20.18■□□□□ 0.82
GTF2IP1-210ENST00000622829 G3V3G9 751 aa20.18■□□□□ 0.82
GTF2IP1-210ENST00000622829 NEDD9Q14511 834 aa20.18■□□□□ 0.82
GTF2IP1-210ENST00000622829 DCAF8Q5TAQ9 597 aa20.18■□□□□ 0.82
GTF2IP1-210ENST00000622829 PHLDB2Q86SQ0 1253 aa20.18■□□□□ 0.82
GTF2IP1-210ENST00000622829 IRF2BP1Q8IU81 584 aa20.18■□□□□ 0.82
GTF2IP1-210ENST00000622829 CLEC10AQ8IUN9 316 aa20.18■□□□□ 0.82
GTF2IP1-210ENST00000622829 CCDC13Q8IYE1 715 aa20.18■□□□□ 0.82
GTF2IP1-210ENST00000622829 LRRC47Q8N1G4 583 aaKnown RBP20.18■□□□□ 0.82
GTF2IP1-210ENST00000622829 FBXL5Q9UKA1 691 aa20.18■□□□□ 0.82
GTF2IP1-210ENST00000622829 CLIC2O15247 247 aa20.17■□□□□ 0.82
GTF2IP1-210ENST00000622829 OR52Z1P0C646 297 aa20.17■□□□□ 0.82
GTF2IP1-210ENST00000622829 CYP4A11Q02928 519 aa20.17■□□□□ 0.82
GTF2IP1-210ENST00000622829 HAUS3Q68CZ6 603 aa20.17■□□□□ 0.82
GTF2IP1-210ENST00000622829 CREG2Q8IUH2 290 aa20.17■□□□□ 0.82
GTF2IP1-210ENST00000622829 PYM1Q9BRP8 204 aaKnown RBP20.17■□□□□ 0.82
GTF2IP1-210ENST00000622829 SFI1A8K8P3 1242 aa20.17■□□□□ 0.82
GTF2IP1-210ENST00000622829 LONP1P36776 959 aaKnown RBP20.17■□□□□ 0.82
GTF2IP1-210ENST00000622829 VWA3BQ502W6 1294 aa20.17■□□□□ 0.82
GTF2IP1-210ENST00000622829 KIF2BQ8N4N8 673 aa20.17■□□□□ 0.82
GTF2IP1-210ENST00000622829 TBK1Q9UHD2 729 aa20.17■□□□□ 0.82
GTF2IP1-210ENST00000622829 NONOQ15233 471 aaKnown RBP eCLIP20.17■□□□□ 0.82
GTF2IP1-210ENST00000622829 CALCRLQ16602 461 aa20.17■□□□□ 0.82
GTF2IP1-210ENST00000622829 EMBQ6PCB8 327 aa20.17■□□□□ 0.82
GTF2IP1-210ENST00000622829 FNBP4Q8N3X1 1017 aaPredicted RBP20.17■□□□□ 0.82
GTF2IP1-210ENST00000622829 SLC40A1Q9NP59 571 aa20.17■□□□□ 0.82
GTF2IP1-210ENST00000622829 SAMD15Q9P1V8 674 aa20.17■□□□□ 0.82
GTF2IP1-210ENST00000622829 NPHP3-ACAD11A0A0J9YXS1 232 aa20.16■□□□□ 0.82
GTF2IP1-210ENST00000622829 SESN3P58005 492 aa20.16■□□□□ 0.82
GTF2IP1-210ENST00000622829 TRIM51Q9BSJ1 452 aa20.16■□□□□ 0.82
GTF2IP1-210ENST00000622829 ZNF263O14978 683 aa20.16■□□□□ 0.82
GTF2IP1-210ENST00000622829 CHUKO15111 745 aa20.16■□□□□ 0.82
GTF2IP1-210ENST00000622829 UBE2SQ16763 222 aa20.16■□□□□ 0.82
GTF2IP1-210ENST00000622829 CCDC84Q86UT8 332 aaPredicted RBP20.16■□□□□ 0.82
GTF2IP1-210ENST00000622829 CASKIN2Q8WXE0 1202 aa20.16■□□□□ 0.82
GTF2IP1-210ENST00000622829 SALL4Q9UJQ4 1053 aa20.16■□□□□ 0.82
GTF2IP1-210ENST00000622829 SNX24Q9Y343 169 aa20.16■□□□□ 0.82
GTF2IP1-210ENST00000622829 MAP3K15Q6ZN16 1313 aa20.16■□□□□ 0.82
GTF2IP1-210ENST00000622829 ENO4A6NNW6 628 aa20.16■□□□□ 0.82
GTF2IP1-210ENST00000622829 TAB3Q8N5C8 712 aaPredicted RBP20.16■□□□□ 0.82
GTF2IP1-210ENST00000622829 GDAP1Q8TB36 358 aa20.16■□□□□ 0.82
GTF2IP1-210ENST00000622829 MYCBPAPQ8TBZ2 947 aa20.16■□□□□ 0.82
GTF2IP1-210ENST00000622829 ISCA1Q9BUE6 129 aa20.16■□□□□ 0.82
GTF2IP1-210ENST00000622829 VIPAS39Q9H9C1 493 aa20.16■□□□□ 0.82
GTF2IP1-210ENST00000622829 PAX7P23759 505 aa20.15■□□□□ 0.82
GTF2IP1-210ENST00000622829 ANKS4BQ8N8V4 417 aa20.15■□□□□ 0.82
GTF2IP1-210ENST00000622829 PPP1R12CQ9BZL4 782 aa20.15■□□□□ 0.82
GTF2IP1-210ENST00000622829 SH2D4AQ9H788 454 aa20.15■□□□□ 0.82
GTF2IP1-210ENST00000622829 C6orf50Q9HD87 102 aa20.15■□□□□ 0.82
GTF2IP1-210ENST00000622829 PKD2L1Q9P0L9 805 aa20.15■□□□□ 0.82
GTF2IP1-210ENST00000622829 L3MBTL1Q9Y468 752 aa20.15■□□□□ 0.82
GTF2IP1-210ENST00000622829 PCDH11XQ9BZA7 1347 aa20.15■□□□□ 0.82
GTF2IP1-210ENST00000622829 PCDH11YQ9BZA8 1340 aa20.15■□□□□ 0.82
GTF2IP1-210ENST00000622829 A0A1B0GUA9 196 aa20.15■□□□□ 0.82
GTF2IP1-210ENST00000622829 SPDYE3A6NKU9 549 aa20.15■□□□□ 0.82
GTF2IP1-210ENST00000622829 CHMP2AO43633 222 aa20.15■□□□□ 0.82
GTF2IP1-210ENST00000622829 SRGNP10124 158 aa20.15■□□□□ 0.82
GTF2IP1-210ENST00000622829 MDH1P40925 334 aaKnown RBP20.15■□□□□ 0.82
GTF2IP1-210ENST00000622829 NT5DC1Q5TFE4 455 aa20.15■□□□□ 0.82
GTF2IP1-210ENST00000622829 LRRN2O75325 713 aa20.15■□□□□ 0.82
GTF2IP1-210ENST00000622829 SLC16A2P36021 539 aa20.15■□□□□ 0.82
GTF2IP1-210ENST00000622829 PAPD7Q5XG87 772 aaKnown RBP20.15■□□□□ 0.82
GTF2IP1-210ENST00000622829 PDXDC2PQ6P474 469 aa20.15■□□□□ 0.82
GTF2IP1-210ENST00000622829 ZSCAN29Q8IWY8 852 aaPredicted RBP20.15■□□□□ 0.82
GTF2IP1-210ENST00000622829 STK36Q9NRP7 1315 aa20.14■□□□□ 0.82
GTF2IP1-210ENST00000622829 SEMA3EO15041 775 aa20.14■□□□□ 0.82
GTF2IP1-210ENST00000622829 ATP6V1G3Q96LB4 118 aa20.14■□□□□ 0.82
GTF2IP1-210ENST00000622829 PREX1Q8TCU6 1659 aa20.14■□□□□ 0.81
GTF2IP1-210ENST00000622829 ZNF76P36508 570 aa20.14■□□□□ 0.81
GTF2IP1-210ENST00000622829 TRIP13Q15645 432 aaPredicted RBP20.14■□□□□ 0.81
GTF2IP1-210ENST00000622829 VPS36Q86VN1 386 aa20.14■□□□□ 0.81
GTF2IP1-210ENST00000622829 CYFIP2Q96F07 1278 aa20.14■□□□□ 0.81
GTF2IP1-210ENST00000622829 RSRC1Q96IZ7 334 aaKnown RBP20.14■□□□□ 0.81
GTF2IP1-210ENST00000622829 THAP9Q9H5L6 903 aa20.14■□□□□ 0.81
GTF2IP1-210ENST00000622829 PNMA2Q9UL42 364 aa20.14■□□□□ 0.81
GTF2IP1-210ENST00000622829 RFX7Q2KHR2 1363 aa20.14■□□□□ 0.81
GTF2IP1-210ENST00000622829 PBX1P40424 430 aa20.14■□□□□ 0.81
GTF2IP1-210ENST00000622829 CCDC63Q8NA47 563 aa20.14■□□□□ 0.81
GTF2IP1-210ENST00000622829 PIGSQ96S52 555 aa20.14■□□□□ 0.81
GTF2IP1-210ENST00000622829 TRIM9Q9C026 710 aa20.14■□□□□ 0.81
GTF2IP1-210ENST00000622829 EPN3Q9H201 632 aa20.14■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms